Conservation of Hox/ParaHox-Related Genes in the Early Development of a Cnidarian
Open accessAbstract
To clarify the relationship between axial patterning in cnidarians and bilaterians, we have investigated the embryonic development of the hydrozoan Podocoryne carnea. The expression of Hox-like homeobox genes was analyzed by RT-PCR and in situ hybridization. Cnox1-Pc, an anterior Hox gene, is a maternal message. It is present throughout larval development, first weakly in all blastomeres and later restricted mostly to the anterior pole of the planula. Gsx, an anterior ParaHox gene, is first seen in the anterior endoderm but also extends into posterior regions. Cnox4-Pc, an orphan Hox-like gene, is expressed in the egg as a ring-shaped cloud around the germinal vesicle. After fertilization, the message remains in most animal blastomeres. When the embryo elongates in late blastula, staining is restricted to a few cells at the posterior pole where gastrulation will start. However, once gastrulation starts, the Cnox4-Pc signal disappears and is absent in later stages of larval development. Phylogenetic analysis shows that not all cnidarian Hox-like genes have recognizable orthologues in bilaterian groups. However, the expression analysis of Cnox1-Pc and Gsx correlates to some extent with the expression pattern of cognate genes of bilaterians, confirming the conservation of genes involved in organizing animal body plans and their putative common ancestral origin.
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- Findingown data
In all larval stages, Gsx staining remains much stronger in the anterior endoderm.
“Nevertheless, in all larval stages, the staining remains much stronger in the anterior endoderm.”
Quote in the paperNot a substantial claim - Findingown data
Gsx signal later extends into posterior regions.
“It is first expressed in the developing anterior endoderm (Figs.5D and 5E); later the signal extends also to the posterior region (Figs.5F and 5G).”
Quote in the paperNot a substantial claim - Findingown data
During cleavage, Cnox1-Pc expression is weak and uniform in all blastomeres.
“It is present throughout larval development, first weakly in all blastomeres and later restricted mostly to the anterior pole of the planula.”
- Also stated in: § Differential Expression of Hox-Like Genes during Embryogenesis · boosted
“In situ hybridization analysis demonstrates a weak staining localized in the central cytoplasm of the egg and blastomeres (Figs.4A-4C).”
Quote in the paperNot a substantial claim - Also stated in: § Differential Expression of Hox-Like Genes during Embryogenesis · boosted
- Findingown data
In the first cleavage, Cnox4-Pc message remains localized at the animal pole.
“In the first cleavage, which in Podocoryne is unilateral and occurs where the polar bodies are formed (Freeman, 1981), the message remains localized at the animal pole (Figs.6D and 6E).”
Quote in the paperNot a substantial claim - Findingown data
Cnox1-Pc message is continuously present from the unfertilized egg through cleavage stages to the planula larva.
“The RT-PCR data demonstrate the continuous presence of the Cnox1-Pc message from the unfertilized egg throughout the cleavage stages up to the formation of the planula larva (Fig. 3).”
Quote in the paperSubstantial claim
- Findingown data
Gsx is first expressed in the developing anterior endoderm.
“It is first expressed in the developing anterior endoderm (Figs.5D and 5E); later the signal extends also to the posterior region (Figs.5F and 5G).”
Quote in the paperNot a substantial claim - Findingown data
Cnox1-Pc is a maternal transcript in Podocoryne carnea.
“Cnox1-Pc, an anterior Hox gene, is a maternal message.”
- Also stated in: § Differential Expression of Hox-Like Genes during Embryogenesis · boosted
“The RT-PCR data demonstrate the continuous presence of the Cnox1-Pc message from the unfertilized egg throughout the cleavage stages up to the formation of the planula larva (Fig. 3).”
Quote in the paperSubstantial claim - Also stated in: § Differential Expression of Hox-Like Genes during Embryogenesis · boosted
- Findingown data
In later cleavage stages, Cnox4-Pc message remains in a few, mostly 4-8 adjacent cells at one pole, presumably the animal pole.
“In the 8-cell stage, the message is found only in the animal pole quartet (Fig. 6F) and in all later cleavage stages the message remains in few, mostly 4 -8 adjacent cells at one pole (Fig. 6G), presumably the animal pole of the embryo.”
Quote in the paperNot a substantial claim - Findingown data
Cnox4-Pc message is present from the unfertilized egg until gastrulation.
“RT-PCR analysis of Cnox4-Pc expression shows that the message is present from the unfertilized egg until gastrula-tion (Fig. 3).”
Quote in the paperSubstantial claim - Findingown data
In unfertilized and fertilized eggs, Cnox4-Pc message is located at the animal pole as a ring-shaped cloud around the nucleus.
“In the unfertilized and fertilized egg, the message is located at the animal pole where it forms a ring-shaped cloud around the nucleus (Figs.6A-6C).”
- Also stated in: § Abstract · plain
“Cnox4-Pc, an orphan Hox-like gene, is expressed in the egg as a ring-shaped cloud around the germinal vesicle.”
Quote in the paperNot a substantial claim - Also stated in: § Abstract · plain
- Findingown data
In the 8-cell stage, Cnox4-Pc message is found only in the animal pole quartet.
“In the 8-cell stage, the message is found only in the animal pole quartet (Fig. 6F) and in all later cleavage stages the message remains in few, mostly 4 -8 adjacent cells at one pole (Fig. 6G), presumably the animal pole of the embryo.”
Quote in the paperNot a substantial claim - Findingown data
Gsx expression persists after the larva settles and transforms into a feeding polyp.
“Gsx expression persists once the larva has settled and transformed into a feeding polyp (Fig. 3).”
Quote in the paperNot a substantial claim - Findingown data
Cnox1-Pc message is completely absent in polyps.
“and is completely absent in the polyps (Fig. 3).”
Quote in the paperNot a substantial claim - Findingown data
Not all cnidarian Hox-like genes have recognizable orthologues in bilaterian groups.
“Phylogenetic analysis shows that not all cnidarian Hox-like genes have recognizable orthologues in bilaterian groups.”
Quote in the paperSubstantial claim - Findingcitation
Similarities in the homeodomain and N terminus of Gsx with bilaterian sequences confirm that ParaHox genes are present in cnidarians.
“In the case of Gsx, similarities inside the homeodomain and at the N terminus of the protein (not shown) with corresponding sequences from bilaterians confirm once more that ParaHox genes are present in cnidarians (Gauchat et al., 2000;Kourakis and Martindale, 2000).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites Gauchat et al., 2000 source
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- cites Kourakis and Martindale, 2000
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- Findingown data
During gastrulation, Cnox4-Pc staining vanishes.
“During gastrulation, the staining vanishes and is found neither in the mature larva nor in the feeding polyp (Fig. 6I).”
Quote in the paperNot a substantial claim - Findingcitation
Gsx is a representative of the ParaHox gene Gsx.
“They are clearly representatives of the ParaHox gene Gsx (Fig. 2C) (Hayward et al., 2001).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Hayward et al., 2001 source
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- Findingown data
In older planula, Cnox1-Pc message strongly decreases.
“In the older planula, the message strongly decreases (Fig. 4G)”
Quote in the paperNot a substantial claim - Findingnone given
Data from Podocoryne and other cnidarians indicate the absence of middle-group Hox genes (PG-4,8; Dfd/abdA).
“Data from Podocoryne and other cnidarians indicate the absence of”
Quote in the paperSubstantial claim - Findingown data
Cnox1-Pc has a maternal message.
“However, a more sensitive analysis demonstrates the presence of a maternal message and a signal throughout planula development.”
Quote in the paperNot a substantial claim - Findingcitation
The Cnox4-Pc homeodomain carries diagnostic amino acids K4, R10, and D29, indicating some relatedness to posterior Hox genes of PG-9,10.
“The Cnox4-Pc homeodomain carries those diagnostic amino acids (K4, R10, D29), therefore it has some relatedness with the”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Gauchat et al., 2000 source
Not checked in the free run.
- Findingown data
The Cnox1-Pc homeodomain shares PG-1-specific amino acids F8, Q10, K11, H21, F22, K24, and A29.
“Indeed the Cnox1-Pc homeodomain shares the PG-1-specific amino acids: F8, Q10, K11, H21, F22, K24, A29 (Fig. 1B).”
Quote in the paperSubstantial claim - Findingown data
Phylogenetic analysis places Cnox1-Pc, Gsx, and Cnox4-Pc in the Hox/ParaHox-related class.
“The addition of non-Hox genes in the analysis shows that Cnox1-Pc, Gsx, and Cnox4-Pc are likely to belong to the class of the Hox/ParaHox-related genes (Fig. 2).”
Quote in the paperSubstantial claim - Findingown data
Cnox1-Pc signal is present throughout planula development.
“However, a more sensitive analysis demonstrates the presence of a maternal message and a signal throughout planula development.”
Quote in the paperSubstantial claim - Findingown data
No additional homeobox-containing genes were found on the two genomic clones besides Cnox4-Pc and Gsx.
“Besides Cnox4-Pc and Gsx, no additional homeobox-containing genes could be found on those two genomic clones.”
Quote in the paperNot a substantial claim - Findingown data
In older larvae, Cnox1-Pc expression also extends into the posterior part.
“This extension of expression into the posterior part in older larvae is also observed in Cnox1-Pc (Fig. 4G)”
Quote in the paperNot a substantial claim - Findingown data
In later larval stages, Gsx staining gradually appears in the posterior region.
“but gradually some staining can be observed in the posterior region (Figs.5F and 5G).”
Quote in the paperNot a substantial claim - Findingown data
In ten-hour-old embryos, Cnox4-Pc staining appears in cells at the blastula's posterior pole.
“Ten-hour-old embryo; the cells at the posterior pole of the blastula stain.”
Quote in the paperSubstantial claim - Findingown data
At the 16-cell stage, Cnox4-Pc message lies in the animal quartet.
“16-cell stage embryo; the message is localized in the animal quartet.”
Quote in the paperSubstantial claim - Findingown data
In unilateral cleavage starting at the animal pole, Cnox4-Pc message is confined to the cleavage initiation site in both blastomeres.
“Unilateral cleavage from the animal pole; in both blastomeres, the message is restricted to the place where cleavage starts.”
Quote in the paperSubstantial claim - Findingown data
Cnox4-Pc message shows ring-shaped staining around the egg nucleus.
“Ring-shaped staining around the egg nucleus.”
Quote in the paperNot a substantial claim - Findingown data
Gsx expression is exclusively endodermal.
“Expression of the ParaHox gene Gsx is exclusively endodermal”
Quote in the paperSubstantial claim - Findingown data
At blastula stage, Cnox4-Pc signal remains at the animal pole.
“Blastula stage; the signal remains at the animal pole.”
Quote in the paperNot a substantial claim - Findingown data
In later larval stages, Gsx expression is strong and often very local in the anterior part of the planula.
“In later larval stages, a strong and often very local expression is maintained in the anterior part of the planula (Fig. 5E)”
Quote in the paperSubstantial claim - Findingown data
In two-day-old larva, Cnox4-Pc staining has disappeared.
“Two-day-old larva; staining has disappeared.”
Quote in the paperSubstantial claim - Findingown data
Gsx shows no staining in cleavage stages and early gastrula.
“No staining in the cleavage stages (A, B) and early gastrula (C).”
Quote in the paperNot a substantial claim - Findingown data
Gsx is also expressed in Podocoryne polyps.
“Gsx is also expressed in Podocoryne polyps (Fig. 3).”
Quote in the paperNot a substantial claim - Findingown data
Cnox4-Pc message is already asymmetrically distributed by oogenesis.
“Because the asymmetric distribution of the Cnox4-Pc message is already established in oogenesis”
Quote in the paperSubstantial claim - Findingown data
Gsx expression begins at the anterior pole as the endoderm separates from ectoderm through ECM formation, before different cell types form.
“and starts at the anterior pole when the endoderm separates from the ectoderm by the formation of the ECM (Fig. 5D), prior to formation of the different cell types.”
Quote in the paperSubstantial claim - Premisecitation
In Caenorhabditis elegans, essential embryonic patterning requires only Hox genes from the anterior and posterior paralog groups.
“In Caenorhabditis elegans, essential embryonic patterning requires only Hox genes from the anterior (PG-1) and posterior (PG-9,13) paralog groups (Van Auken et al., 2000).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Van Auken et al., 2000 source
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- Interpretationown data
The expression patterns of Cnox1-Pc and Gsx correlate to some extent with those of their cognate bilaterian genes.
“However, the expression analysis of Cnox1-Pc and Gsx correlates to some extent with the expression pattern of cognate genes of bilaterians, confirming the conservation of genes involved in organizing animal body plans and their putative common ancestral origin.”
Quote in the paperSubstantial claim - Interpretationcitation
The different use of structurally comparable genes between Podocoryne and Hydra is possibly a consequence of Podocoryne retaining the full life cycle while Hydra lost the adult medusa generation.
“and possibly the consequence of the fact that Podocoryne has retained the full life cycle, whereas Hydra has lost the adult medusa generation (Boero and Bouillon, 1987).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Boero and Bouillon, 1987
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- Premisecitation
Other regulatory and structural genes also confirm that Podocoryne and Hydra use structurally comparable genes differently.
“This is also confirmed with other regulatory and structural genes (Gro ¨ger et al., 1999;Mu ¨ller et al., 1999)”
Quote in the paperNot a substantial claim0 of 2 sources checked - Interpretationown data
The findings point to a role for the examined genes in larval axis patterning.
“However, the results suggest that the studied genes are involved in the larval axis patterning.”
Quote in the paperSubstantial claim - Interpretationreasoning
Brief presence of the Cnox1-Pc message in particular regions or cells would necessarily produce variation in staining.
“Therefore, if the message is present only for a short time in specific areas or cells, variability in staining patterns must result.”
Quote in the paperNot a substantial claim - Premisecitation
Within 28-34 hours, the fertilized Podocoryne egg develops into the bilayered planula larva with essentially all cell types seen in the polyp.
“Within 28 -34 h, the fertilized egg develops into the bilayered body structure of the planula larva with essentially all cell types seen in the polyp (Tardent, 1978;Gro ¨ger and Schmid, 2001).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites Tardent, 1978
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- cites Gro ¨ger and Schmid, 2001
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- Interpretationown data
The inability to detect Cnox1-Pc transcript in Podocoryne polyps indicates that Podocoryne and Hydra use structurally comparable genes differently.
“The fact, however, that we are unable to detect the transcript in polyps of Podocoryne indicates that the two hydrozoan species use structurally comparable genes differently.”
Quote in the paperSubstantial claim - Premisecitation
Bilaterians share a common set of regulatory genes for defining head, trunk, and posterior regions (the zootype).
“Structural and functional homologies between regulatory genes used among bilaterians indicate that, during embryogenesis, animals share a common set of genes for defining the head, trunk, and posterior regions (zootype; Slack et al., 1993).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Slack et al., 1993 source
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- Premisecitation
One group of Cnox-3 class genes shares specific amino acids with the bilaterian PG-9,10 homeodomain.
“As pointed out by Gauchat et al. (2000), one group of the Cnox-3 class genes shares specific amino acids with the homeodomain of the bilaterian PG-9,10.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Gauchat et al., 2000 source
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- Premisecitation
Cnidarian Hox-like genes are involved in patterning the oral-aboral axis during regeneration or asexual reproduction of the polyp stage.
“It has been shown that cnidarian Hox-like genes are involved in the patterning of the oral-aboral axis during regeneration or asexual reproduction of the polyp stage (Schummer et al., 1992;Shenk et al., 1993;Cartwright and Buss, 1999;Galliot 2000).”
Quote in the paperSubstantial claim0 of 3 sources checked - Premisecitation
In the sea urchin Strongylocentrotus purpuratus, only two posterior Hox genes are used to build the embryo.
“In Strongylocentrotus purpuratus (sea urchin), only two posterior Hox genes are used to build the embryo (Arenas-Mena et al., 1998).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Arenas-Mena et al., 1998 source
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- Premisecitation
Hydra endoderm forms through multipolar immigration.
“In Hydra, the endodermal layer originates by multipolar immigration (Brauer, 1891).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Brauer, 1891
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- Premisecitation
In bilaterians, PG-1 and Gsx participate in differentiation of the embryonic anterior endoderm.
“In bilaterians, PG-1 and Gsx genes are involved in the differentiation of the embryonic anterior endoderm (McGinnis and Krumlauf, 1992;Brooke et al., 1998).”
Quote in the paperSubstantial claim0 of 2 sources checked - Premisecitation
In Hydrozoa, the animal pole, where first unipolar cleavage begins, marks the future planula's posterior end (the polyp oral pole).
“In these studies, it was demonstrated convincingly that the site where the first unipolar cleavage starts (animal pole) defines the posterior end of the future planula larva (or oral pole of the polyps; Tessier, 1931;Freeman, 1981Freeman, , 1990)).”
Quote in the paperSubstantial claim0 of 3 sources checked- cites Tessier, 1931
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- cites Freeman, 1981 source
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- cites Freeman, 1990
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- Premisecitation
Antibody staining for cnox-2 protein labels all epithelial cells in both layers of Hydra.
“However, when analyzed with an antibody against the cnox-2 protein, the signal is seen in all epithelial cells of both layers (reviewed in Bode, 2001)”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Bode, 2001 source
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- Interpretationown data
Since Cnox4-Pc message asymmetry exists by oogenesis, axis specification via cytoplasmic redistribution after sperm entry seems unnecessary.
“Because the asymmetric distribution of the Cnox4-Pc message is already established in oogenesis, the specification of body axis through redistribution of cytoplasm after sperm entry, as postulated by Goldstein and Freeman (1997), appears not necessary.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Goldstein and Freeman (1997)
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- Interpretationreasoning
Gsx function seems conserved during embryonic development in Podocoryne and bilaterians.
“Thus, Gsx function appears to be conserved in the embryonic development of Podocoryne and bilaterians.”
Quote in the paperSubstantial claim- Rests on an assumption: The Gsx of Podocoryne corresponds to Hydra cnox-2 and Acropora millepora cnox-2Am.
- Interpretationreasoning
The expression patterns suggest that this Cnox-1 family gene's function in embryonic A-P axis patterning is conserved.
“and the expression patterns indicate that the role of this gene in patterning the embryonic A-P axis is conserved.”
Quote in the paperSubstantial claim- Rests on an assumption: Cnox-1 family members are related to labial, the Drosophila anterior Hox gene.
- Interpretationreasoning
Comparing the hydrozoan body axis directly with the A-P axis of through-gut animals is uninformative.
“For this reason, the direct comparison of the hydrozoan body axis to that of the A-P axis of the through-gut animals is not informative.”
Quote in the paperNot a substantial claim - Premisecitation
In radially symmetric cnidarians and biradially symmetric Ctenophora, the egg's animal pole becomes the larva's posterior pole.
“In the so-called radially symmetric cnidarian and the biradially symmetric Ctenophora, the animal pole of the egg will give rise to the posterior pole of the larva (Tessier, 1931;Mergner, 1971;Freeman, 1981).”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites Tessier, 1931
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- cites Mergner, 1971
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- cites Freeman, 1981 source
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- Interpretationcitation
Cnox4-Pc message localization agrees with experimental work on posterior pole formation in Hydrozoa.
“The localized distribution of the Cnox4-Pc message (Fig. 6) corresponds well with an experimental analysis of posterior pole formation in Hydrozoa.”
Quote in the paperSubstantial claim
- May combine two claims. 32
- The quote only partly states this claim. 8
- Classified as probably not a substantial claim. 17
May combine two claims.
Findingown dataIn the blastula, Cnox4-Pc signal is weaker but still localized to the pole where gastrulation starts and where the posterior pole of the larva will form.
“In the blastula stage, the embryo elongates and although the signal becomes weaker it is still clearly localized to the pole where gastrulation starts by unipolar immigration and where the posterior pole of the larva will form (Fig. 6H).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCnox4-Pc message is absent in later larval stages and in the feeding polyp.
“The message is seen neither in later larval stages nor in the feeding polyp (Fig. 3).”
Quote in the paperSubstantial claimMay combine two claims.
FindingcitationIn older planulae, Cnox1-Pc signal decreases and is absent in the polyp.
“In the older planula, the signal is decreasing and is absent in the polyp (Fig. 3; Aerne et al., 1995).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Aerne et al., 1995
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May combine two claims.
Findingown dataGsx is not expressed before endoderm forms; its expression begins after gastrulation.
“RT-PCR and in situ hybridization analysis show that Gsx is expressed after gastrulation (Figs. 3 and 5).”
- Also stated in: § INTRODUCTION · plain
“Gsx, however, is not expressed before the endoderm forms and from then on persists throughout larval development, mostly in the anterior endoderm.”
Quote in the paperSubstantial claim- Also stated in: § INTRODUCTION · plain
May combine two claims. The quote only partly states this claim.
Findingown dataIn the planula, Cnox1-Pc expression is prominent at the anterior pole and stains both anterior ectoderm and endoderm.
“In the planula larva, both the anterior ectoderm and endoderm stain (Figs.4D-4F).”
- Also stated in: § INTRODUCTION · plain
“In the planula, expression is prominent at the anterior pole.”
Quote in the paperSubstantial claim- Also stated in: § INTRODUCTION · plain
May combine two claims.
Findingown dataA total of 23 sequenced clones represented fragments of four homeobox genes; two were Cnox1-Pc and Cnox2-Pc, and two were new sequences named Cnox4-Pc and Gsx.
“A total of 23 individual clones were sequenced representing fragments of four homeobox genes.”
- Also stated in: § Isolation and Characterization of Cnox4-Pc and Gsx · plain
“Two were previously characterized: Cnox1-Pc (Aerne et al., 1995) and Cnox2-Pc (Masuda-Nakagawa et al., 2000), and two were new sequences, later named Cnox4-Pc and Gsx.”
Quote in the paperSubstantial claim- Also stated in: § Isolation and Characterization of Cnox4-Pc and Gsx · plain
May combine two claims. The quote only partly states this claim.
Findingown dataCnox1-Pc is related to paralog group 1 and clusters with human HOXA1 and Drosophila labial.
“As previously described, Cnox1-Pc is related to the paralog group 1 (PG-1) (Aerne et al., 1995;Martinez et al., 1998;Kuhn et al., 1999;Gauchat et al., 2000).”
- Also stated in: § Hox, ParaHox, and Orphan Hox-Like Genes in Podocoryne · plain
“The Podocoryne sequence is closely related to the antpC sequence from Acropora formosa (Fig. 2), and both cluster with human HOXA1 and Drosophila labial.”
Quote in the paperSubstantial claim- Also stated in: § Hox, ParaHox, and Orphan Hox-Like Genes in Podocoryne · plain
May combine two claims.
Findingown dataIn developing planula, Cnox1-Pc signal becomes strong and more locally restricted, with anterior ectoderm and endoderm staining.
“the signal becomes strong and more locally restricted in the developing planula where the anterior ectoderm and the endoderm stain (Figs.4D-4F).”
Quote in the paperSubstantial claimMay combine two claims. The quote only partly states this claim.
Findingown dataThe Cnox4-Pc genomic clone is 15.7 kb and contains two introns upstream of the homeobox.
“Subsequent screens of a genomic library led to the characterization of one clone of 15.7 kb for Cnox4-Pc and 14 kb for Gsx.”
- Also stated in: § Isolation and Characterization of Cnox4-Pc and Gsx · plain
“Cnox4-Pc displays two introns located upstream of the homeobox, whereas the Gsx gene contains only one intron.”
Quote in the paperNot a substantial claim- Also stated in: § Isolation and Characterization of Cnox4-Pc and Gsx · plain
May combine two claims.
Findingown dataIn eggs and blastomeres, Cnox1-Pc staining is weak and located in the central cytoplasm.
“Whereas some weak staining is observed in the central cytoplasm of the egg and blastomeres (Figs.4A-4C)”
Quote in the paperNot a substantial claimMay combine two claims. The quote only partly states this claim.
Findingown dataGsx cDNA is 901 bp, with an open reading frame of 798 bp encoding 266 amino acids.
“The compilation of the 5Ј and 3Ј RACE gave rise to a 1201-bp sequence for Cnox4-Pc and to a 901-bp sequence for Gsx.”
- Also stated in: § Isolation and Characterization of Cnox4-Pc and Gsx · plain
“Analysis of the two sequences revealed open reading frames of 1068 bp and 798 bp, respectively, and predicted amino acid sequences of 356 and 266 amino acids.”
Quote in the paperNot a substantial claim- Also stated in: § Isolation and Characterization of Cnox4-Pc and Gsx · plain
May combine two claims.
Findingnone givenLarval development within a batch is asynchronous; first cleavage times can vary by over 2 h.
“Within each batch of larvae, development is not synchronized, even the time of first cleavage can differ for more than 2 h.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCnox4-Pc cDNA is 1201 bp, with an open reading frame of 1068 bp encoding 356 amino acids.
“The compilation of the 5Ј and 3Ј RACE gave rise to a 1201-bp sequence for Cnox4-Pc and to a 901-bp sequence for Gsx.”
- Also stated in: § Isolation and Characterization of Cnox4-Pc and Gsx · plain
“Analysis of the two sequences revealed open reading frames of 1068 bp and 798 bp, respectively, and predicted amino acid sequences of 356 and 266 amino acids.”
Quote in the paperNot a substantial claim- Also stated in: § Isolation and Characterization of Cnox4-Pc and Gsx · plain
May combine two claims. The quote only partly states this claim.
FindingcitationCnox4-Pc cannot be placed reliably into bilaterian groups but belongs to the heterogeneous cnidarian Cnox-3 class or Cnox-1 family.
“The situation is similar concerning Cnox4-Pc for which no obvious grouping can be seen.”
- Also stated in: § Hox, ParaHox, and Orphan Hox-Like Genes in Podocoryne · plain
“However, Cnox4-Pc is placed in the very heterogeneous cnidarian Cnox-3 class (Gauchat et al., 2000) or Cnox-1 family (Kuhn et al., 1999).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites Gauchat et al., 2000
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- cites Kuhn et al., 1999
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- Also stated in: § Hox, ParaHox, and Orphan Hox-Like Genes in Podocoryne · plain
May combine two claims.
Findingown dataThe previous classification of Cnox2-Pc as Deformed-like cannot be confirmed; its homeodomain lacks specific residues that would group it clearly with anterior or intermediate paralog groups.
“The position of Cnox2-Pc (Masuda-Nakagawa et al., 2000), previously described as a Deformed-like gene, can not be confirmed in our analysis.”
- Also stated in: § Hox, ParaHox, and Orphan Hox-Like Genes in Podocoryne · plain
“The homeodomain of Cnox2-Pc does not display specific residues that would allow to group it clearly with one of the anterior or intermediate paralog groups.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Masuda-Nakagawa et al., 2000
Not checked in the free run.
- Also stated in: § Hox, ParaHox, and Orphan Hox-Like Genes in Podocoryne · plain
May combine two claims. The quote only partly states this claim.
Findingown dataThe Gsx genomic clone is 14 kb and contains one intron.
“Subsequent screens of a genomic library led to the characterization of one clone of 15.7 kb for Cnox4-Pc and 14 kb for Gsx.”
- Also stated in: § Isolation and Characterization of Cnox4-Pc and Gsx · plain
“Cnox4-Pc displays two introns located upstream of the homeobox, whereas the Gsx gene contains only one intron.”
Quote in the paperNot a substantial claim- Also stated in: § Isolation and Characterization of Cnox4-Pc and Gsx · plain
May combine two claims.
FindingcitationCnox4-Pc belongs to the heterogeneous Cnox-3 family, which has no clear bilaterian representative.
“Classification of Cnox4-Pc is more problematic (Figs. 1 and 2), it belongs to the heterogeneous Cnox-3 family, which has no clear bilaterian representative (Sharkey et al., 1997;Gauchat et al., 2000).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites Sharkey et al., 1997
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- cites Gauchat et al., 2000
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Findingown dataCnox4-Pc message is strongly stained in the unfertilized egg and localized at the animal pole where the first polar body is given off.
“Strong staining of the unfertilized egg (B) localized at the animal pole where first polar body is given off (A).”
Quote in the paperSubstantial claimThe quote only partly states this claim.
Findingown dataPosterior expression of Gsx and Cnox1-Pc coincides with the larva becoming competent for polyp formation.
“and coincides with the competence of the larva to undergo polyp formation.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenThe RT-PCR experiments were repeated twice on two different mRNA samples.
“Experiments were repeated twice on two different mRNA samples.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductcitationThe phylogenetic tree was calculated with neighbor-joining and 1000 bootstrap replicates.
“A phylogenetic neighbor-joining tree of the homeodomains was calculated with Clustal X and 1000 bootstrap replicates (Jeanmougin et al., 1998).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Jeanmougin et al., 1998 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationIn Podocoryne, the first cleavage is unilateral and occurs where the polar bodies are formed.
“In the first cleavage, which in Podocoryne is unilateral and occurs where the polar bodies are formed (Freeman, 1981), the message remains localized at the animal pole (Figs.6D and 6E).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Freeman, 1981
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationDuring Hydra regeneration, cnox-1 is expressed in a head-specific way.
“During regeneration, the gene is expressed in a”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Gauchat et al., 2000
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenFor each gene, several primer sets were tested and selected for suitability with SYBR Green I technology.
“For each gene, several primer sets have been tested and selected to be suited for the SYBR Green I technology.”
Quote in the paperNot a substantial claimMay combine two claims.
Interpretationown dataThe conservation of genes involved in organizing animal body plans and their putative common ancestral origin is confirmed.
“However, the expression analysis of Cnox1-Pc and Gsx correlates to some extent with the expression pattern of cognate genes of bilaterians, confirming the conservation of genes involved in organizing animal body plans and their putative common ancestral origin.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationPodocoryne has three distinct life stages: a lecitotrophic planula larva, a sessile colonial polyp, and a sexual free-swimming medusa.
“Podocoryne exhibits three distinct life stages: the lecitotrophic planula larva, the sessile colonial polyp, and the sexual free-swimming medusa stage (Tardent, 1978).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Tardent, 1978
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductown dataThe expression data presented do not permit linking the function of the studied genes to the histological differentiation events discussed.
“The presented expression data do not allow to make a link between the gene function and the discussed histological differentiation events.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationEarly axis specification depends on asymmetries that are either preexisting in the egg or triggered by external cues.
“The establishment of the early axis specification relies on asymmetries, which are either preexisting in the egg or triggered by external cues (Goldstein and Freeman, 1997).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Goldstein and Freeman, 1997
Not checked in the free run.
Classified as probably not a substantial claim.
Study design and conductnone givenElongation Factor 1 alpha was used as an endogenous control to compensate for variation in the quantity and quality of the preparations.
“Elongation Factor 1␣ (EF1␣) was used as endogenous control to compensate for variations in the quantity and quality of the preparations.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationBilaterians and cnidarians diverged from their last common ancestor about 600 million years ago with the same inventory of regulatory developmental genes.
“Both groups have diverged from their last common ancestor approximately 600 million years ago with the same inventory of regulatory developmental genes as a”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Valentine et al., 1999 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationIn Hydra, cnox-1 appears to be involved in tentacle formation.
“It appears that the gene is involved in tentacle formation (Bode, 2001).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Bode, 2001
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenDIG-RNA-labeled probes were synthesized from regions excluding the homeobox.
“DIG-RNA-labeled probes were synthesized from regions excluding the homeobox (DIG-RNA labeling, Roche).”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim.
PremisecitationMany regulatory and developmental gene families known from bilaterians have representatives in cnidarians.
“Many of the regulatory and developmental gene families known from bilaterians have representatives in cnidarians (Galliot, 2000;Hobmayer et al., 2000).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites Galliot, 2000 source
Not checked in the free run.
- cites Hobmayer et al., 2000
Not checked in the free run.
May combine two claims.
Interpretationown dataAt least part of the molecular control of anterior-posterior body axis patterning is conserved between cnidarians and bilaterians and must originate from a common ancestor.
“Our data suggest that at least part of the molecular control of the A-P body axis patterning is conserved between cnidarians and bilaterians and therefore must originate from a common ancestor.”
Quote in the paperSubstantial claim- Rests on an assumption: Cnidarians have shown little change in axial complexity since Precambrian times.
May combine two claims.
PremisecitationMost Podocoryne cell types differentiate in a nonpolarized pattern, while a nerve net develops from anterior to posterior and large nematocytes differentiate only at the posterior end.
“Whereas most of these cell types differentiate in a nonpolarized pattern, a nerve net which stains positive with a tyrosine-tubulin antibody gradually develops from anterior to posterior, the large nematocytes, however, differentiate only at the posterior end (Gro ¨ger and Schmid, 2001).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Gro ¨ger and Schmid, 2001
Not checked in the free run.
May combine two claims.
PremisecitationIn Hydra, cnox-1 (or cnox-3) is found in ectoderm, weakly in the body column, a little more strongly in the hypostome, and strongly in the future head area of developing buds.
“In Hydra, cnox-1 (or cnox-3; Bode, 2001) is expressed always in the ectodermal layer, at low levels in the body column, slightly higher in the hypostome, and at high levels in the future”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites Bode, 2001
Not checked in the free run.
- cites Gauchat et al., 2000
Not checked in the free run.
The quote only partly states this claim.
InterpretationreasoningThe absence of cnidarian middle-group Hox genes correlates with the absence of middle Hox gene expression during embryogenesis in nematodes and sea urchins.
“The absence of cnidarian”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationCnox2-Pc shows graded ectodermal anterior expression.
“A graded ectodermal anterior expression is reported for Cnox2-Pc, a Hox-like gene (Masuda-Nakagawa et al., 2000).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Masuda-Nakagawa et al., 2000
Not checked in the free run.
Probably not a substantial claim: may not pass S2 (checkable), S3 (load-bearing), S4 (based).
Interpretationnone givenBody-plan comparisons face a basic limit when approaching the origin of the metazoan ancestor, probably a planula-like creature.
“A fundamental limitation of body plan comparison is reached, however, as we approach the original invention of the metazoan ancestor, most probably a planula-like creature.”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationreasoningHydrozoan embryo A-P axis definition cannot rely on gut formation and instead uses criteria such as cell-type differentiation, gene expression dynamics, body shape, and swimming behavior.
“Therefore, the definition of the A-P axis in hydrozoan embryos does not use gut formation but must rely on other criteria, like differentiation of cell types, gene expression dynamics, body shape, and swimming behavior.”
Quote in the paperSubstantial claim- Rests on an assumption: Formation of the inner cell layer in hydrozoans follows highly variable patterns without blastopore formation.
Probably not a substantial claim: may not pass S3 (load-bearing), S4 (based).
Study design and conductnone givenA direct comparison of the authors' data with Hydra embryos is not possible.
“Again, a direct comparison of our data with Hydra embryos is not possible.”
Quote in the paperNot a substantial claim- Rests on an assumption: The expression pattern of Cnox-1 (cnox-3) during Hydra embryogenesis is not known.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationIn Acropora larva, Cnox-2Am is expressed in scattered ectodermal cells, possibly a subset of neurons.
“Interestingly, Cnox-2Am is expressed in scattered ectodermal cells of the Acropora larva, possibly a subset of neurons (Hayward et al., 2001).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Hayward et al., 2001
Not checked in the free run.
May combine two claims.
Interpretationown dataClear A-P polarity appears in histology and gene expression during planula development, polyp formation and regeneration, and medusa budding.
“On the other hand, a clear A-P polarity in histology and gene expression patterns is observed in the development of the planula, in the formation and regeneration of polyps, and in budding of medusae.”
Quote in the paperSubstantial claim- Rests on an assumption: Cnidarians in sensu stricto have no head.
- Rests on an assumption: Polyps have no specific sense organs.
- Rests on an assumption: In medusae, statocysts and lens eyes may form at the bell margin, but nerve cells do not form brain-like structures.
May combine two claims.
PremisecitationIn Podocoryne, the mouth-area nervous system is net-like, with neuronal density not much higher than elsewhere in the mid body column.
“and, in Podocoryne, the nervous system in the mouth area is net-like and not much more increased in neuronal density than at other places of the mid body column (Gro ¨ger and Schmid, 2001).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Gröger and Schmid, 2001
Not checked in the free run.
May combine two claims.
PremisecitationIn Hydra, cnox-2 transcripts occur in ectoderm along the body column, in a subset of head-specific epithelial cells, and during regeneration as the polyp head differentiates.
“In Hydra, transcripts are always found in the ectodermal layer along the body column in a specific subset of head-specific epithelial cells and in regeneration when the polyp”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Gauchat et al., 2000
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitationcnox-2 may function as an inhibitor of head formation.
“and appears to act as a negative regulator of head formation (Endl et al., 1999).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Endl et al., 1999
Not checked in the free run.
May combine two claims.
InterpretationcitationRegeneration from vegetal half embryos suggests either an undetected Cnox4-Pc gradient in the vegetal region or other genes ensuring normal development in those half embryos.
“On the other hand, the reported full regeneration from vegetal half embryos (Freeman, 1990) indicates that either a gradient of some undetected Cnox4-Pc message extends into the vegetal part or that this or other genes are used to guarantee normal development in the regenerating half embryos.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Freeman, 1990
Not checked in the free run.
May combine two claims.
InterpretationreasoningAxis determination through localized maternal message appears to operate in bilaterian phyla and in Cnidaria.
“In summary, it appears that the principle of axis determination by localized distribution of maternal message is not only used in the different bilaterian phyla but also in Cnidaria.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationIn other phyla with planctotrophic larvae, a gut forms before metamorphosis, and substrate adhesion occurs at the posterior/blastopore area rather than the anterior pole as in hydrozoan larvae, usually with later body-axis reorientation.
“In all the other phyla with planctotrophic larvae, a gut develops prior to metamorphosis, substrate adhesion does not occur at the anterior pole like in hydrozoan larvae but with the posterior/blastopore area, usually followed by a reorientation of body axis (Nielsen, 1997;personal communication).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Nielsen, 1997
Not checked in the free run.
The authors state this as an assumption.
Regeneration or asexual reproduction and embryonic development could be regulated differently.
“However, there are good reasons to assume that both processes could be differently regulated when compared with embryonic development (Gardiner et al., 1995;Bayascas et al., 1998;Torok et al., 1998;Orii et al., 1999;Spring et al., 2000).”
The paper relies on this without support.
Cnidarians have shown little change in axial complexity since Precambrian times.
“They are the best-studied outgroup to the bilaterians and appear to show little change in axial complexity since the precambrian times.”
The paper relies on this without support.
The expression pattern of Cnox-1 (cnox-3) during Hydra embryogenesis is not known.
“Cnox-1 (cnox-3) expression pattern during Hydra embryogenesis is not known and, therefore, a direct comparison not possible.”
The paper relies on this without support.
Cnox-1 family members are related to labial, the Drosophila anterior Hox gene.
“Members of the Cnox-1 family are related to the Drosophila anterior Hox gene labial”
The paper relies on this without support.
The Gsx of Podocoryne corresponds to Hydra cnox-2 and Acropora millepora cnox-2Am.
“The Gsx of Podocoryne corresponds to the Hydra cnox-2 and the cnox-2Am of the anthozoan Acropora millepora.”
The paper relies on this without support.
As larvae settle and form polyps, the larval posterior pole becomes the anterior/head region of the sessile polyp.
“During larva settlement and polyp formation, the posterior pole of the larva becomes the anterior or”
The paper relies on this without support.
In all bilaterian protostomes, gastrulation site becomes the adult mouth opening.
“Additionally, as in all bilaterian protostomes, the site of gastrulation will become the mouth opening of the adult.”
The paper relies on this without support.
Formation of the inner cell layer in hydrozoans follows highly variable patterns without blastopore formation.
“However, formation of the inner cell layer in the hydrozoans follows highly variable patterns without blastopore formation.”
The paper relies on this without support.
Cnidarians in sensu stricto have no head.
“Cnidarians in sensu stricto have no head.”
The paper relies on this without support.
Polyps have no specific sense organs.
“Polyps have no specific sense organs”
The paper relies on this without support.
In medusae, statocysts and lens eyes may form at the bell margin, but nerve cells do not form brain-like structures.
“In the medusa stage, statocysts and lens eyes can differentiate at the bell margin of many medusae, but nerve cells never form brain-like structures.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Cnidarians and bilaterians share numerous genes for transcription factors, signaling components, and cell-type proteins.
“The cnidarians share with bilaterians many genes encoding transcription factors, signaling pathway components, and cell type-specific proteins (e.g., Yanze et al., 2001;Schuchert et al., 1993;Gro ¨ger et al., 1999;Mu ¨ller et al., 1999;Smith et al., 1999;Spring et al., 2000).”
From Precambrian Animal Life: Probable Developmental and Adult Cnidarian Forms from Southwest China (2002) · cites this paper as Yanze et al., 2001
Ash and Net-like are maternal messages, as was already observed for Hox/ParaHox genes, Twist, Brachyury, Mef2, and Snail.
“As was already observed for the Hox/ParaHox genes (Yanze et al., 2001), Twist (Spring et al., 2000), Brachyury, Mef2, and Snail (Spring et al., 2002) Ash and Net-like are maternal messages.”
From Evolutionary aspects of developmentally regulated helix-loop-helix transcription factors in striated muscle of jellyfish (2003) · cites this paper as Yanze et al., 2001
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Figure 6F is assigned two different embryo stages
MinorThe results identify the embryo shown in Figure 6F as being at the 8-cell stage, but the figure caption identifies it as a 16-cell-stage embryo.
“In the 8-cell stage, the message is found only in the animal pole quartet (Fig. 6F)”
“(F) 16-cell stage embryo; the message is localized in the animal quartet.”
Cites
The zootype and the phylotypic stage
Slack, J. M. W., Holland, P. W. H., & Graham, C. F. (1993) · Nature · doi:10.1038/361490a0 · Cited by 699 · see citing works
WNT signalling molecules act in axis formation in the diploblastic metazoan Hydra
Hobmayer, B., Rentzsch, F., Kuhn, K., Happel, C. M., von Laue, C. C., Snyder, P., Rothbächer, U., & Holstein, T. W. (2000) · Nature · doi:10.1038/35025063 · Cited by 599 · see citing works
A critical reappraisal of the fossil record of the bilaterian phyla
BUDD, G. E., & JENSEN, S. (2000) · Biological Reviews of the Cambridge Philosophical Society · doi:10.1017/s000632310000548x · Cited by 428 · see citing works
Fossils, molecules and embryos: new perspectives on the Cambrian explosion
Valentine, J. W., Jablonski, D., & Erwin, D. H. (1999) · Development · doi:10.1242/dev.126.5.851 · Cited by 300 · see citing works
Ancient origins of axial patterning genes: Hox genes and ParaHox genes in the Cnidaria
Finnerty, J. R., & Martindale, M. Q. (1999) · Evolution & Development · doi:10.1046/j.1525-142x.1999.99010.x · Cited by 152 · cited 2× · see citing works
“The structural relationship between the cnidarian genes and the Hox/ParaHox genes from bilaterians raises interesting questions about their function in the patterning of the body axis in basic phyla ( Finnerty and Martindale, 1999; Kuhn et al., 1999; Martinez et al., 1998; reviewed in Galliot, 2000).”
BackgroundShenk, M. A., Bode, H. R., & Steele, R. E. (1993) · Development · doi:10.1242/dev.117.2.657 · Cited by 129 · see citing works
The Mesoderm Specification Factor Twist in the Life Cycle of Jellyfish
Spring, J., Yanze, N., Middel, A. M., Stierwald, M., Gröger, H., & Schmid, V. (2000) · Developmental Biology · doi:10.1006/dbio.2000.9956 · Cited by 115 · see citing works
Self-citationGene structure and larval expression of cnox-2Am from the coral Acropora millepora
C. Hayward, D., Catmull, J., Reece-Hoyes, J. S., Berghammer, H., Dodd, H., Hann, S. J., Miller, D. J., & Ball, E. E. (2001) · Development Genes and Evolution · doi:10.1007/s004270000112 · Cited by 79 · see citing works
Müller, P., Yanze, N., Schmid, V., & Spring, J. (1999) · Developmental Biology · doi:10.1006/dbio.1999.9522 · Cited by 57 · see citing works
Self-citationThe cleavage initiation site establishes the posterior pole of the hydrozoan embryo
Freeman, G. (1981) · Wilhelm Roux's Archives of Developmental Biology · doi:10.1007/bf00848406 · Cited by 42 · see citing works
Flagged first, then by citations
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Cited by
Sorted by citations
Origins of Bilateral Symmetry: <i>Hox</i> and <i>Dpp</i> Expression in a Sea Anemone
Finnerty, J. R., Pang, K., Burton, P., Paulson, D., & Martindale, M. Q. (2004) · Science · doi:10.1126/science.1091946 · Cited by 407 · see citing works
Evolution of striated muscle: Jellyfish and the origin of triploblasty
Seipel, K., & Schmid, V. (2005) · Developmental Biology · doi:10.1016/j.ydbio.2005.03.032 · Cited by 172 · see citing works
Self-citationOrigins of neurogenesis, a cnidarian view
Galliot, B., Quiquand, M., Ghila, L., de Rosa, R., Miljkovic-Licina, M., & Chera, S. (2009) · Developmental Biology · doi:10.1016/j.ydbio.2009.05.563 · Cited by 168 · see citing works
Precambrian Animal Life: Probable Developmental and Adult Cnidarian Forms from Southwest China
Chen, J.-Y., Oliveri, P., Gao, F., Dornbos, S. Q., Li, C.-W., Bottjer, D. J., & Davidson, E. H. (2002) · Developmental Biology · doi:10.1006/dbio.2002.0714 · Cited by 165 · see citing works
Spring, J., Yanze, N., Jösch, C., Middel, A. M., Winninger, B., & Schmid, V. (2002) · Developmental Biology · doi:10.1006/dbio.2002.0616 · Cited by 152 · see citing works
Self-citationLee, P. N., Kumburegama, S., Marlow, H. Q., Martindale, M. Q., & Wikramanayake, A. H. (2007) · Developmental Biology · doi:10.1016/j.ydbio.2007.05.040 · Cited by 135 · see citing works
A simple plan-Cnidarians and the origins of developmental mechanisms
Ball, E. E., Hayward, D. C., Saint, R., & Miller, D. J. (2004) · Nature Reviews Genetics · doi:10.1038/nrg1402 · Cited by 123 · see citing works
Reverse development in Cnidaria
Piraino, S., De Vito, D., Schmich, J., Bouillon, J., & Boero, F. (2004) · Canadian Journal of Zoology · doi:10.1139/z04-174 · Cited by 87 · see citing works
Embryonic development and metamorphosis of the scyphozoan Aurelia
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Müller, P., Seipel, K., Yanze, N., Reber-Müller, S., Streitwolf-Engel, R., Stierwald, M., Spring, J. Ü., & Schmid, V. (2003) · Developmental Biology · doi:10.1016/s0012-1606(02)00091-x · Cited by 69 · see citing works
Self-citationComplex neural architecture in the diploblastic larva of Clava multicornis (Hydrozoa, Cnidaria)
Piraino, S., Zega, G., Di Benedetto, C., Leone, A., Dell'Anna, A., Pennati, R., Candia Carnevali, D., Schmid, V., & Reichert, H. (2011) · Journal of Comparative Neurology · doi:10.1002/cne.22614 · Cited by 56 · see citing works
Self-citation
- Authors
- Yanze, N., Spring, J., Schmidli, C., & Schmid, V.
- Affiliations
- University of Basel (CH)
- Corresponding author
- Schmid, Volker
- ORCID
- Schmid, Volker
- Venue
- Developmental Biology
- Publisher
- Elsevier BV
- Published
- 2001-08
- Volume
- 236
- Issue
- 1
- Pages
- 89-98
- ISSN
- 0012-1606 (ISSN-L)
- OpenAlex
- W2011655218
- Semantic Scholar
- 9b1333ee2a07c4bbb84f08b5d83e4b0d62e0fcee
- Cited by
- 99
- References
- 10
- Citations by year
- 2026: 1 · 2023: 2 · 2022: 1 · 2020: 1 · 2019: 1 · 2018: 2 · 2017: 1 · 2016: 3 · 2015: 4 · 2013: 2 · 2012: 5
- FWCI
- 3.61
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Developmental Biology (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Science Foundation
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (61443)
- National Eye Institute
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
- Physical Sciences › Earth and Planetary Sciences › Paleontology › Marine Invertebrate Physiology and Ecology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Planarian Biology and Electrostimulation
- Keywords
- Hox genes, ParaHox genes, Podocoryne carnea, axial patterning, maternal mRNA, planula, gastrulation, gene expression, phylogenetic analysis, bilaterian evolution, body plan evolution, homeobox genes
- MeSH terms
- Amino Acid Sequence, Animals, Cloning, Molecular, Cnidaria, Genes, Homeobox, Models, Biological, Molecular Sequence Data, Phylogeny, Time Factors, Conserved Sequence, Caenorhabditis elegans, Sequence Homology, Amino Acid, In Situ Hybridization, Homeodomain Proteins, Gene Expression Regulation, Developmental, Evolution, Molecular, Reverse Transcriptase Polymerase Chain Reaction
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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