Cited by 449

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

Interactions between heparan sulfate and proteins: the concept of specificity

Kreuger, Johan, Spillmann, Dorothe, Li, Jin-ping, Lindahl, Ulf·2006·The Journal of Cell Biology

Abstract

Proteoglycan (PG) coreceptors carry heparan sulfate (HS) chains that mediate interactions with growth factors, morphogens, and receptors. Thus, PGs modulate fundamental processes such as cell survival, division, adhesion, migration, and differentiation. This review summarizes recent biochemical and genetic information that sheds new light on the nature of HS–protein binding. Unexpectedly, many interactions appear to depend more on the overall organization of HS domains than on their fine structure.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1083/jcb.200604035

Cites

1 of 1 references verified0 citation errors · 0 not checkable

Statistics

Figures

Figure 1. Proposed roles of HSPGs in growth factor/morphogen signaling. Locally produced and secreted protein ligands (e.g., growth factors) (1) are captured by HS chains and accumulate at the cell surface (2). Interactions with HS support the generation of protein gradients (3). HS chains promote stable interactions between growth factors and receptors and, thus, modulate the quality of receptor signaling (such as amplitude and kinetics of activation/inactivation; 4). HSPGs may also regulate the turnover of receptors and participate in the internalization of receptor complexes (5). Shedding of HSPG ectodomains (Kreuger et al., 2004) or degradation of HS chains by heparanase (Vlodavsky and Friedmann, 2001) may release HS-bound ligands from the cell surface (6).
Figure 1. Proposed roles of HSPGs in growth factor/morphogen signaling. Locally produced and secreted protein ligands (e.g., growth factors) (1) are captured by HS chains and accumulate at the cell surface (2). Interactions with HS support the generation of protein gradients (3). HS chains promote stable interactions between growth factors and receptors and, thus, modulate the quality of receptor signaling (such as amplitude and kinetics of activation/inactivation; 4). HSPGs may also regulate the turnover of receptors and participate in the internalization of receptor complexes (5). Shedding of HSPG ectodomains (Kreuger et al., 2004) or degradation of HS chains by heparanase (Vlodavsky and Friedmann, 2001) may release HS-bound ligands from the cell surface (6).CC BY-NC-SA · PubMed Central
Figure 2. Biosynthesis of HS and molecular phenotypes resulting from deficient HS biosynthetic enzymes. See Esko and Lindahl (2001) and Hacker et al. (2005). HS chains are synthesized while attached to core protein serine residues through a GlcA-Gal-Gal-Xyl linkage region. The linear HS chain is thereafter polymerized through the action of GlcNAc- and GlcA-transferases belonging to the EXT family and further modified by partial N-deacetylation/N-sulfation (N-deacetylase/N-sulfotransferase) to yield NS disaccharide units. Consecutive stretches of such units (NS domains) are hotspots for further modifications: a C5 epimerase converts GlcA to IdoA followed by variable O-sulfation at C-3 and C-6 (red circles) of GlcN and at C-2 (yellow circles) of IdoA (and some GlcA) units. Completed chains may be further edited by endo-6-O-sulfatases (Ai et al., 2003). Protein ligands interact with single NS domains (e.g., FGFs) or with NS domains separated by N-acetylated disaccharide residues (SAS domains; illustrated here for VEGF-A165 [Robinson et al., 2006]; and FGF–HS–FGF receptor complexes). The bottom model depicts a molecular phenotype of C5 epimerase−/− HS that lacks IdoA and IdoA 2-O-sulfation but is more extensively N- and 6-O-sulfated than the corresponding wild-type product. The 2-O-sulfotransferase−/− HS is similar to the C5 epimerase−/− polysaccharide except for the presence of IdoA (Merry et al., 2001). HS from C5 epimerase−/− or 2-O-sulfotransferase−/− cells may still interact more or less efficiently with many protein ligands (see Knockout clues from embryology). Blue boxes, NS domains containing GlcA and/or IdoA; yellow boxes, NS domains containing GlcA but no IdoA.
Figure 2. Biosynthesis of HS and molecular phenotypes resulting from deficient HS biosynthetic enzymes. See Esko and Lindahl (2001) and Hacker et al. (2005). HS chains are synthesized while attached to core protein serine residues through a GlcA-Gal-Gal-Xyl linkage region. The linear HS chain is thereafter polymerized through the action of GlcNAc- and GlcA-transferases belonging to the EXT family and further modified by partial N-deacetylation/N-sulfation (N-deacetylase/N-sulfotransferase) to yield NS disaccharide units. Consecutive stretches of such units (NS domains) are hotspots for further modifications: a C5 epimerase converts GlcA to IdoA followed by variable O-sulfation at C-3 and C-6 (red circles) of GlcN and at C-2 (yellow circles) of IdoA (and some GlcA) units. Completed chains may be further edited by endo-6-O-sulfatases (Ai et al., 2003). Protein ligands interact with single NS domains (e.g., FGFs) or with NS domains separated by N-acetylated disaccharide residues (SAS domains; illustrated here for VEGF-A165 [Robinson et al., 2006]; and FGF–HS–FGF receptor complexes). The bottom model depicts a molecular phenotype of C5 epimerase−/− HS that lacks IdoA and IdoA 2-O-sulfation but is more extensively N- and 6-O-sulfated than the corresponding wild-type product. The 2-O-sulfotransferase−/− HS is similar to the C5 epimerase−/− polysaccharide except for the presence of IdoA (Merry et al., 2001). HS from C5 epimerase−/− or 2-O-sulfotransferase−/− cells may still interact more or less efficiently with many protein ligands (see Knockout clues from embryology). Blue boxes, NS domains containing GlcA and/or IdoA; yellow boxes, NS domains containing GlcA but no IdoA.CC BY-NC-SA · PubMed Central

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Show all 1 references

Research works printed but not linked: 38

  1. 2003, J. Cell Biol., 162, 341, 10.1083/jcb.200212083 · DOI
  2. 2003, J. Cell Biol., 163, 637, 10.1083/jcb.200307053 · DOI
  3. 2004, J. Biol. Chem., 279, 12346, 10.1074/jbc.M313523200 · DOI
  4. 2005, J. Biol. Chem., 280, 31508, 10.1074/jbc.M414581200 · DOI
  5. 1992, Annu. Rev. Cell Biol., 8, 365, 10.1146/annurev.cb.08.110192.002053 · DOI
  6. 1999, Annu. Rev. Biochem., 68, 729, 10.1146/annurev.biochem.68.1.729 · DOI
  7. 1998, Genes Dev., 12, 1894, 10.1101/gad.12.12.1894 · DOI
  8. 1996, Nature., 380, 435, 10.1038/380435a0 · DOI
  9. 2003, Biochem. Soc. Trans., 31, 352, 10.1042/bst0310352 · DOI
  10. 2001, J. Clin. Invest., 108, 169, 10.1172/JCI200113530 · DOI
  11. 2001, J. Clin. Invest., 108, 357, 10.1172/JCI13713 · DOI
  12. 1999, Curr. Biol., 9, 1343, 10.1016/S0960-9822(00)80060-3 · DOI
  13. 2005, Nat. Rev. Mol. Cell Biol., 6, 530, 10.1038/nrm1681 · DOI
  14. 2006, Dev. Cell., 10, 625, 10.1016/j.devcel.2006.03.009 · DOI
  15. 2006, 10.1074/jbc.M600806200 · DOI
  16. 2002, J. Biol. Chem., 277, 30567, 10.1074/jbc.M203404200 · DOI
  17. 2002, EMBO J., 21, 6303, 10.1093/emboj/cdf638 · DOI
  18. 2004, Dev. Cell., 7, 503, 10.1016/j.devcel.2004.08.005 · DOI
  19. 2005, Biochem. J., 389, 145, 10.1042/BJ20042129 · DOI
  20. 2004, J. Biol. Chem., 279, 42732, 10.1074/jbc.M405382200 · DOI · Paper page
  21. 2003, J. Biol. Chem., 278, 28363, 10.1074/jbc.C300219200 · DOI
  22. 2000, Dev. Biol., 224, 299, 10.1006/dbio.2000.9798 · DOI · Paper page
  23. 1980, Proc. Natl. Acad. Sci. USA., 77, 6551, 10.1073/pnas.77.11.6551 · DOI · Paper page
  24. 1995, Biochem. J., 310, 497, 10.1042/bj3100497 · DOI
  25. 1996, J. Biol. Chem., 271, 17804, 10.1074/jbc.271.30.17804 · DOI
  26. 2001, J. Biol. Chem., 276, 35429, 10.1074/jbc.M100379200 · DOI
  27. 2004, J. Biol. Chem., 279, 27239, 10.1074/jbc.M401774200 · DOI
  28. 2004, Glycobiology., 14, 17R, 10.1093/glycob/cwh051 · DOI
  29. 1998, J. Biol. Chem., 273, 22936, 10.1074/jbc.273.36.22936 · DOI
  30. 2000, J. Biol. Chem., 275, 25926, 10.1074/jbc.C000359200 · DOI · Paper page
  31. 2006, J. Biol. Chem., 281, 1731, 10.1074/jbc.M510760200 · DOI
  32. 1996, FASEB J., 10, 1270, 10.1096/fasebj.10.11.8836040 · DOI
  33. 2000, Mol. Cell., 6, 743, 10.1016/S1097-2765(00)00073-3 · DOI · Paper page
  34. 1999, Cell., 99, 13, 10.1016/S0092-8674(00)80058-6 · DOI
  35. 1998, J. Biol. Chem., 273, 15487, 10.1074/jbc.273.25.15487 · DOI
  36. 1997, J. Biol. Chem., 272, 20508, 10.1074/jbc.272.33.20508 · DOI
  37. 1998, J. Biol. Chem., 273, 12960, 10.1074/jbc.273.21.12960 · DOI
  38. 2001, J. Clin. Invest., 108, 341, 10.1172/JCI13662 · DOI

Cited by

Sorted by citations

Metadata

Authors
Kreuger, J., Spillmann, D., Li, J.-P., & Lindahl, U.
Affiliations
  • 1Rudbeck Laboratory, Department of Genetics and Pathology,
  • 2Department of Medical Biochemistry and Microbiology, Biomedical Center, Uppsala University, SE-75185 Uppsala, Sweden
Venue
The Journal of Cell Biology
Published
2006-07-31
Volume
174
Issue
3
Pages
323-327
ISSN
  • 1540-8140
  • 0021-9525
Cited by
449
References
1
Language
en

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review