Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactions

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

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In silico prediction of protein-protein interactions in human macrophages

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Significance analysis of microarrays applied to the ionizing radiation response

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Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips

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Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

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A generic protein purification method for protein complex characterization and proteome exploration

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Proteome survey reveals modularity of the yeast cell machinery

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Genesis: cluster analysis of microarray data

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Evaluation of Multidimensional Chromatography Coupled with Tandem Mass Spectrometry (LC/LC−MS/MS) for Large-Scale Protein Analysis: The Yeast Proteome

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Parts per Million Mass Accuracy on an Orbitrap Mass Spectrometer via Lock Mass Injection into a C-trap

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Defining the Human Deubiquitinating Enzyme Interaction Landscape

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A new logic for DNA engineering using recombination in Escherichia coli

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Functional and quantitative proteomics using SILAC

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TREX is a conserved complex coupling transcription with messenger RNA export

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The KEN box: an APC recognition signal distinct from the D box targeted by Cdh1Preprint

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Analysis of protein complexes using mass spectrometry

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A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling

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BAC TransgeneOmics: a high-throughput method for exploration of protein function in mammals

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Pericentrin, a highly conserved centrosome protein involved in microtubule organization

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Systematic Analysis of Human Protein Complexes Identifies Chromosome Segregation Proteins

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Recruitment of the human TREX complex to mRNA during splicingPreprint

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Aurora-A: the maker and breaker of spindle poles

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Antitumor activity of MLN8054, an orally active small-molecule inhibitor of Aurora A kinase

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A Conserved mRNA Export Machinery Coupled to pre-mRNA Splicing

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Mutations in the Pericentrin ( PCNT ) Gene Cause Primordial Dwarfism

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The study of macromolecular complexes by quantitative proteomics

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The PACT domain, a conserved centrosomal targeting motif in the coiled‐coil proteins AKAP450 and pericentrin

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Drosophila Aurora A kinase is required to localize D-TACC to centrosomes and to regulate astral microtubules

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Mutations in pericentrin cause Seckel syndrome with defective ATR-dependent DNA damage signaling

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CDK5RAP2 Is a Pericentriolar Protein That Functions in Centrosomal Attachment of the γ-Tubulin Ring Complex

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The ch-TOG/XMAP215 protein is essential for spindle pole organization in human somatic cellsPreprint

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The TACC domain identifies a family of centrosomal proteins that can interact with microtubules

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Msps/XMAP215 interacts with the centrosomal protein D-TACC to regulate microtubule behaviour

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Techniques: Recombinogenic engineering–new options for cloning and manipulating DNA

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An integrated workflow for charting the human interaction proteome: insights into the PP2A system

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Clathrin is required for the function of the mitotic spindle

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Aurora A phosphorylation of TACC3/maskin is required for centrosome-dependent microtubule assembly in mitosis

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A Combined Approach for the Localization and Tandem Affinity Purification of Protein Complexes from Metazoans

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Mass spectrometry–based functional proteomics: from molecular machines to protein networks

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The Class II Phosphoinositide 3-Kinase C2α Is Activated by Clathrin and Regulates Clathrin-Mediated Membrane Trafficking

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Plk1-Dependent Recruitment of γ-Tubulin Complexes to Mitotic Centrosomes Involves Multiple PCM Components

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Cep68 and Cep215 (Cdk5rap2) are required for centrosome cohesion

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TREX, SR proteins and export of mRNA

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Building a spindle of the correct length in human cells requires the interaction between TPX2 and Aurora A

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Emi1 stably binds and inhibits the anaphase-promoting complex/cyclosome as a pseudosubstrate inhibitorPreprint

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A recombineering pipeline for functional genomics applied to Caenorhabditis elegans

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Aurora A activates D-TACC–Msps complexes exclusively at centrosomes to stabilize centrosomal microtubules

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High confidence determination of specific protein–protein interactions using quantitative mass spectrometry

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The TACC proteins: TACC-ling microtubule dynamics and centrosome function

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Msps protein is localized to acentrosomal poles to ensure bipolarity of Drosophila meiotic spindles

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Adaptor Aly and co‐adaptor Thoc5 function in the Tap‐p15‐mediated nuclear export of HSP70 mRNA

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TAC-1 and ZYG-9 Form a Complex that Promotes Microtubule Assembly in C. elegans Embryos

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Localization of Human TACC3 to Mitotic Spindles Is Mediated by Phosphorylation on Ser558 by Aurora A: A Novel Pharmacodynamic Method for Measuring Aurora A Activity

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Caenorhabditis elegans TAC-1 and ZYG-9 Form a Complex that Is Essential for Long Astral and Spindle Microtubules

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A novel p53‐inducible gene coding for a microtubule‐localized protein with G2‐phase‐specific expression

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Nudel Contributes to Microtubule Anchoring at the Mother Centriole and Is Involved in Both Dynein-dependent and -independent Centrosomal Protein Assembly

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RNA interference rescue by bacterial artificial chromosome transgenesis in mammalian tissue culture cells

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Kendrin/pericentrin-B, a centrosome protein with homology to pericentrin that complexes with PCM-1

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A Human Nuclear-Localized Chaperone that Regulates Dimerization, DNA Binding, and Transcriptional Activity of bZIP Proteins

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Growth-regulated expression and G0-specific turnover of the mRNA that encodes URH49, a mammalian DExH/D box protein that is highly related to the mRNA export protein UAP56

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Toward a High-Resolution View of Nuclear Dynamics

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hGTSE-1 Expression Stimulates Cytoplasmic Localization of p53

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Clathrin in mitotic spindles

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The centrosomal proteins pericentrin and kendrin are encoded by alternatively spliced products of one gene

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APC16 is a conserved subunit of the anaphase-promoting complex/cyclosome

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Mitotic and Stress-induced Phosphorylation of HsPI3K-C2α Targets the Protein for Degradation

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Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ

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The CRAPome: a contaminant repository for affinity purification–mass spectrometry data

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L-Arginine Modulates T Cell Metabolism and Enhances Survival and Anti-tumor Activity

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SAINT: probabilistic scoring of affinity purification–mass spectrometry data

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Quantitative interaction proteomics and genome-wide profiling of epigenetic histone marks and their readers

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Quantitative, High-Resolution Proteomics for Data-Driven Systems Biology

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OpenCell: Endogenous tagging for the cartography of human cellular organization

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Affinity-purification coupled to mass spectrometry: basic principles and strategies

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Quantifying protein interaction dynamics by SWATH mass spectrometry: application to the 14-3-3 system

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Review, evaluation, and discussion of the challenges of missing value imputation for mass spectrometry-based label-free global proteomics

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Stoichiometry of chromatin-associated protein complexes revealed by label-free quantitative mass spectrometry-based proteomics

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A map of general and specialized chromatin readers in mouse tissues generated by label-free interaction proteomics

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Comprehensive RNA Polymerase II Interactomes Reveal Distinct and Varied Roles for Each Phospho-CTD Residue

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Molecular fingerprinting of the podocyte reveals novel gene and protein regulatory networks

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Nuclear and cytoplasmic huntingtin inclusions exhibit distinct biochemical composition, interactome and ultrastructural properties

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A genomic toolkit to investigate kinesin and myosin motor function in cells

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Annotation of loci from genome-wide association studies using tissue-specific quantitative interaction proteomics

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SAINT-MS1: protein-protein interaction scoring using label-free intensity data in affinity purification-mass spectrometry experiments

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Noncompetitive binding of PpiD and YidC to the SecYEG translocon expands the global view on the SecYEG interactome in Escherichia coli

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Lysozyme-Induced Transcriptional Regulation of TNF-α Pathway Genes in Cells of the Monocyte Lineage

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EspL is essential for virulence and stabilizes EspE, EspF and EspH levels in Mycobacterium tuberculosis

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Beyond hairballs: The use of quantitative mass spectrometry data to understand protein–protein interactions

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Murine leukemia virus p12 tethers the capsid-containing pre-integration complex to chromatin by binding directly to host nucleosomes in mitosis

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