The Sequence Alignment/Map format and SAMtools

Li, Heng, Handsaker, Bob, Wysoker, Alec, Fennell, Tim, Ruan, Jue, Homer, Nils, Marth, Gabor, Abecasis, Goncalo +2 more·2009·Bioinformatics
DOI 10.1093/bioinformatics/btp352

Cited by (1,715)

Items 1,701–1,715 of 1,715

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  2. Enhancer grammar of liver cell types and hepatocyte zonation states
    González-Blas, Carmen Bravo, Matetovici, Irina, Hillen, Hanne, Taskiran, Ibrahim Ihsan, Vandepoel, Roel, Christiaens, Valerie, Sansores-García, Leticia, Verboven, Elisabeth, Hulselmans, Gert, Poovathingal, Suresh et al. · 2022
  3. <i>TDP1</i> splice-site mutation causes HAP1 cell hypersensitivity to topoisomerase I inhibition
    Goh, Chen Gang, Bader, Aldo S, Tran, Tuan-Anh, Belotserkovskaya, Rimma, D’Alessandro, Giuseppina, Jackson, Stephen P · 2025 · Nucleic Acids Research
  4. Interface of Human/Wildlife Interactions: An Example of a Bold Coyote (Canis latrans) in Atlanta, GA, USA
    Mowry, Christopher B., Wilson, Lawrence A., vonHoldt, Bridgett M. · 2021 · Diversity
  5. A multiomics approach reveals RNA dynamics promote cellular sensitivity to DNA hypomethylation
    Ge, Alex Y., Arab, Abolfazl, Dai, Raymond, Navickas, Albertas, Fish, Lisa, Garcia, Kristle, Asgharian, Hosseinali, Goudreau, Jackson, Lee, Sean, Keenan, Kathryn et al. · 2024 · Scientific Reports
  6. Rare <i>TCF3</i> variants associated with pediatric B cell acute lymphoblastic leukemia
    Miyamoto, Satoshi, Urayama, Kevin Y., Arakawa, Yuki, Koh, Katsuyoshi, Yuza, Yuki, Hasegawa, Daisuke, Taneyama, Yuichi, Noguchi, Yasushi, Yanagimachi, Masakatsu, Inukai, Takeshi et al. · 2024 · Pediatric Hematology and Oncology
  7. Chromosome-level genome assembly of the glass catfish (&lt;i&gt;Kryptopterus vitreolus&lt;/i&gt;) reveals molecular clues to its transparent phenotype
    Bian, Chao, 深圳大学生命与海洋科学学院水产基因组学实验室, 广东 深圳 518057, 中国, Laboratory of Aquatic Genomics, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, Guangdong 518057, China, Li, Rui-Han, Ruan, Zhi-Qiang, Chen, Wei-Ting, Huang, Yu, Liu, Li-Yue, Zhou, Hong-Ling, Chong, Cheong-Meng et al. · 2024 · Zoological Research
  8. Draft Genome Assembly of an Iconic Arctic Species: Muskox (Ovibos moschatus)
    Prewer, Erin, Kutz, Susan, Leclerc, Lisa-Marie, Kyle, Christopher J. · 2022 · Genes
  9. Type 1 interferon perturbates clonal competition by reshaping human blood development
    Lama, Chhiring, Isakov, Danielle, Rosenberg, Shira, Quijada-Álamo, Miguel, Saurty-Seerunghen, Mirca S., Moein, Sara, Nozais, Mathis, Abera, Tsega-Ab, Sakaguchi, Olivia, Totwani, Mansi et al. · 2026 · Nature Genetics
  10. Revisiting Aurochs Haplogroup C: Paleogenomic Perspectives from Northeastern China
    Zhu, Yan, Hou, Xindong, Zhao, Jian, Xiao, Bo, Song, Shiwen, Zou, Xinzhe, Liu, Sizhao, Hofreiter, Michael, Lai, Xulong · 2025 · Genes
  11. High-quality mouse reference genomes reveal the structural complexity of the murine protein-coding landscape
    Helmy, Mohab, Li, Jin U., Yan, Xinyu F., Meade, Rachel K., Anderson, Elizabeth, Chen, Patrick B., Czechanski, Anne M., Di Domenico, Tomás, Flint, Jonathan, Garrison, Erik et al. · 2026 · Cell Genomics
  12. Hepatocyte Cell Cycle Progression Depends on a Transcriptional Repressor Cascade Downstream of Wnt Signaling
    Jin, Yinhua, Anbarchian, Teni, Wu, Peng, Sarkar, Abby, Fish, Matt, Nusse, Roel · 2021
  13. CDK8 fine-tunes IL-6 transcriptional activities by limiting STAT3 resident time at the gene loci
    Martinez-Fabregas, J., Wang, L., Pohler, E., Cozzani, A., Kazemian, M., Mitra, S., Moraga, I. · 2020
  14. Genome-wide ribonucleotide detection in <i>Archaea</i>
    Moalic, Yann, Reveil, Maurane, Kundnani, Deepali L, Balachander, Sathya, Yang, Taehwan, Gombolay, Alli, Ranjbarian, Farahnaz, Brizard, Raphael, Durand, Patrick, Myllykallio, Hannu et al. · 2025 · Nucleic Acids Research
  15. The Wor2 phenotypic switching regulator controls biofilm formation in Candida auris
    Liang, Weihong, Guan, Shuyun, Bing, Jian, Du, Han, Zheng, Qiushi, Tao, Li, Li, Bing, Huang, Guanghua, Chu, Haiqing · 2026 · npj Biofilms and Microbiomes