Caenorhabditis elegans embryonic axial patterning requires two recently discovered posterior-group Hox genes
Open accessAbstract
Hox genes encode highly conserved transcription factors that control regional identities of cells and tissues along the developing anterior-posterior axis, probably in all bilaterian metazoans. However, in invertebrate embryos other than Drosophila, Hox gene functions remain largely unknown except by inference from sequence similarities and expression patterns. Recent genomic sequencing has shown that Caenorhabditis elegans has three Hox genes of the posterior paralog group [Ruvkun, G. & Hobert, O. (1998) Science 282, 2033-2041]. However, only one has been previously identified genetically, and it is not required for embryonic development [Chisholm, A. (1991) Development (Cambridge, U.K.) 111, 921-932]. Herein, we report identification of the remaining two posterior paralogs as the nob-1 gene and the neighboring php-3 gene. Elimination of nob-1 and php-3 functions causes gross embryonic defects in both posterior patterning and morphogenetic movements of the posterior hypodermis, as well as posterior-to-anterior cell fate transformations and lethality. The only other Hox gene essential for embryogenesis is the labial/Hox1 homolog ceh-13, required for more anterior patterning [Brunschwig, K., Wittmann, C., Schnabel, R., Burglin, T. R., Tobler, H. & Muller, F. (1999) Development (Cambridge, U.K.) 126, 1537-1546]. Therefore, essential embryonic patterning in C. elegans requires only Hox genes of the anterior and posterior paralog groups, raising interesting questions about evolution of the medial-group genes.
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In Caenorhabditis elegans, essential embryonic patterning requires only Hox genes from the anterior and posterior paralog groups.
“In Caenorhabditis elegans, essential embryonic patterning requires only Hox genes from the anterior (PG-1) and posterior (PG-9,13) paralog groups (Van Auken et al., 2000).”
From Conservation of Hox/ParaHox-Related Genes in the Early Development of a Cnidarian (2001) · cites this paper as Van Auken et al., 2000
Cites
Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
Fire, A., Xu, S., Montgomery, M. K., Kostas, S. A., Driver, S. E., & Mello, C. C. (1998) · Nature · doi:10.1038/35888 · Cited by 15,429 · see citing works
THE GENETICS OF CAENORHABDITIS ELEGANS
Brenner, S. (1974) · Genetics · doi:10.1093/genetics/77.1.71 · Cited by 14,984 · see citing works
Genome Sequence of the Nematode C. elegans : A Platform for Investigating Biology
Berg, J. (1998) · Science · doi:10.1126/science.282.5396.2012 · Cited by 4,458 · see citing works
The embryonic cell lineage of the nematode Caenorhabditis elegans
Sulston, J. E., Schierenberg, E., White, J. G., & Thomson, J. N. (1983) · Developmental Biology · doi:10.1016/0012-1606(83)90201-4 · Cited by 4,199 · see citing works
The Nematode Caenorhabditis elegans
Wood, W. B. (1988) · Cold Spring Harbor Laboratory eBooks · Cited by 2,821 · see citing works
Self-citationEvidence for a clade of nematodes, arthropods and other moulting animals
Aguinaldo, A. M. A., Turbeville, J. M., Linford, L. S., Rivera, M. C., Garey, J. R., Raff, R. A., & Lake, J. A. (1997) · Nature · doi:10.1038/387489a0 · Cited by 1,609 · see citing works
Cloning the Differences Between Two Complex Genomes
Lisitsyn, N. A., Lisitsyn, N., & Wigler, M. H. (1993) · Science · doi:10.1126/science.8438152 · Cited by 1,290 · see citing works
Early animal evolution: emerging views from comparative biology and geology
Knoll, A. H., & Carroll, S. B. (1999) · Science · doi:10.1126/science.284.5423.2129 · Cited by 821 · see citing works
Caenorhabditis elegans : modern biological analysis of an organism
Epstein, H. F., & Diane, C. S. (1995) · Cited by 685 · see citing works
RNAi in C. elegans : Soaking in the Genome Sequence
Tabara, H., Grishok, A., & Mello, C. C. (1998) · Science · doi:10.1126/science.282.5388.430 · Cited by 647 · see citing works
A trans-spliced leader sequence on actin mRNA in C. elegans
Krause, M., & Hirsh, D. (1987) · Cell · doi:10.1016/0092-8674(87)90613-1 · Cited by 643 · see citing works
RNA as a target of double-stranded RNA-mediated genetic interference in Caenorhabditis elegans
Montgomery, M. K., Xu, S., & Fire, A. Z. (1998) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.95.26.15502 · Cited by 580 · see citing works
Hox genes in brachiopods and priapulids and protostome evolution
de Rosa, R., Grenier, J. K., Andreeva, T., Cook, C. E., Adoutte, A., Akam, M., Carroll, S. B., & Balavoine, G. (1999) · Nature · doi:10.1038/21631 · Cited by 541 · see citing works
A genetic mapping system in Caenorhabditis elegans based on polymorphic sequence-tagged sites.
Williams, B. D., Schrank, B., Huynh, C., Shownkeen, R. C., & Waterston, R. (1992) · Genetics · doi:10.1093/genetics/131.3.609 · Cited by 498 · see citing works
Caenorhabditis elegans morphogenesis: The role of the cytoskeleton in elongation of the embryo
Priess, J. R., & Hirsh, D. (1986) · Developmental Biology · doi:10.1016/0012-1606(86)90358-1 · Cited by 438 · see citing works
A homeotic gene cluster patterns the anteroposterior body axis of C. elegans
Wang, B., Muller-Immerglück, M. M., Austin, J., Robinson, N., Chisholm, A. D., & Kenyon, C. J. (1993) · Cell · doi:10.1016/0092-8674(93)90292-x · Cited by 315 · see citing works
The Taxonomy of Developmental Control in <i>Caenorhabditis elegans</i>
Ruvkun, G., & Hobert, O. (1998) · Science · doi:10.1126/science.282.5396.2033 · Cited by 305 · see citing works
Control of cell fates in the central body region of C. elegans by the homeobox gene lin-39
Clark, S. G., Chisholm, A. D., & Horvitz, H. R. (1993) · Cell · doi:10.1016/0092-8674(93)90293-y · Cited by 261 · see citing works
Operons as a common form of chromosomal organization in C. elegans
Zorio, D. A. R., Cheng, N. N., Blumenthal, T., et al. (1994) · Nature · doi:10.1038/372270a0 · Cited by 246 · see citing works
Double-stranded RNA as a mediator in sequence-specific genetic silencing and co-suppression
Montgomery, M. K., & Fire, A. Z. (1998) · Trends in Genetics · doi:10.1016/s0168-9525(98)01510-8 · Cited by 235 · see citing works
Hunter, C. P., & Kenyon, C. J. (1996) · Cell · doi:10.1016/s0092-8674(00)81340-9 · Cited by 224 · see citing works
A class act: conservation of homeodomain protein functions
Manak, J. R., & Scott, M. P. (1994) · Development · doi:10.1242/dev.1994.supplement.61 · Cited by 209 · see citing works
Chapter 13 Blastomere Culture and Analysis
Edgar, L. G. (1995) · Methods in cell biology · doi:10.1016/s0091-679x(08)61393-x · Cited by 151 · see citing works
Self-citationControl of cell fate in the tail region of C. elegans by the gene egl-5
Chisholm, A. D. (1991) · Development · doi:10.1242/dev.111.4.921 · Cited by 135 · see citing works
Four-Dimensional Imaging: Computer Visualization of 3D Movements in Living Specimens
Thomas, C., DeVries, P., Hardin, J. D., et al. (1996) · Science · doi:10.1126/science.273.5275.603 · Cited by 132 · see citing works
Trimethylpsoralen induces small deletion mutations inCaenorhabditis elegans.
Yandell, M. D., Edgar, L. G., & Wood, W. B. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.4.1381 · Cited by 121 · see citing works
Self-citationA Cluster of Antennapedia -Class Homeobox Genes in a Nonsegmented Animal
Kenyon, C. J., & Wang, B. (1991) · Science · doi:10.1126/science.1677487 · Cited by 91 · see citing works
Bürglin, T. R., Ruvkun, G., Coulson, A. R., Hawkins, N., McGhee, J. D., Schaller, D., Wittmann, C., Müller, F., & Waterston, R. (1991) · Nature · doi:10.1038/351703a0 · Cited by 70 · see citing works
Anterior organization of theCaenorhabditis elegansembryo by thelabial-likeHoxgeneceh-13
Brunschwig, K., Wittmann, C., Schnabel, R., Bürglin, T. R., Tobler, H., & Müller, F. (1999) · Development · doi:10.1242/dev.126.7.1537 · Cited by 69 · see citing works
Wrischnik, L. A., & Kenyon, C. J. (1997) · Development · doi:10.1242/dev.124.15.2875 · Cited by 68 · see citing works
Cnidarian homeoboxes and the zootype
Martínez, D. E., Bridge, D., Masuda-Nakagawa, L. M., & Cartwright, P. (1998) · Nature · doi:10.1038/31616 · Cited by 66 · see citing works
Flagged first, then by citations
- Authors
- Van Auken, K., Weaver, D. C., Edgar, L. G., & Wood, W. B.
- Affiliations
- Department of Molecular, Cellular, and Developmental Biology, University of Colorado, Boulder, CO 80309-0347
- University of Colorado Boulder (US)
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2000-04-25
- Volume
- 97
- Issue
- 9
- Pages
- 4499-4503
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC18263
- OpenAlex
- W2133523759
- Cited by
- 89
- References
- 31
- Citations by year
- 2024: 3 · 2023: 4 · 2022: 4 · 2020: 1 · 2019: 3 · 2018: 2 · 2017: 2 · 2016: 1 · 2015: 1 · 2014: 2 · 2013: 1 · 2012: 5
- FWCI
- 3.13
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health
- Eunice Kennedy Shriver National Institute of Child Health and Human Development (R01HD014958, HD-14958)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Axon Guidance and Neuronal Signaling
- Keywords
- Hox genes, anterior-posterior axis, morphogenetic movements, Caenorhabditis elegans, Hox gene evolution
- MeSH terms
- Amino Acid Sequence, Animals, Cloning, Molecular, Drosophila, Embryo, Nonmammalian, Genes, Homeobox, Molecular Sequence Data, Transcription Factors, Sequence Alignment, Caenorhabditis elegans, Sequence Homology, Amino Acid, Protein Structure, Secondary, Body Patterning, Genes, Essential, Caenorhabditis elegans Proteins
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