Identification of cell cycle-regulated genes periodically expressed in U2OS cells and their regulation by FOXM1 and E2F transcription factors

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Huang, D. W., Sherman, B. T., & Lempicki, R. A. (2009) · Nature Protocols · doi:10.1038/nprot.2008.211 · Cited by 35,890

Model-based Analysis of ChIP-Seq (MACS)

Zhang, Y., Liu, T., Meyer, C. A., Eeckhoute, J., Johnson, D. S., Bernstein, B. E., Nusbaum, C., Myers, R. M., Brown, M., Li, W., et al. (2008) · Genome Biology · doi:10.1186/gb-2008-9-9-r137 · Cited by 18,386

Cluster analysis and display of genome-wide expression patterns

Eisen, M. B., Spellman, P. T., Brown, P. O., & Botstein, D. (1998) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.95.25.14863 · Cited by 16,184

Primer3 on the WWW for General Users and for Biologist Programmers

Rozen, S., & Skaletsky, H. (2003) · Humana Press eBooks · doi:10.1385/1-59259-192-2:365 · Cited by 15,068

DAVID: Database for Annotation, Visualization, and Integrated Discovery

Dennis, G., Sherman, B. T., Hosack, D. A., Yang, J., Gao, W., Lane, H. C., & Lempicki, R. A. (2003) · Genome Biology · doi:10.1186/gb-2003-4-5-p3 · Cited by 9,327

Comprehensive Identification of Cell Cycle–regulated Genes of the YeastSaccharomyces cerevisiaeby Microarray Hybridization

Spellman, P. T., Sherlock, G. J., Zhang, M. Q., Iyer, V. R., Anders, K. R., Eisen, M. B., Brown, P. O., Botstein, D., & Futcher, B. (1998) · Molecular Biology of the Cell · doi:10.1091/mbc.9.12.3273 · Cited by 4,724

Missing Value Estimation Methods for DNA Microarrays

Troyanskaya, O., Cantor, M., Sherlock, G., Brown, P., Hastie, T., Tibshirani, R., Botstein, D., & Altman, R. B. (2001) · Bioinformatics · doi:10.1093/bioinformatics/17.6.520 · Cited by 4,230

A Genome-Wide Transcriptional Analysis of the Mitotic Cell Cycle

Cho, R. J., Campbell, M. J., Winzeler, E. A., Steinmetz, L. M., Conway, A. R., Wodicka, L. M., Wolfsberg, T. G., Gabrielian, A. E., Landsman, D., Lockhart, D. J., et al. (1998) · Molecular Cell · doi:10.1016/s1097-2765(00)80114-8 · Cited by 2,024

New Perspectives in Different Gene Expression Profiles for Early and Locally Advanced Non-Small Cell Lung Cancer Stem Cells

Masciale, V., Banchelli, F., Grisendi, G., D’Amico, R., Maiorana, A., Stefani, A., Morandi, U., Dominici, M., & Aramini, B. (2021) · Frontiers in Oncology · doi:10.3389/fonc.2021.613198 · Cited by 15

Knockdown of CKAP2 Inhibits Proliferation, Migration, and Aggregate Formation in Aggressive Breast Cancer

dos Santos, A., Ouellette, G., Diorio, C., Elowe, S., & Durocher, F. (2022) · Cancers · doi:10.3390/cancers14153759 · Cited by 15

Accelerated parallel algorithm for gene network reverse engineering

He, J., Zhou, Z., Reed, M., & Califano, A. (2017) · BMC Systems Biology · doi:10.1186/s12918-017-0458-5 · Cited by 15

Mapping metabolic oscillations during cell cycle progression

Roçi, I., Watrous, J. D., Lagerborg, K. A., Jain, M., & Nilsson, R. (2020) · Cell Cycle · doi:10.1080/15384101.2020.1825203 · Cited by 16

Hcm1 integrates signals from Cdk1 and calcineurin to control cell proliferation

Arsenault, H. E., Roy, J., Mapa, C., Cyert, M., & Benanti, J. A. (2015) · Molecular Biology of the Cell · doi:10.1091/mbc.e15-07-0469 · Cited by 16

Functional interrelationship between TFII‐I and E2F transcription factors at specific cell cycle gene loci

Shen, Y., Nar, R., Fan, A. X., Aryan, M., Hossain, M. A., Gurumurthy, A., Wassel, P. C., Tang, M., Lu, J., Strouboulis, J., et al. (2017) · Journal of Cellular Biochemistry · doi:10.1002/jcb.26235 · Cited by 14

Dysregulation of deubiquitination in breast cancer

Kong, L., & Jin, X. (2024) · Gene · doi:10.1016/j.gene.2024.148175 · Cited by 15

Co-inhibition of ATM and ROCK synergistically improves cell proliferation in replicative senescence by activating FOXM1 and E2F1

Yang, E. J., Park, J. H., Cho, H.-J., Hwang, J.-A., Woo, S., Park, C. H., Kim, S. Y., Park, J. T., Park, S. C., Hwang, D., et al. (2022) · Communications Biology · doi:10.1038/s42003-022-03658-5 · Cited by 12

The forkhead box M1 (FOXM1) expression and antitumor effect of FOXM1 inhibition in malignant rhabdoid tumor

Shibui, Y., Kohashi, K., Tamaki, A., Kinoshita, I., Yamada, Y., Yamamoto, H., Taguchi, T., & Oda, Y. (2020) · Journal of Cancer Research and Clinical Oncology · doi:10.1007/s00432-020-03438-w · Cited by 14

CK1-mediated phosphorylation of FAM110A promotes its interaction with mitotic spindle and controls chromosomal alignment

Aquino-Perez, C., Burócziová, M., Jeníková, G., & Macůrek, L. (2021) · EMBO Reports · doi:10.15252/embr.202051847 · Cited by 15

Dihydrotanshinone I Enhances Cell Adhesion and Inhibits Cell Migration in Osteosarcoma U−2 OS Cells through CD44 and Chemokine Signaling

Fan, L., Chen, P., Zhu, X., Liang, Y., Xu, T., Xu, P., & Wu, S. (2022) · Molecules · doi:10.3390/molecules27123714 · Cited by 12

Computational analysis of the oscillatory behavior at the translation level induced by mRNA levels oscillations due to finite intracellular resources

Zarai, Y., & Tuller, T. (2018) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1006055 · Cited by 12

Recent insights into mechanisms preventing ectopic centromere formation

Dong, Q., Yang, J., Gao, J., & Li, F. (2021) · Open Biology · doi:10.1098/rsob.210189 · Cited by 11

Aberrant APOBEC3B Expression in Breast Cancer Is Linked to Proliferation and Cell Cycle Phase

Roelofs, P. A., Timmermans, M. A. M., Stefanovska, B., den Boestert, M. A., van den Borne, A. W. M., Balcioglu, H. E., Trapman-Jansen, A., Harris, R. S., Martens, J. W. M., & Span, P. N. (2023) · Cells · doi:10.3390/cells12081185 · Cited by 14

OGFOD1 is required for breast cancer cell proliferation and is associated with poor prognosis in breast cancer

Kim, J. H., Lee, S.-M., Lee, J., Chun, S., Kang, B.-H., Kwak, S., Roe, J., Kim, T. W., Kim, H., Kim, W. H., et al. (2015) · Oncotarget · doi:10.18632/oncotarget.3683 · Cited by 12

Expression of Forkhead box M1 in soft tissue leiomyosarcoma: Clinicopathologic and in vitro study using a newly established cell line

Maekawa, A., Kohashi, K., Setsu, N., Kuda, M., Iura, K., Ishii, T., Matsunobu, T., Nakatsura, T., Iwamoto, Y., & Oda, Y. (2015) · Cancer Science · doi:10.1111/cas.12846 · Cited by 12

Cancer cell line specific co-factors modulate the FOXM1 cistrome

Wang, Y., Ung, M. H., Xia, T., Cheng, W., & Cheng, C. (2017) · Oncotarget · doi:10.18632/oncotarget.20405 · Cited by 11

Signal Pathways and microRNAs in Osteosarcoma Growth and the Dual Role of Mesenchymal Stem Cells in Oncogenesis

Тодосенко, Н. М., Хлусов, И. А., Yurova, K. A., Хазиахматова, О. Г., & Litvinova, L. S. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24108993 · Cited by 13

Analysis of five deep-sequenced trio-genomes of the Peninsular Malaysia Orang Asli and North Borneo populations

Deng, L., Lou, H., Zhang, X., Thiruvahindrapuram, B., Lu, D., Marshall, C. R., Liu, C., Xie, B., Xu, W., Wong, L. P., et al. (2019) · BMC Genomics · doi:10.1186/s12864-019-6226-8 · Cited by 12

Towards understanding the Regulation of Histone H1 Somatic Subtypes with OMICs

Ponte, I., Andrés, M., Jordan, A., & Roque, A. (2020) · Journal of Molecular Biology · doi:10.1016/j.jmb.2020.166734 · Cited by 11

Sirtuin 5 Is Regulated by the SCF Cyclin F Ubiquitin Ligase and Is Involved in Cell Cycle Control

Mills, C. A., Wang, X., Bhatt, D. P., Grimsrud, P. A., Matson, J. P., Lahiri, D., Burke, D. J., Cook, J. G., Hirschey, M. D., & Emanuele, M. J. (2020) · Molecular and Cellular Biology · doi:10.1128/mcb.00269-20 · Cited by 11

Cell cycle transcriptomics of Capsaspora provides insights into the evolution of cyclin-CDK machinery

Pérez-Posada, A., Dudin, O., Ocaña‐Pallarès, E., Ruiz‐Trillo, I., & Ondračka, A. (2020) · PLoS Genetics · doi:10.1371/journal.pgen.1008584 · Cited by 11

Bromodomain protein BRD4 directs mitotic cell division of mouse fibroblasts by inhibiting DNA damage

Wu, T., Hou, H., Dey, A., Bachu, M., Chen, X., Wiśniewski, J., Kudoh, F., Chen, C., Chauhan, S., Xiao, H., et al. (2024) · iScience · doi:10.1016/j.isci.2024.109797 · Cited by 14

Head-to-head comparisons of Toxoplasma gondii and its near relative Hammondia hammondi reveal dramatic differences in the host response and effectors with species-specific functions

Wong, Z. S., Sokol-Borrelli, S. L., Olias, P., Dubey, J. P., & Boyle, J. P. (2020) · PLoS Pathogens · doi:10.1371/journal.ppat.1008528 · Cited by 10

A novel FoxM1-PSMB4 axis contributes to proliferation and progression of cervical cancer

Zhou, D., Liu, J., Liu, F., Luo, G.-W., Li, H.-T., Zhang, R., Chen, B., & Hua, W. (2019) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2019.10.183 · Cited by 9

Integrative Functional Genomic Analysis of Molecular Signatures and Mechanistic Pathways in the Cell Cycle Underlying Alzheimer’s Disease

Zhou, Z., Bai, J., Zhong, S., Zhang, R., Kang, K., Zhang, X., Xu, Y., Zhao, C., & Zhao, M. (2021) · Oxidative Medicine and Cellular Longevity · doi:10.1155/2021/5552623 · Cited by 9

Connecting virulence pathways to cell-cycle progression in the fungal pathogen Cryptococcus neoformans

Kelliher, C., & Haase, S. B. (2017) · Current Genetics · doi:10.1007/s00294-017-0688-5 · Cited by 12

Mechanistic Insights into the Preference for Tandem Binding Sites in DNA Recognition by FOXM1

Zhang, H., Dai, S., Liang, X., Li, J., & Chen, Y. (2021) · Journal of Molecular Biology · doi:10.1016/j.jmb.2021.167426 · Cited by 8

Silencing of CDK2, but not CDK1, separates mitogenic from anti-apoptotic signaling, sensitizing p53 defective cells for synthetic lethality

Nekova, T. S., Kneitz, S., Einsele, H., Bargou, R. C., & Stuhler, G. (2016) · Cell Cycle · doi:10.1080/15384101.2016.1241915 · Cited by 8

A neural network-based model framework for cell-fate decisions and development

Paczkó, M., Vörös, D., Szabó, P., Jékely, G., Szathmáry, E., & Szilágyi, A. (2024) · Communications Biology · doi:10.1038/s42003-024-05985-1 · Cited by 8

Identification of SLC7A1 as a potential therapeutic target for high-grade meningioma

Song, L., Li, X., Li, D., Tian, K., Wang, K., Zhang, J., Wang, L., & Wu, Z. (2025) · Cell Death Discovery · doi:10.1038/s41420-025-02783-4 · Cited by 5

Elucidation of Factors Affecting the Age-Dependent Cancer Occurrence Rates

Xiao, J., Cao, Y., Li, X., Xu, L., Wang, Z., Huang, Z., Mu, X., Qu, Y., & Xu, Y. (2024) · International Journal of Molecular Sciences · doi:10.3390/ijms26010275 · Cited by 5

Understanding the unimodal distributions of cancer occurrence rates: it takes two factors for a cancer to occur

Qiu, S., An, Z., Tan, R., He, P., Jing, J., Li, H., Wu, S., & Xu, Y. (2020) · Briefings in Bioinformatics · doi:10.1093/bib/bbaa349 · Cited by 5

Genome-wide screen of cell-cycle regulators in normal and tumor cells identifies a differential response to nucleosome depletionPreprint

Sokolova, M., Turunen, M. M., Mortusewicz, O., Kivioja, T., Herr, P., Vähärautio, A., Björklund, M., Taipale, M., Helleday, T., & Taipale, J. (2016) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/060350 · Cited by 5

Computational challenges of cell cycle analysis using single cell transcriptomics

Chervov, A., & Zinovyev, A. (2022) · arXiv · doi:10.48550/arxiv.2208.05229 · Cited by 4

Cell cycle regulated transcription: from yeast to cancer

McInerny, C. (2016) · F1000Research · doi:10.12688/f1000research.8111.1 · Cited by 4

BRD4 directs mitotic cell division by inhibiting DNA damagePreprint

Wu, T., Hou, H., Dey, A., Bachu, M., Chen, X., Wiśniewski, J., Kudoh, F., Chen, C., Chauhan, S., Xiao, H., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.07.02.547436 · Cited by 4

Exploring the Nottingham classification: assessing gene expression profiles in breast cancer patients and their association with outcomes

de Freitas, A. J. A., Causin, R. L., Calfa, S., Santana, I. V. V., Balie, M., Hirai, W. Y., Laus, A. C., Araújo, H. S., Filho, C. M. T. H., Bombarda, F. D. O., et al. (2025) · Breast Cancer Research and Treatment · doi:10.1007/s10549-025-07718-2 · Cited by 3

Forkhead Box Proteins Modulate Fusarium Development, Pathogenicity, and Fungicide Sensitivity in Transcription-Dependent and -Independent Ways

Wang, J., Sun, Z., Liu, S., Li, B., Chen, Y., & Ma, Z. (2025) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.5c02380 · Cited by 3

Defining epitranscriptomic hallmarks at the host-parasite interface and their roles in virulence and disease progression in Theileria annulata-infected leukocytes

Haidar, M., Mourier, T., Salunke, R. P., Kaushik, A., Rached, F. B., Mfarrej, S., & Pain, A. (2025) · Biomedical Journal · doi:10.1016/j.bj.2025.100828 · Cited by 3

MAD1 upregulation sensitizes to inflammation-mediated tumor formation

Copeland, S. E., Snow, S., Wan, J., Matkowskyj, K. A., Halberg, R. B., & Weaver, B. A. A. (2024) · PLoS Genetics · doi:10.1371/journal.pgen.1011437 · Cited by 3

Enhanced identification of significant regulators of gene expression

Ehsani, R., & Drabløs, F. (2020) · BMC Bioinformatics · doi:10.1186/s12859-020-3468-z · Cited by 3

Expression of Forkhead Box M1 and Anticancer Effects of FOXM1 Inhibition in Epithelioid Sarcoma

Shibui, Y., Kohashi, K., Hino, Y., Tamaki, A., Kinoshita, I., Yamamoto, H., Nakashima, Y., Tajiri, T., & Oda, Y. (2024) · Laboratory Investigation · doi:10.1016/j.labinv.2024.102093 · Cited by 2

Schizophrenia risk gene ZNF536 modulates retinoic acid response and neuronal gene networks in SH-SY5Y cells

Kurishev, A. O., Abashkin, D. A., Karpov, D. S., Marilovtseva, E. V., Chaika, Y. A., Semina, E. V., & Голимбет, В. Е. (2025) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2025.1671354 · Cited by 3

Modeling periodic transcriptions in tandem gene systems

Wu, W., Tan, S., Tang, M., & Sun, Q. (2026) · Mathematical Biosciences · doi:10.1016/j.mbs.2026.109648 · Cited by 2

Role of MTDH, FOXM1 and microRNAs in Drug Resistance in Hepatocellular Carcinoma

Meng, X., Devor, E. J., Yang, S., Schickling, B., & Leslie, K. K. (2014) · Diseases · doi:10.3390/diseases2030209 · Cited by 2

GENAVOS: A New Tool for Modelling and Analyzing Cancer Gene Regulatory Networks Using Delayed Nonlinear Variable Order Fractional System

Yaghoobi, H., Maghooli, K., Asadi-Khiavi, M., & Dabanloo, N. J. (2021) · Symmetry · doi:10.3390/sym13020295 · Cited by 2

Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

Panchy, N. L., Lloyd, J. P., & Shiu, S. (2020) · BMC Genomics · doi:10.1186/s12864-020-6554-8 · Cited by 2

High resolution profiling of cell cycle-dependent protein and phosphorylation abundance changes in non-transformed cellsPreprint

Rega, C., Tsitsa, I., Roumeliotis, T. I., Krystkowiak, I., Portillo, M. G., Yu, L., Vorhauser, J., Pines, J., Mansfeld, J., Choudhary, J. S., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.06.20.599917 · Cited by 2

Plastic chemicals disrupt molecular circadian rhythms via adenosine 1 receptor in vitro

McPartland, M., Ashcroft, F. J., & Wagner, M. (2025) · Environment International · doi:10.1016/j.envint.2025.109422 · Cited by 1

Loss of negative regulation by HDAC1 and REST contributes to MAD1 overexpression in breast cancer

Copeland, S. E., Chen, B., Roopra, A., & Weaver, B. A. A. (2025) · Molecular Biology of the Cell · doi:10.1091/mbc.e24-12-0582 · Cited by 1

B-MYB (MYBL2): from cell cycle regulator to an oncogenic player

Miranda, A., Oliveira, P. A., Mergny, J., & Cruz, C. (2026) · Biochimica et Biophysica Acta (BBA) - Reviews on Cancer · doi:10.1016/j.bbcan.2026.189697 · Cited by 1

The Role of Long Non-coding RNAs in Melanoma Genesis and Progression

Joshi, P. K., & Perera, R. J. (2019) · Springer eBooks · doi:10.1007/978-3-030-17086-8_5 · Cited by 1

Pluripotency‐associated genes reposition during early embryonic developmental stages in pigs

Nguyen, H. T., Nghĩa, N. T., Lien, N. T. H., Dang‐Nguyen, T. Q., Men, N. T., Linh, N. V., Nguyen, B. X., Noguchi, J., Kaneko, H., & Kikuchi, K. (2020) · Animal Science Journal · doi:10.1111/asj.13408 · Cited by 1

A transcription factor signature predicts the survival of patients with adrenocortical carcinoma

Zhao, J., Liu, B., & Li, X. (2021) · PeerJ · doi:10.7717/peerj.12433 · Cited by 1

CD99 contributes to the EWS::FLI1 transcriptome by specifically affecting FOXM1‐targets involved in the G2/M cell cycle phase, thus influencing the Ewing sarcoma genetic landscape

Pasello, M., Laginestra, M. A., Manara, M. C., Landuzzi, L., Ruzzi, F., Maioli, M., Pellegrini, E., Feo, A. D., Lollini, P., & Scotlandi, K. (2024) · Journal of Cell Communication and Signaling · doi:10.1002/ccs3.12047 · Cited by 2

Dynamic metabolic network modeling of a mammalian cell cycle using time-course multi-omics dataPreprint

Lee, H., Shen, F., Eames, A., Jedrychowski, M. P., & Chandrasekaran, S. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.10.11.464012 · Cited by 1

Cell-cycle dynamics of nascent transcription and mature RNA accumulation are concordant in normal fibroblastsPreprint

Gucwa, M. E., & Ikegami, K. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.09.12.675830 · Cited by 1

Potential use of Aneustat for improvement of docetaxel-based therapy of advanced prostate cancer

Qu, S. (2017) · cIRcle (University of British Columbia) · doi:10.14288/1.0357970

Spatiotemporal dissection of the cell cycle regulated human proteomePreprint

Mahdessian, D., Sullivan, D. P., Danielsson, F., Arif, M., Zhang, C., Åkesson, L., Gnann, C., Shutten, R., Thul, P. J., Carja, O., et al. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/54323

Coordination of Replication-Coupled Protein Destruction and Origin Licensing Control During Cell Cycle Transitions

Coleman, K. E. (2019) · Carolina Digital Repository (University of North Carolina at Chapel Hill) · doi:10.17615/nhap-ah54

TRANSCRIPTOME DYNAMICS DURING THE MAMMALIAN CELL CYCLE

Dominguez, D. I. (2019) · Carolina Digital Repository (University of North Carolina at Chapel Hill) · doi:10.17615/ywd6-yy26

Gradual evolution of cell cycle regulation by cyclin-dependent kinases during the transition to animal multicellularityPreprint

Pérez-Posada, A., Dudin, O., Ocaña‐Pallarès, E., Ruiz‐Trillo, I., & Ondračka, A. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/719534

Pre-Phaser

Yurovsky, A., Futcher, B., & Skiena, S. (2019) · ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB) · doi:10.1145/3307339.3342174

A database of integrated molecular and phytochemical interactions of the foxm1 pathway for lung cancer

Kurubanjerdjit, N., & Ng, K. (2020) · Journal of Biomolecular Structure and Dynamics · doi:10.1080/07391102.2020.1810777

Exosomes of Adipose-derived Stem Cells Conditioned Media Promotes Retinoblastoma and Forkhead-Box M1 Protein Expression

Murlistyarini, S., Aninda, L. P., Widyarti, S., Endharti, A. T., & Sardjono, T. W. (2021) · Open Access Macedonian Journal of Medical Sciences · doi:10.3889/oamjms.2021.6195

IK : A novel cell mitosis regulator that contributes to carcinogenesis

Gao, C., Han, Y., Bai, L., Wang, Y., & Xue, F. (2021) · Cell Biochemistry and Function · doi:10.1002/cbf.3660

Gene expression in sight

Sonneveld, S. (2021) · Utrecht University Repository (Utrecht University) · doi:10.33540/858

Cross-Reactivity of N6AMT1 Antibodies with Aurora Kinase A: An Example of Antibody-Specific Non-Specificity

Brūmele, B., Serova, E., Lupp, A., Suija, M., Mutso, M., & Kurg, R. (2024) · Antibodies · doi:10.3390/antib13020033

5’UTR translational inhibition of neuroblastoma dependency factors using the CR-1-31-B rocaglatePreprint

Nunes, C., Bekaert, S., Parsa, S., Nelen, I. H., Martens, F., de Stanchina, E., Sanders, E., Hilgert, E., T’Sas, S., Zhao, P., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.08.29.610236

FOXM1 Expression in Invasive Ductal Breast Carcinoma of No Special Type: Insights from RNA-seq and Immunohistochemical AnalysisPreprint

Ohara, M., Mikami, E., Inohana, W., Kurosawa, T., Nakame, A., Sakakibara, A., Ichinose, Y., Fujimoto, A., Nukui, A., Asano, A., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.09.07.674683

Mécanisme de la dérégulation du cycle cellulaire de l'hôte par Staphylococcus aureus

Filho, R. A. E.-A. (2016) · theses.fr (ABES) · doi:10.70675/b70c6d72ze5c0z4af3z87c8z7b08750d4d97

Implication de la voie p53 dans les syndromes d'insuffisance médullaire

Toufektchan, E. (2018) · theses.fr (ABES) · doi:10.70675/58dfec7cz94b0z449fz96a6z9051bf80c551

Remodelage génomique des sarcomes pléomorphes : caractérisation transcriptomique et agressivité tumorale

Lesluyes, T. (2019) · theses.fr (ABES) · doi:10.70675/b51ecfa3ze0d6z4db0zb92fz6d0bb0848514

Entre cycle cellulaire et réponse aux dommages à l'ADN : fonctions de la protéine F-box FBL17 chez Arabidopsis thaliana

Gentric, N. (2020) · doi:10.70675/edd9a2d7za6dcz4932z99d7z973957d1f590

Couplage temporel entre la réplication et l’entrée en mitose en conditions normales ou perturbées : rôles de la signalisation Chk1

Lebrec, V. (2021) · theses.fr (ABES) · doi:10.70675/23bc9a0ezaf94z4804z9f0eza46407769553

Robust integration of single-cell datasets with imbalanced modality composition

Sheng, Q., Zhou, Y., Zhu, F., Xu, L., & Jin, S. (2026) · Nature Communications · doi:10.1038/s41467-026-72933-4 · Cited by 1

Lack of evidence for transcription-to-RNA maturation lags across G1-to-G2-phase boundary in fibroblasts

Gucwa, M. E., & Ikegami, K. (2026) · Life Science Alliance · doi:10.26508/lsa.202603670

The role of MELK in cancer: mechanisms and therapeutic options

Jangir, K., Patidar, P., Baweja, B., Vats, P., Saini, C., Kumar, N., Soni, R., Kumar, A., & Nema, R. (2026) · Frontiers in Oncology · doi:10.3389/fonc.2026.1938187

Processed data and code for Manuscript: Global quantification of mammalian gene expression noise

Welter, A. S., Mutschler, F., Simon, M. C., Giacomelli, C., Branscheid, A.-C., Manukyan, A., Alves, L. G. T., Gerwien, M., Kerridge, R., Landthaler, M., et al. (2026) · Zenodo (CERN European Organization for Nuclear Research) · doi:10.5281/zenodo.20067989

The Forkhead Transcription Factor FOXM1 Controls Cell Cycle- Dependent Gene Expression through an Atypical Chromatin Binding Mechanism

Engelandb, K. (2016)

Live-cell monitoring of periodic gene expression in synchronous human cells identifies Forkhead genes involved in cell cycle control

Grant, G. D., Gamsby, J. J., Martyanov, V., Brooks, L., George, L. K., Mahoney, J. M., Loros, J., Dunlap, J., & Whitfield, M. L. (2012) · Molecular Biology of the Cell · doi:10.1091/mbc.e11-02-0170 · Cited by 32

Predicting FOXM1-Mediated Gene Regulation through the Analysis of Genome-Wide FOXM1 Binding Sites in MCF-7, K562, SK-N-SH, GM12878 and ECC-1 Cell Lines

Kang, K., Choi, Y., Kim, H. H., Yoo, K. H., & Yu, S. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21176141 · Cited by 24

Regulation of the transcription factor FOXM1c by Cyclin E/CDK2

Lüscher‐Firzlaff, J., Lilischkis, R., & Lüscher, B. (2006) · FEBS Letters · doi:10.1016/j.febslet.2006.02.021 · Cited by 74

Forkhead (FOX) Transcription Factors and the Cell Cycle: Measurement of DNA Binding by FoxO and FoxM Transcription Factors

Bicknell, K. A. (2004) · Humana Press eBooks · doi:10.1385/1-59259-857-9:247 · Cited by 15