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Effect of sleep deprivation on the human metabolome
Open accessAbstract
Significance: Sleep restriction and circadian clock disruption are associated with metabolic disorders including obesity and diabetes; this association can be studied by using the powerful tool of metabolomics. By using liquid chromatography/MS metabolomics, we have characterized plasma metabolites that were significantly affected by acute sleep deprivation (mainly lipids and acylcarnitines), all increasing during sleep deprivation. Observed increased levels of serotonin, tryptophan, and taurine may explain the antidepressive effect of sleep deprivation and deserve further study. Clear daily rhythms were observed in most metabolites, with 24 h wakefulness mainly reducing the amplitude of these rhythms. Our results further the understanding of sleep/wake regulation and the associated metabolic processes, and will be vital when using metabolic profiling to identify robust biomarkers for disease states and drug efficacy.
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In the citing paper
“In the acute SR study22, only increases in lipid levels were observed after the deprivation period, while in the partial SR study23 also declines were recorded.”
From Prolonged sleep restriction induces changes in pathways involved in cholesterol metabolism and inflammatory responses (2016) · cites this paper as [22]
In the citing paper
“these three independent studies point out that restriction of sleep, either acutely or partially for a longer period, significantly affects serum lipid levels, as measured using mass spectrometry.”
From Prolonged sleep restriction induces changes in pathways involved in cholesterol metabolism and inflammatory responses (2016) · cites this paper as [22]
In the citing paper
“In both studies, the majority of the altered, identified species, consisted of lipid species (including phospholipids, sphingolipids, acylcarnitides and phosphatidylcholines).”
From Prolonged sleep restriction induces changes in pathways involved in cholesterol metabolism and inflammatory responses (2016) · cites this paper as [22]
In the citing paper
“Two recent studies have measured lipid profiles in human blood samples using mass spectrometry analysis after polar and non-polar extraction of the samples after a short term (24 h) total sleep restriction22 and a partial sleep restriction for five days23.”
From Prolonged sleep restriction induces changes in pathways involved in cholesterol metabolism and inflammatory responses (2016) · cites this paper as [22]
In the citing paper
“Recent work indicates that total sleep deprivation induces a measurable perturbation to the blood metabolome (19)”
From Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt (2015) · cites this paper as [19]
In the citing paper
“Trp is a major precursor for serotonin and melatonin and is elevated under acute total sleep deprivation (19).”
From Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt (2015) · cites this paper as [19]
In the citing paper
“Twelve of these were common between the two studies, including PCs (32:1, 36:6, 38:4, 38:2, 38:3), lysoPCs (14:0, 16:1, 17:0), and acylcarnitines (C5:0, C10:0, C12:0).”
From Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt (2015) · cites this paper as [19]
In the citing paper
“In both studies, Trp was also elevated.”
From Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt (2015) · cites this paper as [19]
In the citing paper
“All of the above-mentioned metabolites were elevated in the acute sleep deprivation study.”
From Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt (2015) · cites this paper as [19]
In the citing paper
“The study of Davies et al. (19) identified metabolites that increased but found none that decreased under total sleep deprivation.”
From Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt (2015) · cites this paper as [19]
In the citing paper
“Here we have identified decreases in a number metabolites as a function of SR, which were not part of the analytical platform used in the Davies et al. study (19).”
From Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt (2015) · cites this paper as [19]
In the citing paper
“In addition to these mouse studies, human metabolome analyses also reveal that up to 20% of detectable metabolites in matrices such as plasma and saliva exhibit daily rhythms (44)(45)(46).”
From Circadian rhythms, metabolism, and chrononutrition in rodents and humans (2016) · cites this paper as [46]
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Citations
Cites
The Chronic Fatigue Syndrome: A Comprehensive Approach to Its Definition and Study
Fukuda, K., Straus, S. E., Hickie, I., Sharpe, M. C., Dobbins, J. G., Komaroff, A., & and International Chronic Fatigue Syndrome Study Group. (1994) · Annals of Internal Medicine · doi:10.7326/0003-4819-121-12-199412150-00009 · Cited by 4,969 · cited 1×
“Similarly low serum acylcarnitine levels have been measured in patients with chronic fatigue syndrome (46), another condition with reported sleep problems (47), and L-carnitine administration has also shown some benefit in reducing fatigue (48).”
BackgroundTwo-Process Model of Sleep Regulation
Binder, M. D., Hirokawa, N., & Windhorst, U. (2008) · Springer eBooks · doi:10.1007/978-3-540-29678-2_6166 · Cited by 3,900
Adverse metabolic and cardiovascular consequences of circadian misalignment
Scheer, F. A. J. L., Hilton, M. F., Mantzoros, C. S., & Shea, S. A. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0808180106 · Cited by 2,351
Central and Peripheral Circadian Clocks in Mammals
Mohawk, J. A., Green, C. B., & Takahashi, J. S. (2012) · Annual Review of Neuroscience · doi:10.1146/annurev-neuro-060909-153128 · Cited by 2,265
Cappuccio, F. P., Cooper, D., D'Elia, L., Strazzullo, P., & Miller, M. A. (2011) · European Heart Journal · doi:10.1093/eurheartj/ehr007 · Cited by 2,146
Circadian integration of metabolism and energetics
Bass, J., & Takahashi, J. S. (2010) · Science · doi:10.1126/science.1195027 · Cited by 1,910
Sleep loss: a novel risk factor for insulin resistance and type 2 diabetes
Spiegel, K., Knutson, K., Leproult, R., Tasali, E., & Cauter, E. V. (2005) · Journal of Applied Physiology · doi:10.1152/japplphysiol.00660.2005 · Cited by 1,175
A functional genomics strategy that uses metabolome data to reveal the phenotype of silent mutations
Raamsdonk, L. M., Teusink, B., Broadhurst, D., Zhang, N., Hayes, A., Walsh, M. C., BERDEN, J. A., Brindle, K. M., Kell, D. B., Rowland, J. J., et al. (2001) · Nature Biotechnology · doi:10.1038/83496 · Cited by 1,021
Green, C. B., Takahashi, J. S., & Bass, J. (2008) · Cell · doi:10.1016/j.cell.2008.08.022 · Cited by 902
Metabolic Phenotyping in Health and Disease
Holmes, E. C., Wilson, I. D., & Nicholson, J. K. (2008) · Cell · doi:10.1016/j.cell.2008.08.026 · Cited by 846
Pharmaco-metabonomic phenotyping and personalized drug treatment
Andrew Clayton, T., Lindon, J. C., Cloarec, O., Antti, H., Charuel, C., Hanton, G., Provost, J.-P., Le Net, J.-L., Baker, D., Walley, R. J., et al. (2006) · Nature · doi:10.1038/nature04648 · Cited by 824 · cited 2×
“Proc Natl Acad Sci USA 109(14):5541–5546.”
BackgroundCircadian rhythms, sleep, and metabolism
Huang, W., Ramsey, K. M., Marcheva, B., & Bass, J. T. (2011) · Journal of Clinical Investigation · doi:10.1172/jci46043 · Cited by 749
Harmonics of Circadian Gene Transcription in Mammals
Hughes, M. E., DiTacchio, L., Hayes, K. R., Vollmers, C., Pulivarthy, S. R., Baggs, J. E., Panda, S., & Hogenesch, J. B. (2009) · PLoS Genetics · doi:10.1371/journal.pgen.1000442 · Cited by 689
Wu, J. C., & Bunney, W. E. (1990) · American Journal of Psychiatry · doi:10.1176/ajp.147.1.14 · Cited by 614
Serotonin control of sleep-wake behavior
Monti, J. M. (2011) · Sleep Medicine Reviews · doi:10.1016/j.smrv.2010.11.003 · Cited by 614
Role of selective serotonin reuptake inhibitors in psychiatric disorders: a comprehensive review
Vaswani, M., Linda, F. K., & Ramesh, S. (2003) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/s0278-5846(02)00338-x · Cited by 612
Möller-Levet, C. S., Archer, S. N., Bucca, G., Laing, E. E., Slak, A., Kabiljo, R., Lo, J. C. Y., Santhi, N., von Schantz, M., Smith, C. P., et al. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1217154110 · Cited by 576
The human circadian metabolome
Dallmann, R., Viola, A. U., Tarokh, L., Cajochen, C., & Brown, S. A. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1114410109 · Cited by 566
Metabolism and the Circadian Clock Converge
Eckel‐Mahan, K. L., & Sassone‐Corsi, P. (2013) · Physiological Reviews · doi:10.1152/physrev.00016.2012 · Cited by 550
Sleep deprivation in depression: what do we know, where do we go?
Wirz-Justice, A., & Van den Hoofdakker, R. H. (1999) · Biological Psychiatry · doi:10.1016/s0006-3223(99)00125-0 · Cited by 429
Mistimed sleep disrupts circadian regulation of the human transcriptome
Archer, S. N., Laing, E. E., Möller-Levet, C. S., van der Veen, D. R., Bucca, G., Lazar, A. S., Santhi, N., Slak, A., Kabiljo, R., von Schantz, M., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1316335111 · Cited by 386
Coordination of the transcriptome and metabolome by the circadian clock
Eckel‐Mahan, K. L., Patel, V. R., Mohney, R. P., Vignola, K. S., Baldi, P., & Sassone‐Corsi, P. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1118726109 · Cited by 380
Homer1a is a core brain molecular correlate of sleep loss
Maret, S., Dorsaz, S., Gurcel, L., Pradervand, S., Petit, B., Pfister, C., Hagenbüchle, O., O’Hara, B. F., Franken, P., & Tafti, M. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0710131104 · Cited by 375
Circadian rhythm in rat pineal serotonin and its modifications by estrous cycle and photoperiod
Quay, W. B. (1963) · General and Comparative Endocrinology · doi:10.1016/0016-6480(63)90079-0 · Cited by 359
Serotonin a la carte: Supplementation with the serotonin precursor 5-hydroxytryptophan
Turner, E. H., Loftis, J. M., & Blackwell, A. D. (2005) · Pharmacology & Therapeutics · doi:10.1016/j.pharmthera.2005.06.004 · Cited by 327
Measurement of internal body time by blood metabolomics
Minami, Y., Kasukawa, T., Kakazu, Y., Iigo, M., Sugimoto, M., Ikeda, S., Yasui, A., van der Horst, G. T. J., Soga, T., & Ueda, H. R. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0900617106 · Cited by 263
Human blood metabolite timetable indicates internal body time
Kasukawa, T., Sugimoto, M., Hida, A., Minami, Y., Mori, M., Honma, S., Honma, K.-I., Mishima, K., Soga, T., & Ueda, H. R. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1207768109 · Cited by 211
Hinard, V., Mikhail, C., Pradervand, S., Curie, T., Houtkooper, R. H., Auwerx, J. H., Franken, P., & Tafti, M. (2012) · Journal of Neuroscience · doi:10.1523/jneurosci.2306-12.2012 · Cited by 209
Altamura, C., Maes, M., Dai, J., & Meltzer, H. Y. (1995) · European Neuropsychopharmacology · doi:10.1016/0924-977x(95)00033-l · Cited by 193
Taurine Is a Potent Activator of Extrasynaptic GABA A Receptors in the Thalamus
Jia, F., Yue, M. E., Chandra, D., Keramidas, A., Goldstein, P. A., Homanics, G. E., & Harrison, N. L. (2008) · Journal of Neuroscience · doi:10.1523/jneurosci.3996-07.2008 · Cited by 171
Deficiency in short-chain fatty acid β-oxidation affects theta oscillations during sleep
Tafti, M., Petit, B., Chollet, D., Neidhart, E., de Bilbao, F., Kiss, J. Z., Wood, P. A., & Franken, P. (2003) · Nature Genetics · doi:10.1038/ng1174 · Cited by 151
Hereditary Mental Depression and Parkinsonism With Taurine Deficiency
Perry, T. L., Bratty, P. J. A., Hansen, S., Kennedy, J. L., Urquhart, N., & Dolman, C. L. (1975) · Archives of Neurology · doi:10.1001/archneur.1975.00490440058009 · Cited by 141
Ang, J. E., Revell, V., Mann, A., Mäntele, S., Otway, D. T., Johnston, J. D., Thumser, A. E., Skene, D. J., & Raynaud, F. (2012) · Chronobiology International · doi:10.3109/07420528.2012.699122 · Cited by 138
Self-citationEffect of sleep deprivation on rhythms of clock gene expression and melatonin in humans
Ackermann, K., Plomp, R., Lao, O., Middleton, B., Revell, V. L., Skene, D. J., & Kayser, M. (2013) · Chronobiology International · doi:10.3109/07420528.2013.784773 · Cited by 116
Self-citationRhythmic Nucleotide Synthesis in the Liver: Temporal Segregation of Metabolites
Fustin, J., Doi, M., Yamada, H., Komatsu, R., Shimba, S., & Okamura, H. (2012) · Cell Reports · doi:10.1016/j.celrep.2012.03.001 · Cited by 112
Bass, J. T., & Turek, F. W. (2005) · Archives of Internal Medicine · doi:10.1001/archinte.165.1.15 · Cited by 99
The sleep relay—the role of the thalamus in central and decentral sleep regulation
Coulon, P., Budde, T., & Pape, H. (2011) · Pflügers Archiv - European Journal of Physiology · doi:10.1007/s00424-011-1014-6 · Cited by 87
Plasma amino acid responses in humans to evening meals of differing nutritional composition
Ashley, D., Barclay, D., Chauffard-Alboucq, F. A., Moënnoz, D., & Leathwood, P. D. (1982) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/36.1.143 · Cited by 82
Amantadine and L-Carnitine Treatment of Chronic Fatigue Syndrome
Plioplys, A. V., & Plioplys, S. (2008) · Neuropsychobiology · doi:10.1159/000119325 · Cited by 81
Peñalva, R. G., Lancel, M., Flachskamm, C., Reul, J. M. H. M., Holsboer, F., & Linthorst, A. C. E. (2003) · European Journal of Neuroscience · doi:10.1046/j.1460-9568.2003.02612.x · Cited by 79
Sleep Deprivation Increases Cerebral Serotonin 2A Receptor Binding in Humans
Elmenhorst, D., Kroll, T., Matusch, A., & Bauer, A. (2012) · SLEEP · doi:10.5665/sleep.2230 · Cited by 79
Fukushima, H., Miwa, Y., Ida, E., Kuriyama, S., Toda, K., Shimomura, Y., Sugiyama, A., Sugihara, J., Tomita, E., & Moriwaki, H. (2003) · Journal of Parenteral and Enteral Nutrition · doi:10.1177/0148607103027005315 · Cited by 63
Connecting cellular metabolism to circadian clocks
Rey, G., & Reddy, A. B. (2013) · Trends in Cell Biology · doi:10.1016/j.tcb.2013.01.003 · Cited by 60
Miyagawa, T., Kawamura, H., Obuchi, M., Ikesaki, A., Ozaki, A., Tokunaga, K., Inoue, Y., & Honda, M. (2013) · PLoS ONE · doi:10.1371/journal.pone.0053707 · Cited by 50
Abnormally Low Serum Acylcarnitine Levels in Narcolepsy Patients
Miyagawa, T., Miyadera, H., Tanaka, S., Kawashima, M., Shimada, M., Honda, Y., Tokunaga, K., & Honda, M. (2011) · SLEEP · doi:10.1093/sleep/34.3.349 · Cited by 46
Neurochemical and electrophysiological changes induced by paradoxical sleep deprivation in rats
Mohammed, H. S., Ezz, H. S. A., Khadrawy, Y. A., & Noor, N. A. (2011) · Behavioural Brain Research · doi:10.1016/j.bbr.2011.06.018 · Cited by 45
Kuratsune, H., Yamaguti, K., Lindh, G., Evengard, B., Takahashi, M., Machii, T., Matsumura, K., 高石, 穣., Kawata, S., Långström, B., et al. (1998) · International Journal of Molecular Medicine · doi:10.3892/ijmm.2.1.51 · Cited by 43
Wheler, G. H. T., Weller, J. L., & Klein, D. C. (1979) · Brain Research · doi:10.1016/0006-8993(79)90650-4 · Cited by 33
Free amino acids in the pineal and pituitary glands of human brain
Vellan, E. J., Gjessing, L. R., & Stalsberg, H. (1970) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.1970.tb00551.x · Cited by 30
Coppen, A. J., Noguera, R., & Shaw, D. (1970) · The Lancet · doi:10.1016/s0140-6736(70)92774-1 · Cited by 24
Alfaro-Rodríguez, A., González-Piña, R., González-Maciel, A., & Arch-Tirado, E. (2006) · Brain Research · doi:10.1016/j.brainres.2006.06.069 · Cited by 15
Research works printed but not linked: 1
- 10.1002/1520-6394(2000)12:1 <2::AID-DA2>3.0.CO;2-4 · DOI
Cited by
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Touitou, Y., Reinberg, A., & Touitou, D. (2017) · Life Sciences · doi:10.1016/j.lfs.2017.02.008 · Cited by 738
Circadian Rhythm and Sleep Disruption: Causes, Metabolic Consequences, and Countermeasures
Potter, G. D., Skene, D. J., Arendt, J., Cade, J. E., Grant, P. J., & Hardie, L. J. (2016) · Endocrine Reviews · doi:10.1210/er.2016-1083 · Cited by 781
Self-citationSleep deficiency and chronic pain: potential underlying mechanisms and clinical implications
Haack, M., Simpson, N. S., Sethna, N. F., Kaur, S., & Mullington, J. M. (2019) · Neuropsychopharmacology · doi:10.1038/s41386-019-0439-z · Cited by 696
Association between circadian rhythms and neurodegenerative diseases
Leng, Y., Musiek, E. S., Hu, K., Cappuccio, F. P., & Yaffe, K. S. (2019) · The Lancet Neurology · doi:10.1016/s1474-4422(18)30461-7 · Cited by 677
Wright, K. P., Drake, A. L., Frey, D. J., Fleshner, M., Desouza, C. A., Gronfier, C., & Czeisler, C. A. (2015) · Brain, Behavior, and Immunity · doi:10.1016/j.bbi.2015.01.004 · Cited by 567
Metadata
- Authors
- Davies, S. K., Ang, J. E., Revell, V. L., Holmes, B., Mann, A., Robertson, F. P., Cui, N., Middleton, B., Ackermann, K., Kayser, M., Thumser, A. E., Raynaud, F. I., & Skene, D. J.
- Affiliations
- University of Surrey (GB)
- Institute of Cancer Research (GB)
- Faculty of Health and Medical Sciences, University of Surrey, Guildford GU2 7XH, United Kingdom;
- Erasmus MC (NL)
- ORCID
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2014-07-07
- Volume
- 111
- Issue
- 29
- Pages
- 10761-10766
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC4115565
- OpenAlex
- W2027141772
- Cited by
- 527
- References
- 52
- Citations by year
- 2026: 22 · 2025: 52 · 2024: 47 · 2023: 57 · 2022: 39 · 2021: 49 · 2020: 39 · 2019: 54 · 2018: 51 · 2017: 42 · 2016: 36 · 2015: 37 · 2014: 1
- FWCI
- 19.01
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- EUR Research Repository (Erasmus University Rotterdam) (publishedVersion)
- Surrey Research Insight Open Access (The University of Surrey) (submittedVersion)
- EUR Research Repository (Erasmus University Rotterdam) (submittedVersion)
- RePub (Erasmus University Rotterdam) (submittedVersion, other-oa)
- Funders
- Cancer Research UK (11566)
- Biotechnology and Biological Sciences Research Council (BB/I019405/1)
- Topics
- Life Sciences › Neuroscience › Endocrine and Autonomic Systems › Circadian rhythm and melatonin
- Social Sciences › Psychology › Experimental and Cognitive Psychology › Sleep and Work-Related Fatigue
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Metabolomics and Mass Spectrometry Studies
- Keywords
- sleep deprivation, plasma metabolites, circadian rhythm, sleep-wake cycle, metabolomics, tryptophan, serotonin, taurine, acylcarnitines, glycerophospholipids, sphingolipids
- MeSH terms
- Humans, Male, Sleep Deprivation, Multivariate Analysis, Principal Component Analysis, Metabolomics, Metabolome
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