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The SrrAB two-component system regulates Staphylococcus aureus pathogenicity through redox sensitive cysteines

Tiwari, Nitija, López-Redondo, Marisa, Miguel-Romero, Laura, Kulhankova, Katarina, Cahill, Michael P., Tran, Phuong M., Kinney, Kyle J., Kilgore, Samuel H., Al-Tameemi, Hassan, Herfst, Christine A., Tuffs, Stephen W., Kirby, John R., Boyd, Jeffery M., McCormick, John K., Salgado-Pabón, Wilmara, Marina, Alberto, Schlievert, Patrick M., Fuentes, Ernesto J.·2020·Proceedings of the National Academy of Sciences

Abstract

Staphylococcus aureus infections can lead to diseases that range from localized skin abscess to life-threatening toxic shock syndrome. The SrrAB two-component system (TCS) is a global regulator of S. aureus virulence and critical for survival under environmental conditions such as hypoxic, oxidative, and nitrosative stress found at sites of infection. Despite the critical role of SrrAB in S. aureus pathogenicity, the mechanism by which the SrrAB TCS senses and responds to these environmental signals remains unknown. Bioinformatics analysis showed that the SrrB histidine kinase contains several domains, including an extracellular Cache domain and a cytoplasmic HAMP-PAS-DHp-CA region. Here, we show that the PAS domain regulates both kinase and phosphatase enzyme activity of SrrB and present the structure of the DHp-CA catalytic core. Importantly, this structure shows a unique intramolecular cysteine disulfide bond in the ATP-binding domain that significantly affects autophosphorylation kinetics. In vitro data show that the redox state of the disulfide bond affects S. aureus biofilm formation and toxic shock syndrome toxin-1 production. Moreover, with the use of the rabbit infective endocarditis model, we demonstrate that the disulfide bond is a critical regulatory element of SrrB function during S. aureus infection. Our data support a model whereby the disulfide bond and PAS domain of SrrB sense and respond to the cellular redox environment to regulate S. aureus survival and pathogenesis.

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Research works printed but not linked: 70

  1. J. L. Nouwen, M. W. J. A. Fieren, S. Snijders, H. A. Verbrugh, A. van Belkum, Persistent (not intermittent) nasal carriage of Staphylococcus aureus is the determinant of CPD-related infections. Kidney Int. 67, 1084–1092 (2005). · DOI
  2. G. Muthukrishnan ., Longitudinal genetic analyses of Staphylococcus aureus nasal carriage dynamics in a diverse population. BMC Infect. Dis. 13, 221 (2013). · DOI
  3. S. Bronner, H. Monteil, G. Prévost, Regulation of virulence determinants in Staphylococcus aureus: Complexity and applications. FEMS Microbiol. Rev. 28, 183–200 (2004). · DOI · Paper page
  4. M. K. Park, R. A. Myers, L. Marzella, Oxygen tensions and infections: Modulation of microbial growth, activity of antimicrobial agents, and immunologic responses. Clin. Infect. Dis. 14, 720–740 (1992). · DOI · Paper page
  5. R. A. Ross, A. B. Onderdonk, Production of toxic shock syndrome toxin 1 by Staphylococcus aureus requires both oxygen and carbon dioxide. Infect. Immun. 68, 5205–5209 (2000). · DOI
  6. J. M. Yarwood, P. M. Schlievert, Oxygen and carbon dioxide regulation of toxic shock syndrome toxin 1 production by Staphylococcus aureus MN8. J. Clin. Microbiol. 38, 1797–1803 (2000). · DOI
  7. K. E. Beenken ., Global gene expression in Staphylococcus aureus biofilms. J. Bacteriol. 186, 4665–4684 (2004). · DOI · Paper page
  8. M. Ulrich ., The staphylococcal respiratory response regulator SrrAB induces ica gene transcription and polysaccharide intercellular adhesin expression, protecting Staphylococcus aureus from neutrophil killing under anaerobic growth conditions. Mol. Microbiol. 65, 1276–1287 (2007). · DOI · Paper page
  9. A. M. Stock, V. L. Robinson, P. N. Goudreau, Two-component signal transduction. Annu. Rev. Biochem. 69, 183–215 (2000). · DOI · Paper page
  10. A. F. Haag, F. Bagnoli, The role of two-component signal transduction systems in Staphylococcus aureus virulence regulation. Curr. Top. Microbiol. Immunol. 409, 145–198 (2017).
  11. E. A. Groisman, Feedback control of two-component regulatory systems. Annu. Rev. Microbiol. 70, 103–124 (2016). · DOI · Paper page
  12. P. Casino, V. Rubio, A. Marina, The mechanism of signal transduction by two-component systems. Curr. Opin. Struct. Biol. 20, 763–771 (2010). · DOI · Paper page
  13. J. M. Yarwood, J. K. McCormick, P. M. Schlievert, Identification of a novel two-component regulatory system that acts in global regulation of virulence factors of Staphylococcus aureus. J. Bacteriol. 183, 1113–1123 (2001). · DOI · Paper page
  14. J. P. Throup ., The srhSR gene pair from Staphylococcus aureus: Genomic and proteomic approaches to the identification and characterization of gene function. Biochemistry 40, 10392–10401 (2001). · DOI
  15. Y. Wu ., Staphylococcus epidermidis SrrAB regulates bacterial growth and biofilm formation differently under oxic and microaerobic conditions. J. Bacteriol. 197, 459–476 (2015). · DOI
  16. A. A. Pragman, J. M. Yarwood, T. J. Tripp, P. M. Schlievert, Characterization of virulence factor regulation by SrrAB, a two-component system in Staphylococcus aureus. J. Bacteriol. 186, 2430–2438 (2004). · DOI · Paper page
  17. A. D. Wilde ., Bacterial hypoxic responses revealed as critical determinants of the host-pathogen outcome by TnSeq analysis of Staphylococcus aureus invasive infection. PLoS Pathog. 11, e1005341 (2015). · DOI · Paper page
  18. T. L. Kinkel, C. M. Roux, P. M. Dunman, F. C. Fang, The Staphylococcus aureus SrrAB two-component system promotes resistance to nitrosative stress and hypoxia. MBio 4, e00696-13 (2013). · DOI · Paper page
  19. I. H. Windham, S. S. Chaudhari, J. L. Bose, V. C. Thomas, K. W. Bayles, SrrAB modulates Staphylococcus aureus cell death through regulation of cidABC transcription. J. Bacteriol. 198, 1114–1122 (2016). · DOI · Paper page
  20. A. A. Mashruwala, J. M. Boyd, The Staphylococcus aureus SrrAB regulatory system modulates hydrogen peroxide resistance factors, which imparts protection to aconitase during aerobic growth. PLoS One 12, e0170283 (2017). · DOI
  21. A. A. Mashruwala, A. V. Guchte, J. M. Boyd, Impaired respiration elicits SrrAB-dependent programmed cell lysis and biofilm formation in Staphylococcus aureus. eLife 6, e23845 (2017). · DOI · Paper page
  22. J. W. Willett, J. R. Kirby, CrdS and CrdA comprise a two-component system that is cooperatively regulated by the Che3 chemosensory system in Myxococcus xanthus. mBio 2, e00110-11 (2011). · doi:10.1128/mbio.00110-11
  23. J. B. Stock, A. J. Ninfa, A. M. Stock, Protein phosphorylation and regulation of adaptive responses in bacteria. Microbiol. Rev. 53, 450–490 (1989). · doi:10.1128/mr.53.4.450-490.1989 · Paper page
  24. D. J. Kim, S. Forst, Genomic analysis of the histidine kinase family in bacteria and archaea. Microbiology 147, 1197–1212 (2001). · DOI
  25. A. Marina, C. D. Waldburger, W. A. Hendrickson, Structure of the entire cytoplasmic portion of a sensor histidine-kinase protein. EMBO J. 24, 4247–4259 (2005). · DOI · Paper page
  26. F. Jacob-Dubuisson, A. Mechaly, J. M. Betton, R. Antoine, Structural insights into the signalling mechanisms of two-component systems. Nat. Rev. Microbiol. 16, 585–593 (2018). · DOI · Paper page
  27. M. P. Bhate, K. S. Molnar, M. Goulian, W. F. DeGrado, Signal transduction in histidine kinases: Insights from new structures. Structure 23, 981–994 (2015). · DOI · Paper page
  28. P. Casino, L. Miguel-Romero, A. Marina, Visualizing autophosphorylation in histidine kinases. Nat. Commun. 5, 3258 (2014). · DOI
  29. P. Casino, V. Rubio, A. Marina, Structural insight into partner specificity and phosphoryl transfer in two-component signal transduction. Cell 139, 325–336 (2009). · DOI · Paper page
  30. A. J. Sporer, L. J. Kahl, A. Price-Whelan, L. E. P. Dietrich, Redox-based regulation of bacterial development and behavior. Annu. Rev. Biochem. 86, 777–797 (2017). · DOI
  31. R. Malpica, B. Franco, C. Rodriguez, O. Kwon, D. Georgellis, Identification of a quinone-sensitive redox switch in the ArcB sensor kinase. Proc. Natl. Acad. Sci. U.S.A. 101, 13318–13323 (2004). · DOI · Paper page
  32. S. K. Burley ., RCSB protein data bank: Biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy. Nucleic Acids Res. 47, D464–D474 (2019). · DOI · Paper page
  33. D. A. Blomster-Hautamaa, P. M. Schlievert, Preparation of toxic shock syndrome toxin-1. Methods Enzymol. 165, 37–43 (1988). · DOI
  34. W. Salgado-Pabón, P. M. Schlievert, Aortic valve damage for the study of left-sided, native valve infective endocarditis in rabbits. Methods Mol. Biol. 1396, 73–80 (2016). · doi:10.1007/978-1-4939-3344-0_6
  35. E. Härtig, D. Jahn, Regulation of the anaerobic metabolism in Bacillus subtilis. Adv. Microb. Physiol. 61, 195–216 (2012). · DOI
  36. A. F. Alvarez, C. Rodriguez, D. Georgellis, Ubiquinone and menaquinone electron carriers represent the yin and yang in the redox regulation of the ArcB sensor kinase. J. Bacteriol. 195, 3054–3061 (2013). · doi:10.1128/jb.00406-13
  37. D. Georgellis, O. Kwon, E. C. Lin, S. M. Wong, B. J. Akerley, Redox signal transduction by the ArcB sensor kinase of Haemophilus influenzae lacking the PAS domain. J. Bacteriol. 183, 7206–7212 (2001). · doi:10.1128/jb.183.24.7206-7212.2001
  38. L. R. Swem, X. Gong, C. A. Yu, C. E. Bauer, Identification of a ubiquinone-binding site that affects autophosphorylation of the sensor kinase RegB. J. Biol. Chem. 281, 6768–6775 (2006). · DOI
  39. L. R. Swem ., Signal transduction by the global regulator RegB is mediated by a redox-active cysteine. EMBO J. 22, 4699–4708 (2003). · DOI
  40. J. Wu, C. E. Bauer, RegB kinase activity is controlled in part by monitoring the ratio of oxidized to reduced ubiquinones in the ubiquinone pool. mBio 1, e00272-10 (2010). · doi:10.1128/mbio.00272-10
  41. J. Wu ., RegB kinase activity is repressed by oxidative formation of cysteine sulfenic acid. J. Biol. Chem. 288, 4755–4762 (2013). · doi:10.1074/jbc.m112.413492
  42. D. Georgellis, O. Kwon, E. C. Lin, Quinones as the redox signal for the arc two-component system of bacteria. Science 292, 2314–2316 (2001). · DOI · Paper page
  43. R. Malpica, G. R. P. Sandoval, C. Rodríguez, B. Franco, D. Georgellis, Signaling by the arc two-component system provides a link between the redox state of the quinone pool and gene expression. Antioxid. Redox Signal. 8, 781–795 (2006). · DOI
  44. D. Georgellis, O. Kwon, P. De Wulf, E. C. Lin, Signal decay through a reverse phosphorelay in the arc two-component signal transduction system. J. Biol. Chem. 273, 32864–32869 (1998). · DOI
  45. C. S. Stach ., Novel tissue level effects of the Staphylococcus aureus enterotoxin gene cluster are essential for infective endocarditis. PLoS One 11, e0154762 (2016). · DOI
  46. J. W. Chung ., Superantigen profiling of Staphylococcus aureus infective endocarditis isolates. Diagn. Microbiol. Infect. Dis. 79, 119–124 (2014). · doi:10.1016/j.diagmicrobio.2014.03.009
  47. J. J. Nienaber .; International Collaboration on Endocarditis-Microbiology Investigators, Methicillin-susceptible Staphylococcus aureus endocarditis isolates are associated with clonal complex 30 genotype and a distinct repertoire of enterotoxins and adhesins. J. Infect. Dis. 204, 704–713 (2011). · DOI
  48. R. Bentley, R. Meganathan, Biosynthesis of vitamin K (menaquinone) in bacteria. Microbiol. Rev. 46, 241–280 (1982). · doi:10.1128/mr.46.3.241-280.1982 · Paper page
  49. A. D. Gutu, K. J. Wayne, L. T. Sham, M. E. Winkler, Kinetic characterization of the WalRKSpn (VicRK) two-component system of Streptococcus pneumoniae: Dependence of WalKSpn (VicK) phosphatase activity on its PAS domain. J. Bacteriol. 192, 2346–2358 (2010). · DOI
  50. J. S. Parkinson, Signaling mechanisms of HAMP domains in chemoreceptors and sensor kinases. Annu. Rev. Microbiol. 64, 101–122 (2010). · DOI · Paper page
  51. M. A. Gilles-Gonzalez, G. Gonzalez, Regulation of the kinase activity of heme protein FixL from the two-component system FixL/FixJ of Rhizobium meliloti. J. Biol. Chem. 268, 16293–16297 (1993). · doi:10.1016/s0021-9258(19)85419-4
  52. A. Rebbapragada ., The Aer protein and the serine chemoreceptor Tsr independently sense intracellular energy levels and transduce oxygen, redox, and energy signals for Escherichia coli behavior. Proc. Natl. Acad. Sci. U.S.A. 94, 10541–10546 (1997). · DOI · Paper page
  53. V. M. Delgado-Nixon, G. Gonzalez, M. A. Gilles-Gonzalez, Dos, a heme-binding PAS protein from Escherichia coli, is a direct oxygen sensor. Biochemistry 39, 2685–2691 (2000). · DOI · Paper page
  54. M. A. Sobran, P. A. Cotter, The BvgS PAS domain, an independent sensory perception module in the Bordetella bronchiseptica BvgAS phosphorelay. J. Bacteriol. 201, e00286-19 (2019). · doi:10.1128/jb.00286-19
  55. P. M. Schlievert ., Menaquinone analogs inhibit growth of bacterial pathogens. Antimicrob. Agents Chemother. 57, 5432–5437 (2013). · DOI
  56. J. W. Willett, J. R. Kirby, Genetic and biochemical dissection of a HisKA domain identifies residues required exclusively for kinase and phosphatase activities. PLoS Genet. 8, e1003084 (2012). · DOI
  57. S. Doublie, Preparation of selenomethionyl proteins for phase determination. Methods Enzymol. 276, 523–530 (1997). · DOI · Paper page
  58. A. G. Leslie, The integration of macromolecular diffraction data. Acta Crystallogr. D Biol. Crystallogr. 62, 48–57 (2006). · DOI · Paper page
  59. T. C. Terwilliger, J. Berendzen, Automated MAD and MIR structure solution. Acta Crystallogr. D Biol. Crystallogr. 55, 849–861 (1999). · DOI · Paper page
  60. M. D. Winn ., Overview of the CCP4 suite and current developments. Acta Crystallogr. D Biol. Crystallogr. 67, 235–242 (2011). · DOI · Paper page
  61. P. Emsley, K. Cowtan, Coot: Model-building tools for molecular graphics. Acta Crystallogr. D Biol. Crystallogr. 60, 2126–2132 (2004). · DOI · Paper page
  62. G. N. Murshudov, A. A. Vagin, E. J. Dodson, Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr. D Biol. Crystallogr. 53, 240–255 (1997). · DOI · Paper page
  63. A. T. Brünger ., Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr. 54, 905–921 (1998). · DOI · Paper page
  64. S. F. Altschul, W. Gish, W. Miller, E. W. Myers, D. J. Lipman, Basic local alignment search tool. J. Mol. Biol. 215, 403–410 (1990). · doi:10.1016/s0022-2836(05)80360-2 · Paper page
  65. J. Huerta-Cepas, F. Serra, P. Bork, ETE 3: Reconstruction, analysis, and visualization of phylogenomic data. Mol. Biol. Evol. 33, 1635–1638 (2016). · DOI · Paper page
  66. R. M. Corrigan, T. J. Foster, An improved tetracycline-inducible expression vector for Staphylococcus aureus. Plasmid 61, 126–129 (2009). · DOI · Paper page
  67. I. R. Monk, J. J. Tree, B. P. Howden, T. P. Stinear, T. J. Foster, Complete bypass of restriction systems for major Staphylococcus aureus lineages. MBio 6, e00308-15 (2015). · DOI · Paper page
  68. A. A. Mashruwala, C. M. Gries, T. D. Scherr, T. Kielian, J. M. Boyd, SaeRS is responsive to cellular respiratory status and regulates fermentative biofilm formation in Staphylococcus aureus. Infect. Immun. 85, IAI.00157-17 (2017). · DOI · Paper page
  69. P. M. Schlievert ., Alpha and beta chains of hemoglobin inhibit production of Staphylococcus aureus exotoxins. Biochemistry 46, 14349–14358 (2007). · DOI
  70. W. Salgado-Pabón ., Superantigens are critical for Staphylococcus aureus Infective endocarditis, sepsis, and acute kidney injury. mBio 4, e00494-13 (2013). · DOI

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Metadata

Authors
Tiwari, N., López-Redondo, M., Miguel-Romero, L., Kulhankova, K., Cahill, M. P., Tran, P. M., Kinney, K. J., Kilgore, S. H., Al-Tameemi, H., Herfst, C. A., Tuffs, S. W., Kirby, J. R., Boyd, J. M., McCormick, J. K., Salgado-Pabón, W., Marina, A., Schlievert, P. M., & Fuentes, E. J.
Affiliations
  • Department of Biochemistry, University of Iowa, Iowa City, IA 52242;
  • Instituto de Biomedicina de Valencia, Consejo Superior de Investigaciones Científicas (IBV-CSIC), 46010 Valencia, Spain;
  • Department of Microbiology and Immunology, University of Iowa, Iowa City, IA 52242;
  • Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, NJ 08901-8525;
  • Department of Microbiology and Immunology, Western University, London, ON N6A 5C1, Canada;
  • Department of Microbiology and Immunology, Medical College of Wisconsin, Milwaukee, WI 53226
Venue
Proceedings of the National Academy of Sciences
Published
2020-04-30
Volume
117
Issue
20
Pages
10989-10999
ISSN
  • 0027-8424
  • 1091-6490
Cited by
88
References
0
Language
en
Funders
  • HHS | NIH | National Institute of Allergy and Infectious Diseases (AI135305, AI139100-01, AI134692-03)
  • Canadian Institutes of Health Research (PJT-166050)
  • Ministerio de Economía y Competitividad (BIO2016-78751-P)

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Tiwari, N., López-Redondo, M., Miguel-Romero, L., Kulhankova, K., Cahill, M. P., Tran, P. M., Kinney, K. J., Kilgore, S. H., Al-Tameemi, H., Herfst, C. A., Tuffs, S. W., Kirby, J. R., Boyd, J. M., McCormick, J. K., Salgado-Pabón, W., Marina, A., Schlievert, P. M., & Fuentes, E. J. (2020). The SrrAB two-component system regulates Staphylococcus aureus pathogenicity through redox sensitive cysteines. Proceedings of the National Academy of Sciences. https://doi.org/10.1073/pnas.1921307117

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