The DOI matches its Crossref record.
A Membrane Coat Complex Essential for Endosome-to-Golgi Retrograde Transport in Yeast
Abstract
We have recently characterized three yeast gene products (Vps35p, Vps29p, and Vps30p) as candidate components of the sorting machinery required for the endosome-to-Golgi retrieval of the vacuolar protein sorting receptor Vps10p (Seaman, M.N.J., E.G. Marcusson, J.-L. Cereghino, and S.D. Emr. 1997. J. Cell Biol. 137:79–92). By genetic and biochemical means we now show that Vps35p and Vps29p interact and form part of a multimeric membrane-associated complex that also contains Vps26p, Vps17p, and Vps5p. This complex, designated here as the retromer complex, assembles from two distinct subcomplexes comprising (a) Vps35p, Vps29p, and Vps26p; and (b) Vps5p and Vps17p. Density gradient fractionation of Golgi/endosomal/vesicular membranes reveals that Vps35p cofractionates with Vps5p/Vps17p in a vesicle-enriched dense membrane fraction. Furthermore, gel filtration analysis indicates that Vps35p and Vps5p are present on a population of vesicles and tubules slightly larger than COPI/coatomer-coated vesicles. We also show by immunogold EM that Vps5p is localized to discrete regions at the rims of the prevacuolar endosome where vesicles appear to be budding. Size fractionation of cytosolic and recombinant Vps5p reveals that Vps5p can self-assemble in vitro, suggesting that Vps5p may provide the mechanical impetus to drive vesicle formation. Based on these findings we propose a model in which Vps35p/Vps29p/Vps26p function to select cargo for retrieval, and Vps5p/Vps17p assemble onto the membrane to promote vesicle formation. Conservation of the yeast retromer complex components in higher eukaryotes suggests an important general role for this complex in endosome-to-Golgi retrieval.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Retriever, CCC and WASH complexes are selectively lost in some species, including all fungi, which have retained retromer.
“However, retriever, the CCC and WASH complexes are selectively lost in some species, including all fungi, which have retained retromer7.”
From Retriever is a multiprotein complex for retromer-independent endosomal cargo recycling (2017) · cites this paper as [7]
In yeast, retromer is a pentameric assembly.
“In yeast, retromer is a pentameric assembly (Seaman et al., 1998).”
From Acute inactivation of retromer and ESCPE-1 leads to time-resolved defects in endosomal cargo sorting (2020) · cites this paper as Seaman et al., 1998
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
No references could be resolved yet.
Research works printed but not linked: 61
- Babst, 1997, Endosomal transport function in yeast requires a novel AAA-type ATPase, Vps4p, EMBO (Eur Mol Biol Organ) J, 16, 1820, 10.1093/emboj/16.8.1820 · DOI
- Bachhawat, 1994, The yeast homologue of Hβ58, a mouse gene essential for embryogenesis performs a role in the delivery of proteins to the vacuole, Genes Dev, 8, 1379, 10.1101/gad.8.12.1379 · DOI
- Bankaitis, 1986, Isolation of yeast mutants defective in protein targeting to the vacuole, Proc Natl Acad Sci USA, 83, 9075, 10.1073/pnas.83.23.9075 · DOI
- Banta, 1988, Organelle assembly in yeast: characterization of yeast mutants defective in vacuolar biogenesis and protein sorting, J Cell Biol, 107, 1369, 10.1083/jcb.107.4.1369 · DOI
- Becherer, 1996, Novel syntaxin homologue, Pep12p, required for the sorting of lumenal hydrolases to the lysosome-like vacuole in yeast, Mol Biol Cell, 7, 579, 10.1091/mbc.7.4.579 · DOI
- Cereghino, 1995, The cytoplasmic tail domain of the vacuolar sorting receptor Vps10p and a subset of VPSgene products regulate receptor stability, function, and localization, Mol Biol Cell, 6, 1089, 10.1091/mbc.6.9.1089 · DOI
- Cooper, 1996, Vps10p cycles between the late-Golgi and prevacuolar compartments in its function as the sorting receptor for multiple yeast vacuolar hydrolases, J Cell Biol, 133, 529, 10.1083/jcb.133.3.529 · DOI
- Damke, 1996, Dynamin and receptor-mediated endocytosis, FEBS Lett, 389, 48, 10.1016/0014-5793(96)00517-0 · DOI
- Ekena, 1995, The Saccharomyces cerevisiae MVP1 gene interacts with VPS1and is required for vacuolar protein sorting, Mol Cell Biol, 15, 1671, 10.1128/MCB.15.3.1671 · DOI
- Elble, 1992, A simple and efficient procedure for transformation of yeasts, Biotechniques, 13, 18
- Glickman, 1989, Specificity of binding of clathrin adaptors to signals on the mannose-6-phosphate/insulin-like growth factor II receptor, EMBO (Eur Mol Biol Organ) J, 8, 1041, 10.1002/j.1460-2075.1989.tb03471.x · DOI
- Hanahan, 1983, Studies on transformation of Escherchia coliwith plasmids, J Mol Biol, 166, 557, 10.1016/S0022-2836(83)80284-8 · DOI
- Hille-Rehfeld, 1995, Mannose 6-phosphate receptors in sorting and transport of lysosomal enzymes, Biochim Biophys Acta, 1241, 177, 10.1016/0304-4157(95)00004-B · DOI · Paper page
- Horazdovsky, 1997, A sorting nexin-1 homologue, Vps5p, forms a complex with Vps17p and is required for recycling the vacuolar protein-sorting receptor, Mol Biol Cell, 8, 1529, 10.1091/mbc.8.8.1529 · DOI
- Hwang, 1996, Genetic mapping and embryonic expression of a novel, maternally transcribed gene, Mem3, Mamm Genome, 7, 586, 10.1007/s003359900174 · DOI
- Jones, 1977, Proteinase mutants of Saccharomyces cerevisiae., Genetics, 85, 23, 10.1093/genetics/85.1.23 · DOI
- Kirchhausen, 1997, Linking cargo to vesicle formation: receptor tail interactions with coat proteins, Curr Opin Cell Biol, 9, 488, 10.1016/S0955-0674(97)80024-5 · DOI
- Kohrer, 1993, The yeast VPS17gene encodes a membrane-associated protein required for the sorting of soluble vacuolar hydrolases, J Biol Chem, 268, 559, 10.1016/S0021-9258(18)54188-0 · DOI
- Kornfeld, 1992, Structure and function of the mannose 6-phosphate/insulin-like growth factor II receptors, Annu Rev Biochem, 61, 307, 10.1146/annurev.bi.61.070192.001515 · DOI
- Kornfeld, 1989, The biogenesis of lysosomes, Annu Rev Cell Biol, 5, 483, 10.1146/annurev.cb.05.110189.002411 · DOI
- Kurten, 1996, Enhanced degradation of EGF receptors by a sorting nexin, SNX1, Science, 272, 1008, 10.1126/science.272.5264.1008 · DOI · Paper page
- Le Borgne, 1997, Mannose 6-phosphate receptors regulate the formation of clathrin-coated vesicles in the TGN, J Cell Biol, 137, 335, 10.1083/jcb.137.2.335 · DOI · Paper page
- Le Borgne, 1993, Binding of AP-1 Golgi adaptors to membranes requires phosphorylated cytoplasmic domains of the mannose-6-phosphate/insulin-like growth factor II receptor, J Biol Chem, 268, 22552, 10.1016/S0021-9258(18)41565-7 · DOI
- Lee, 1992, Identification and characterization of a novel, evolutionary conserved gene disrupted by the murine Hβ58 embryonic lethal transgene insertion, Development, 115, 277, 10.1242/dev.115.1.277 · DOI
- Marcusson, 1994, The sorting receptor for yeast vacuolar carboxypeptidase Y is encoded by the VPS10gene, Cell, 77, 579, 10.1016/0092-8674(94)90219-4 · DOI · Paper page
- McCaffery, 1995, Localization of GTPases by indirect immunofluorescence and immunoelectron microscopy, Methods Enzymol, 257, 259, 10.1016/S0076-6879(95)57031-4 · DOI
- Mitchell, 1993, Vectors for the inducible overexpression of glutathione S-transferase fusion proteins in yeast, Yeast, 9, 715, 10.1002/yea.320090705 · DOI
- Nothwehr, 1996, The newly identified yeast GRDgenes are required for retention of late-Golgi membrane proteins, Mol Cell Biol, 16, 2700, 10.1128/MCB.16.6.2700 · DOI
- Nothwehr, 1995, Golgi and vacuolar membrane proteins reach the vacuole in vps1mutant yeast cells via the plasma membrane, J Cell Biol, 129, 35, 10.1083/jcb.129.1.35 · DOI
- Nothwehr, 1997, The yeast VPS5/GRD2gene encodes a sorting nexin-1-like protein required for localizing membrane proteins to the late-Golgi, J Cell Sci, 110, 1063, 10.1242/jcs.110.9.1063 · DOI
- Ohno, 1995, Interaction of tyrosine-based sorting signals with clathrin-associated proteins, Science, 269, 1872, 10.1126/science.7569928 · DOI
- Ostermann, 1993, Stepwise assembly of functionally active transport vesicles, Cell, 75, 1015, 10.1016/0092-8674(93)90545-2 · DOI
- Paravicini, 1992, Alternative pathways for the sorting of soluble vacuolar proteins in yeast: a vps35null mutant missorts and secretes only a subset of vacuolar hydrolases, Mol Biol Cell, 3, 415, 10.1091/mbc.3.4.415 · DOI
- Payne, 1989, Clathrin: a role in the intracellular retention of a Golgi membrane protein, Science, 245, 1358, 10.1126/science.2675311 · DOI
- Pearse, 1990, Clathrin, adaptors, and sorting, Annu Rev Cell Biol, 6, 151, 10.1146/annurev.cb.06.110190.001055 · DOI
- Ponting, 1996, Novel domains in NADPH oxidase subunits, sorting nexins, and PtdIns 3-kinases: binding partners of SH3 domains?, Protein Sci, 5, 2353, 10.1002/pro.5560051122 · DOI · Paper page
- Raymond, 1992, Morphological classification of the yeast vacuolar protein sorting mutants: evidence for a prevacuolar compartment in class E vpsmutants, Mol Biol Cell, 3, 1389, 10.1091/mbc.3.12.1389 · DOI
- Redding, 1996, The effects of clathrin inactivation on localization of Kex2 protease are independent of the TGN localization signal in the cytosolic tail of Kex2p, Mol Biol Cell, 7, 1667, 10.1091/mbc.7.11.1667 · DOI
- Rieder, 1996, Multilamellar endosome-like compartment accumulates in the yeast vps28vacuolar protein sorting mutant, Mol Biol Cell, 7, 985, 10.1091/mbc.7.6.985 · DOI
- Riederer, 1994, Lysosome biogenesis requires Rab9 function and receptor recycling from endosomes to the trans-Golgi network, J Cell Biol, 1994, 573, 10.1083/jcb.125.3.573 · DOI
- Robinson, 1988, Protein sorting in Saccharomyces cerevisiae: isolation of mutants defective in the delivery and processing of multiple vacuolar hydrolases, Mol Cell Biol, 8, 4936
- Rothman, 1992, Molecular dissection of the secretory pathway, Nature, 355, 409, 10.1038/355409a0 · DOI
- Rothman, 1996, Protein sorting by transport vesicles, Science, 272, 227, 10.1126/science.272.5259.227 · DOI
- Rothman, 1990, A putative GTP binding protein homologous to interferon-inducible Mx proteins performs an essential function in yeast protein sorting, Cell, 61, 1063, 10.1016/0092-8674(90)90070-U · DOI
- Rothman, 1986, Protein sorting in yeast: mutants defective in vacuole biogenesis mislocalize vacuolar proteins into the late secretory pathway, Cell, 47, 1041, 10.1016/0092-8674(86)90819-6 · DOI
- Schekman, 1996, Coat proteins and vesicle budding, Science, 271, 1526, 10.1126/science.271.5255.1526 · DOI
- Schweizer, 1997, Proper sorting of the cation- dependent mannose 6-phosphate receptor in endosomes depends on a pair of aromatic amino acids in its cytoplasmic tail, Proc Natl Acad Sci USA, 94, 14471, 10.1073/pnas.94.26.14471 · DOI
- Seaman, 1997, Endosome-to-Golgi retrieval of the vacuolar protein sorting receptor, Vps10p, requires the function of VPS29, VPS30 and VPS35gene products, J Cell Biol, 137, 79, 10.1083/jcb.137.1.79 · DOI · Paper page
- Seeger, 1992, A role for clathrin in the sorting of vacuolar proteins in the Golgi complex of yeast, EMBO (Eur Mol Biol Organ) J, 11, 2811, 10.1002/j.1460-2075.1992.tb05348.x · DOI · Paper page
- Seeger, 1992, Selective and immediate effects of clathrin heavy chain Mutations on Golgi membrane protein retention in Saccharomyces cerevisiae., J Cell Biol, 118, 531, 10.1083/jcb.118.3.531 · DOI
- Serafini, 1991, A coat subunit of Golgi-derived non clathrin-coated vesicles with homology to the clathrin-coated vesicle protein β-adaptin, Nature, 349, 248, 10.1038/349215a0 · DOI
- Smith, 1988, Single-step purification of polypeptides expressed in Escherichia colias fusions with glutathione S-transferase, Gene, 67, 31, 10.1016/0378-1119(88)90005-4 · DOI
- Takei, 1996, The synaptic vesicle cycle: a single vesicle budding step involving clathrin and dynamin, J Cell Biol, 133, 1237, 10.1083/jcb.133.6.1237 · DOI
- Traub, 1997, The trans-Golgi network: a late secretory sorting station, Curr Opin Cell Biol, 9, 527, 10.1016/S0955-0674(97)80029-4 · DOI
- Vater, 1992, The VPS1protein, a homologue of dynamin required for vacuolar protein sorting in Saccharomyces cerevisiae, is a GTPase with two functionally separable domains, J Cell Biol, 119, 773, 10.1083/jcb.119.4.773 · DOI
- Voos, 1998, Retrieval of resident late-Golgi membrane proteins from the prevacuolar compartment of Sacchormyces cerevisiaeis dependent upon the function of Grd19p, J Cell Biol, 140, 577, 10.1083/jcb.140.3.577 · DOI
- Warnock, 1996, Dynamin GTPase, a force-generating molecular switch, Bioessays, 18, 885, 10.1002/bies.950181107 · DOI
- Westphal, 1996, Multiple pathways for vacuolar sorting of yeast proteinase A, J Biol Chem, 271, 11865, 10.1074/jbc.271.20.11865 · DOI
- Wilcox, 1992, Mutation of a tyrosine localization signal in the cytosolic tail of yeast Kex2 protease disrupts Golgi retention and results in default transport to the vacuole, Mol Biol Cell, 3, 1353, 10.1091/mbc.3.12.1353 · DOI
- Wilsbach, 1993, Vps1p, a member of the dynamin GTPase family, is necessary for Golgi membrane protein retention in Saccharomyces cerevisiae., EMBO (Eur Mol Biol Organ) J, 12, 3049, 10.1002/j.1460-2075.1993.tb05974.x · DOI
- Wilsbach, 1993, Dynamic retention of TGN membrane proteins in Saccharomyces cerevisiae., Trends Cell Biol, 3, 426, 10.1016/0962-8924(93)90031-U · DOI
Cited by
Sorted by citations
A new pathway for mitochondrial quality control: Mitochondrial-derived vesicles
Sugiura, A., McLelland, G., Fon, E. A., & McBride, H. M. (2014) · The EMBO Journal · doi:10.15252/embj.201488104 · Cited by 862
To degrade or not to degrade: Mechanisms and significance of endocytic recycling
Cullen, P. J., & Steinberg, F. (2018) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-018-0053-7 · Cited by 590
Cargo-selective endosomal sorting for retrieval to the Golgi requires retromer
Seaman, M. N. J. (2004) · The Journal of Cell Biology · doi:10.1083/jcb.200312034 · Cited by 624
Self-citationGenetics in Parkinson disease: Mendelian versus non‐Mendelian inheritance
Hernandez, D. G., Reed, X., & Singleton, A. B. (2016) · Journal of Neurochemistry · doi:10.1111/jnc.13593 · Cited by 448
Model‐guided microarray implicates the retromer complex in Alzheimer's disease
Small, S. A., Kent, K., Pierce, A., Leung, C., Kang, M. S., Okada, H., Honig, L., Vonsattel, J., & Kim, T. (2005) · Annals of Neurology · doi:10.1002/ana.20667 · Cited by 440
Retromer: A Master Conductor of Endosome Sorting
Burd, C., & Cullen, P. J. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a016774 · Cited by 435
Retriever is a multiprotein complex for retromer-independent endosomal cargo recycling
McNally, K. E., Faulkner, R., Steinberg, F., Gallon, M., Ghai, R., Pim, D., Langton, P., Pearson, N., Danson, C. M., Nägele, H., et al. (2017) · Nature Cell Biology · doi:10.1038/ncb3610 · Cited by 346
Endosomal retrieval of cargo: Retromer is not alone
McNally, K. E., & Cullen, P. J. (2018) · Trends in Cell Biology · doi:10.1016/j.tcb.2018.06.005 · Cited by 169
Lysosome biogenesis in health and disease
Bajaj, L., Lotfi, P., Pal, R., Ronza, A. D., Sharma, J., & Sardiello, M. (2019) · Journal of Neurochemistry · doi:10.1111/jnc.14564 · Cited by 153
The Retromer Complex: From Genesis to Revelations
Seaman, M. N. J. (2021) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2020.12.009 · Cited by 104
Self-citationRetromer stabilization results in neuroprotection in a model of Amyotrophic Lateral Sclerosis
Muzio, L., Sirtori, R., Gornati, D., Eleuteri, S., Fossaghi, A., Brancaccio, D., Manzoni, L., Ottoboni, L., Feo, L. D., Quattrini, A., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-17524-7 · Cited by 65
Structural organization of the retriever–CCC endosomal recycling complex
Boesch, D. J., Singla, A., Han, Y., Kramer, D. A., Liu, Q., Suzuki, K., Juneja, P., Zhao, X., Long, X., Medlyn, M. J., et al. (2024) · Nature Structural & Molecular Biology · doi:10.1038/s41594-023-01184-4 · Cited by 52
Receptor Recycling by Retromer
Carosi, J. M., Denton, D., Kumar, S., & Sargeant, T. J. (2023) · Molecular and Cellular Biology · doi:10.1080/10985549.2023.2222053 · Cited by 36
Dhawan, K., Naslavsky, N., & Caplan, S. (2020) · Journal of Biological Chemistry · doi:10.1074/jbc.ra119.011368 · Cited by 36
Acute inactivation of retromer and ESCPE-1 leads to time-resolved defects in endosomal cargo sorting
Evans, A. J., Daly, J. L., Anuar, A. N. K., Simonetti, B., & Cullen, P. J. (2020) · Journal of Cell Science · doi:10.1242/jcs.246033 · Cited by 25
Structural basis for Retriever-SNX17 assembly and endosomal sorting
Singla, A., Boesch, D. J., Fung, H. Y. J., Ngoka, C., Enriquez, A. S., Song, R., Kramer, D. A., Han, Y., Banarer, E., Lemoff, A., et al. (2024) · Nature Communications · doi:10.1038/s41467-024-54583-6 · Cited by 23
Mapping of endosomal proximity proteomes reveals Retromer as a hub for RAB GTPase regulation
Antón-Plágaro, C., Chen, K.-E., Guo, Q., Liu, M., Evans, A. J., Lewis, P. A., Heesom, K. J., Wilkinson, K. A., Collins, B. M., & Cullen, P. J. (2025) · Nature Communications · doi:10.1038/s41467-025-61802-1 · Cited by 14
Metadata
- Authors
- Seaman, M. N. J., Michael McCaffery, J., & Emr, S. D.
- Venue
- The Journal of Cell Biology
- Publisher
- Rockefeller University Press
- Published
- 1998-08-10
- Volume
- 142
- Issue
- 3
- Pages
- 665-681
- ISSN
- 0021-9525
- 1540-8140
- PMC
- PMC2148169
- Cited by
- 698
- References
- 0
- Language
- en
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review