Cited by 161Tryptophan and brain disordersToxic Organic Pollutants ImpactPharmacogenetics and Drug Metabolism

Trace derivatives of kynurenine potently activate the aryl hydrocarbon receptor (AHR)

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Seok, Seung-Hyeon, Ma, Zhi-Xiong, Feltenberger, John B., Chen, Hongbo, Chen, Hui, Scarlett, Cameron, Lin, Ziqing, Satyshur, Kenneth A. +6 more·2018·Journal of Biological Chemistry

Abstract

Cellular metabolites act as important signaling cues, but are subject to complex unknown chemistry. Kynurenine is a tryptophan metabolite that plays a crucial role in cancer and the immune system. Despite its atypical, non-ligand-like, highly polar structure, kynurenine activates the aryl hydrocarbon receptor (AHR), a PER, ARNT, SIM (PAS) family transcription factor that responds to diverse environmental and cellular ligands. The activity of kynurenine is increased 100-1000-fold by incubation or long-term storage and relies on the hydrophobic ligand-binding pocket of AHR, with identical structural signatures for AHR induction before and after activation. We purified trace-active derivatives of kynurenine and identified two novel, closely related condensation products, named trace-extended aromatic condensation products (TEACOPs), which are active at low picomolar levels. The synthesized compound for one of the predicted structures matched the purified compound in both chemical structure and AHR pharmacology. Our study provides evidence that kynurenine acts as an AHR pro-ligand, which requires novel chemical conversions to act as a receptor agonist.

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Crossref · 10.1074/jbc.ra117.000631

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  • Recent docking studies allowed prediction of the binding modes of several AhR ligands and led to the discovery of novel AhR agonists and SAhRMs.

    “On the basis of these novel approaches, recent docking studies not only allowed prediction of the binding modes of several AhR ligands but also led to the discovery of novel AhR agonists and SAhRMs25,27–30.”

    From Modeling the binding of diverse ligands within the Ah receptor ligand binding domain (2019) · cites this paper as [29]

    The Modeling section (page not available) describes docking several AHR ligands to predict their interactions. The Discussion (page not available) reports discovery of two potent new AHR-activating compounds, but attributes that discovery to a combination of methods rather than docking alone. Our copy does not identify the compounds as SAhRMs. (LLM, conf=0.86)

    Experimental — accuracy not yet measured
  • Such ligands may function as pro-ligands through conversion to real AHR ligands with higher binding potencies, as exemplified by kynurenine and its trace derivatives.

    “They may rather function as “pro-ligands” through further conversion to “real” AHR ligands with much higher binding potencies, as exemplified by kynurenine and its trace derivatives52.”

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Authors
Seok, S.-H., Ma, Z.-X., Feltenberger, J. B., Chen, H., Chen, H., Scarlett, C., Lin, Z., Satyshur, K. A., Cortopassi, M., Jefcoate, C. R., Ge, Y., Tang, W., Bradfield, C. A., & Xing, Y.
Affiliations
University of Wisconsin–Madison (US)
Corresponding author
Xing, Yongna
Venue
Journal of Biological Chemistry
Publisher
Elsevier BV
Published
2018-02
Volume
293
Issue
6
Pages
1994-2005
ISSN
0021-9258 (ISSN-L)
OpenAlex
W2779643604
Cited by
157
References
48
Citations by year
2026: 15 · 2025: 27 · 2024: 16 · 2023: 19 · 2022: 16 · 2021: 16 · 2020: 22 · 2019: 16 · 2018: 10
FWCI
4.37
Type
journal article
Language
en
Open access
Locations
  • Journal of Biological Chemistry (publishedVersion, cc-by)
  • Europe PMC (PubMed Central) (publishedVersion)
  • PubMed Central (publishedVersion)
  • PubMed (publishedVersion)
Funders
DH National Institute for Health Research (NIHR) (R01 GM096060, R35028377)
Topics
  • Life Sciences › Neuroscience › Biological Psychiatry › Tryptophan and brain disorders
  • Physical Sciences › Environmental Science › Health, Toxicology and Mutagenesis › Toxic Organic Pollutants Impact
  • Life Sciences › Pharmacology, Toxicology and Pharmaceutics › Pharmacology › Pharmacogenetics and Drug Metabolism
Keywords
kynurenine, aryl hydrocarbon receptor, tryptophan metabolism, AhR activation, binding pocket, condensation products, transcription factor activation
MeSH terms
Animals, Binding Sites, Kinetics, Kynurenine, Ligands, Molecular Structure, Receptors, Aryl Hydrocarbon, Mice

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