HTSeq—a Python framework to work with high-throughput sequencing data

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Low-Dose Radiotherapy Reverses Tumor Immune Desertification and Resistance to Immunotherapy

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Bacterial seed endophyte shapes disease resistance in rice

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Human-Specific NOTCH2NL Genes Expand Cortical Neurogenesis through Delta/Notch Regulation

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Atopic Dermatitis Is an IL-13–Dominant Disease with Greater Molecular Heterogeneity Compared to Psoriasis

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Combined Single-Cell Functional and Gene Expression Analysis Resolves Heterogeneity within Stem Cell Populations

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BET Bromodomain Proteins Function as Master Transcription Elongation Factors Independent of CDK9 Recruitment

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A stromal cell population that inhibits adipogenesis in mammalian fat depots

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Epigenetic regulation of brain region-specific microglia clearance activity

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A Menin-MLL Inhibitor Induces Specific Chromatin Changes and Eradicates Disease in Models of MLL-Rearranged Leukemia

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The structural basis for cohesin–CTCF-anchored loops

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Design and computational analysis of single-cell RNA-sequencing experiments

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Polyploidy can drive rapid adaptation in yeast

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Vitamin A-Retinoic Acid Signaling Regulates Hematopoietic Stem Cell Dormancy

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COVID-19–related Genes in Sputum Cells in Asthma. Relationship to Demographic Features and Corticosteroids

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Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition

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Activated PMN Exosomes: Pathogenic Entities Causing Matrix Destruction and Disease in the Lung

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Therapeutic targeting of polycomb and BET bromodomain proteins in diffuse intrinsic pontine gliomas

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Distinct amyloid-β and tau-associated microglia profiles in Alzheimer’s disease

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Tumor-infiltrating lymphocyte treatment for anti-PD-1-resistant metastatic lung cancer: a phase 1 trial

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Human cardiac organoids for the modelling of myocardial infarction and drug cardiotoxicity

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A model of breast cancer heterogeneity reveals vascular mimicry as a driver of metastasis

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Treg cell-derived osteopontin promotes microglia-mediated white matter repair after ischemic stroke

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Transcription Impacts the Efficiency of mRNA Translation via Co-transcriptional N6-adenosine Methylation

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T cell fate and clonality inference from single-cell transcriptomes

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RNA 5-Methylcytosine Facilitates the Maternal-to-Zygotic Transition by Preventing Maternal mRNA Decay

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Expression Atlas: gene and protein expression across multiple studies and organisms

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A non-canonical SWI/SNF complex is a synthetic lethal target in cancers driven by BAF complex perturbation

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Fasting Activates Fatty Acid Oxidation to Enhance Intestinal Stem Cell Function during Homeostasis and Aging

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Genome-scale deletion screening of human long non-coding RNAs using a paired-guide RNA CRISPR–Cas9 library

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Benchmarking of RNA-sequencing analysis workflows using whole-transcriptome RT-qPCR expression data

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Senescence-Induced Vascular Remodeling Creates Therapeutic Vulnerabilities in Pancreas Cancer

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MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing

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The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition

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Yeast Creates a Niche for Symbiotic Lactic Acid Bacteria through Nitrogen Overflow

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Single-cell RNA-seq reveals the diversity of trophoblast subtypes and patterns of differentiation in the human placenta

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Single-cell RNA-seq uncovers dynamic processes and critical regulators in mouse spermatogenesis

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ADAR1 masks the cancer immunotherapeutic promise of ZBP1-driven necroptosis

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The DNA methyltransferase DNMT3C protects male germ cells from transposon activity

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Molecular Classification of Hepatocellular Adenoma Associates With Risk Factors, Bleeding, and Malignant Transformation

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NK cell–mediated cytotoxicity contributes to tumor control by a cytostatic drug combination

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Site-specific manipulation of Arabidopsis loci using CRISPR-Cas9 SunTag systems

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Peripherally derived macrophages can engraft the brain independent of irradiation and maintain an identity distinct from microglia

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NOX4 inhibition potentiates immunotherapy by overcoming cancer-associated fibroblast-mediated CD8 T-cell exclusion from tumors

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The Role of m6A/m-RNA Methylation in Stress Response Regulation

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Trans-presentation of IL-6 by dendritic cells is required for the priming of pathogenic TH17 cells

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Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals

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Photoperiodic control of seasonal growth is mediated by ABA acting on cell-cell communication

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Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus

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Helminth infection promotes colonization resistance via type 2 immunity

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The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest

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Reducing Astrocyte Calcium Signaling In Vivo Alters Striatal Microcircuits and Causes Repetitive Behavior

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Microbial signals drive pre-leukaemic myeloproliferation in a Tet2-deficient host

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The type VI secretion system of Vibrio cholerae fosters horizontal gene transfer

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Mediator kinase inhibition further activates super-enhancer-associated genes in AML

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Reducing Pericyte-Derived Scarring Promotes Recovery after Spinal Cord Injury

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Microplastics induce transcriptional changes, immune response and behavioral alterations in adult zebrafish

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Genomic basis for RNA alterations in cancer

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Gene regulatory networks controlling vertebrate retinal regeneration

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Spatial deconvolution of HER2-positive breast cancer delineates tumor-associated cell type interactions

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