The human oral microbiome database: a web accessible resource for investigating oral microbe taxonomic and genomic information

Chen, T., Yu, W.-H., Izard, J., Baranova, O. V., Lakshmanan, A., Dewhirst, F. E.·2010·Database

DOI 10.1093/database/baq013

Cited by (999)

Items 601–700 of 999

Comparison of initial oral microbiomes of young adults with and without cavitated dentin caries lesions using an in situ biofilm model
Stefan Rupf, Cedric Christian Laczny, Valentina Galata, Christina Backes, Andreas Keller, Natalia Umanskaya, Arzu Erol, Sascha Tierling, Christina Lo Porto, Jörn Walter et al. · 2018 · Scientific Reports
Dysbiosis of the Oral Ecosystem in Severe Congenital Neutropenia Patients
Egija Zaura, Bernd Willem Brandt, Mark J. Buijs, Gülnur Emingil, Merve Ergüz, Deniz Yılmaz Karapınar, Burç Pekpinarli, Kai Bao, Georgios N. Belibasakis, Nagihan Bostancı · 2020 · PROTEOMICS - CLINICAL APPLICATIONS
A Multidimensional Approach to the Management of Severe Asthma: Inflammometry, Molecular Microbiology and Bronchial Thermoplasty
Conor Cox, Melanie Kjarsgaard, Michael Gordon Surette, Gerard Cox, Parameswaran K. Nair · 2015 · Canadian Respiratory Journal
Retrospective study of microorganisms associated with vascular access infections in hemodialysis patients
Sandra D'Amato-Palumbo, André A. Kaplan, Richard Feinn, Rajesh V. Lalla · 2012 · Oral Surgery Oral Medicine Oral Pathology and Oral Radiology
Effect of erythritol on microbial ecology of in vitro gingivitis biofilms
Marleen Marga Janus, C.M.C. Volgenant, Bernd Willem Brandt, Mark J. Buijs, Bart J. F. Keijser, Wim Crielaard A, Egija Zaura, Bastiaan Philip Krom · 2017 · Journal of Oral Microbiology
BacPaCS—Bacterial Pathogenicity Classification via Sparse-SVM
Eran Barash, Neta Sal‐Man, Sivan Sabato A, Michal Ziv-Ukelson · 2018 · Bioinformatics
Peri‐implant mucositis sites with suppuration have higher microbial risk than sites without suppuration
Qi Wang, Hongye Lu, Li Zhang, Xia Yan, Bin Zhu, Huanxin Meng · 2020 · Journal of Periodontology
Metagenomic characterization of oral microbiome signatures to predict upper gastrointestinal and pancreaticobiliary cancers: a case–control study
Sujin Oh, Jaihwan Kim, Cheol Min Shin, Hyo‐Jung Lee, Hye Seung Lee, Kyoung Un Park · 2025 · Journal of Translational Medicine
Techniques for learning and transferring knowledge for microbiome-based classification and prediction: review and assessment
Jin Han, Haohong Zhang, Kang Ning · 2024 · Briefings in Bioinformatics
The Oral–Gut Microbiota Axis as a Mediator of Frailty and Sarcopenia
Domenico Azzolino, Margherita Carnevale Schianca, Lucrezia Bottalico, Marica Colella, Alessia Felicetti, Simone Perna, Leonardo Terranova, Franklin Garcı́a-Godoy, Mariangela Rondanelli, Pier Carmine Passarelli et al. · 2025 · Nutrients
MetaSee: An Interactive and Extendable Visualization Toolbox for Metagenomic Sample Analysis and Comparison
Baoxing Song, Xiaoquan Su, Jian Xu, Kang Ning · 2012 · PLoS ONE
Murine Salivary Amylase Protects Against Streptococcus mutans-Induced Caries
David J. Culp, Bently Robinson, Melanie N. Cash · 2021 · Frontiers in Physiology
Metagenomic evidence for a polymicrobial signature of sepsis
Cedric C.S. Tan, Mislav Acman, Lucy van Dorp, François Balloux · 2021 · Microbial Genomics
Comparison of Periodontal Bacteria of Edo and Modern Periods Using Novel Diagnostic Approach for Periodontitis With Micro-CT
Takahiko Shiba, Keiji Komatsu, Takeaki Sudo, Rikai Sawafuji, Aiko Saso, Shintaroh Ueda, Takayasu Watanabe, Takashi Nemoto, Chihiro Kano, Takahiko Nagai et al. · 2021 · Frontiers in Cellular and Infection Microbiology
Microbial community alteration in tongue squamous cell carcinoma
Peng Ye, Ye Liu, Ye-Jun Cai, Hong Yang, Hongtao Xu, Zhi-Yue Lu · 2021 · Applied Microbiology and Biotechnology
Tooth-Specific Streptococcus mutans Distribution and Associated Microbiome
Márcia Dinis, William Traynor, Melissa Agnello, Myung‐Shin Sim, Xuesong He, Wenyuan Shi, Renate Lux, Nini Chaichanasakul Tran · 2022 · Microorganisms
Metaproteomic Analysis of an Oral Squamous Cell Carcinoma Dataset Suggests Diagnostic Potential of the Mycobiome
Steven He, Rajdeep Chakraborty, Shoba Ranganathan · 2023 · International Journal of Molecular Sciences
Exploring the microbiome of oral epithelial dysplasia as a predictor of malignant progression
Robyn Wright, Michelle E. Pewarchuk, Erin A. Marshall, Benjamin Murrary, Miriam P. Rosin, Denise M. Laronde, Lewei Zhang, Wan L. Lam, Morgan G. I. Langille, Leigha D. Rock · 2023 · BMC Oral Health
Periodontitis and progression of gastrointestinal cancer: current knowledge and future perspective
Kamyar Nasiri, Masoud Amiri Moghaddam, Enas Abdalla Etajuri, Ashkan Badkoobeh, Omid Tavakol, Mohammadamin Rafinejad, Armita Forutan Mirhosseini, Amirhossein Fathi · 2023 · Clinical & Translational Oncology
SARS‐CoV‐2, periodontal pathogens, and host factors: The trinity of oral post‐acute sequelae of COVID‐19
JOEL L. SCHWARTZ, Kristelle J. Capistrano, Joseph Gluck, Armita Hezarkhani, Afsar Raza Naqvi · 2024 · Reviews in Medical Virology
Assessing the Iatrogenic Contribution to Contamination During Root Canal Treatment
Shatha S. Zahran, Francesco Mannocci, Garrit Koller · 2022 · Journal of Endodontics
Isolation of Alkaline-tolerant Bacteria from Primary Infected Root Canals
Hui Pau Lew, Samantha Yiling Quah, Jeen‐Nee Lui, Gunnar Bergenholtz, Victoria Soo Hoon Yu, Kai Soo Tan · 2015 · Journal of Endodontics
Subgingival microbiota of Sri Lankan tea labourers naïve to oral hygiene measures
Long‐Fei Zhuang, Rory Munro Watt, Sarah Steiner, Bich Hue Lang‐Hua, Ren Wang, Christoph A. Ramseier, Niklaus Peter Lang · 2014 · Journal Of Clinical Periodontology
Impact of Dental Plaque Biofilms in Periodontal Disease: Management and Future Therapy
V. Lazǎr, L. Dițu, C. Curuțiu, I. Gheorghe, A. Holban, M. Popa, C. Chifiriuc · 2017 · InTech eBooks
Oropharyngeal Microbiota in Frail Older Patients Unaffected by Time in Hospital
Victoria C. Ewan, William D. K. Reid, Mark Shirley, A. John Simpson, Steven Rushton, William G. Wade · 2018 · Frontiers in Cellular and Infection Microbiology
Comparability of microbiota of swabbed and spit saliva
Amke Marije Kaan, Bernd Willem Brandt, Mark J. Buijs, Wim Crielaard A, Bart J. F. Keijser, Egija Zaura · 2022 · European Journal Of Oral Sciences
Crosstalk between Body Microbiota and the Regulation of Immunity
Carolina Rojas, Felipe Gálvez‐Jirón, Javiera De Solminihac, Cristina Padilla, Ignacio Cárcamo, Natalia Villalón, Mónica Kurte, Karina Pino‐Lagos · 2022 · Journal of Immunology Research
Comparison of the Oral Microbiota Structure among People from the Same Ethnic Group Living in Different Environments
MA Guo-yun, Yanan Qiao, Han Yu Shi, Jianye Zhou, Yongming Li · 2022 · BioMed Research International
A Case Study for the Recovery of Authentic Microbial Ancient DNA from Soil Samples
Vilma Pérez, Yichen Liu, Martha Hengst, Laura Susan Weyrich · 2022 · Microorganisms
Metabolic capabilities are highly conserved among human nasal-associated Corynebacterium species in pangenomic analyses
Tommy H. Tran, Isabel F. Escapa, Ari Q. Roberts, Wei Gao, Abiola C. Obawemimo, Julia A. Segre, Heidi H. Kong, Sean Conlan, Matthew S. Kelly, Katherine P. Lemon · 2024 · mSystems
Microbiota Analysis of Biofilms on Experimental Abutments Mimicking Dental Implants: An In Vivo Model
B Cortes-Acha, Rui Figueiredo, Ramón Seminago, Francisco J. Roig, Carlos Lloréns, Eduard Valmaseda‐Castellón · 2017 · Journal of Periodontology
Gastric Helicobacter pylori infection perturbs human oral microbiota
Eng Guan Chua, Ju-Yee Chong, Binit Lamichhane, K. Mary Webberley, Barry James Marshall, Michael J. Wise, Chin Yen Tay · 2019 · PeerJ
Salivary Microbiota Shifts under Sustained Consumption of Oolong Tea in Healthy Adults
Zhibin Liu, Hongwen Guo, Wen Zhang, Li Ni · 2020 · Nutrients
Distinct Ecological Niche of Anal, Oral, and Cervical Mucosal Microbiomes in Adolescent Women.
Benjamin C. Smith, Christine P. Zolnik, Mykhaylo Usyk, Zigui Chen, Katherine Kaiser, Anne T. Nucci-Sack, Ken Peake, Ángela Díaz, V. Shankar, Howard D. Strickler et al. · 2016 · PubMed Central
Biobanking for human microbiome research: promise, risks, and ethics
Yonghui Ma, Hua Chen, Ruipeng Lei, Jianlin Ren · 2017 · Asian Bioethics Review
Response of Salivary Microbiota to Caries Preventive Treatment in Aboriginal and Torres Strait Islander Children
Emily Skelly, Newell Walter Johnson, Kostas Kapellas, Jeroen Kroon, Ratilal Lalloo, Laura Susan Weyrich · 2020 · Journal of Oral Microbiology
Evaluating Alterations of the Oral Microbiome and Its Link to Oral Cancer among Betel Quid Chewers: Prospecting Reversal through Probiotic Intervention
Prerna Diwan, Mohit Nirwan, Mayank Bahuguna, Shashi Prabha Kumari, James Wahlang, Rakesh Kumar Gupta · 2023 · Pathogens
Microbiome of diseased and healthy implants—a comprehensive microbial data analysis
Pingyi Jia, Xinran Guo, Jinchen Ye, Hongye Lu, Jingwen Yang, Jianxia Hou · 2024 · Frontiers in Cellular and Infection Microbiology
Pharmacometabolomics Informs Viromics toward Precision Medicine
Angeliki Balasopoulou, George P. Patrinos, Θεοδώρα Κάτσιλα · 2016 · Frontiers in Pharmacology
Similarity of salivary microbiome in parents and adult children
Kati Sundström, Pashupati Prasad Mishra, Mikko J. Pyysalo, Terho J. Lehtimäki, Pekka J. Karhunen, Tanja Pessi · 2020 · PeerJ
Site- and Time-Dependent Compositional Shifts in Oral Microbiota Communities
Anders Esberg, Linda Eriksson, Ingegerd Johansson · 2022 · Frontiers in Oral Health
Polymicrobial periodontal pathogen transcriptomes in calvarial bone and soft tissue
Vasudevan Bakthavatchalu, Archana Meka, Jeffrey J. Mans, S. Sathishkumar, María Cecilia López, Indraneel Bhattacharyya, B.F. Boyce, Henry V. Baker, Richard John Lamont, Jeffrey L. Ebersole et al. · 2011 · Molecular Oral Microbiology
Transcription Profiling Reveals Potential Mechanisms of Dysbiosis in the Oral Microbiome of Rhesus Macaques with Chronic Untreated SIV Infection
Susan Ocon, Christina Murphy, Angeline Tilly Dang, Sumathi Sankaran‐Walters, Chin‐Shang Li, Ross P. Tarara, Niku Borujerdpur, Satya Dandekar, Bruce J. Paster, Michael D. George · 2013 · PLoS ONE
Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola
Olov Svartström, Memoona Mushtaq, Märit Pringle, Bo Segerman · 2013 · PLoS ONE
Supplementary sampling of obturation materials enhances microbial analysis of endodontic treatment failures: a proof of principle study
Lamprini Karygianni, Annette Carola Anderson, Christian Tennert, K. Kollmar, Markus Jörg Altenburger, Elmar Hellwig, Ali Al‐Ahmad · 2014 · Clinical Oral Investigations
TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution
Robin R. Rohwer, Joshua J. Hamilton, Ryan J. Newton, Katherine D. McMahon · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
Alon Shaiber, Amy D. Willis, Tom O. Delmont, Simon Roux, Lin-Xing Chen, Abigail C. Schmid, Mahmoud Yousef, Andrea R. Watson, Karen Lolans, Özcan C. Esen et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
Science-Informed Health Policies for Oral and Systemic Health
Harold C. Slavkin, Peter DuBois, Dushanka V. Kleinman, Ralph Fuccillo · 2023 · Journal of Healthcare Leadership
Exploring the oral microbiome: an updated multidisciplinary oral healthcare perspective
Aman Chowdhry, Priyanka Kapoor, Deepak Bhargava, Dinesh Kumar Bagga · 2023 · Discoveries
Predicting preterm birth using machine learning techniques in oral microbiome
You Mi Hong, Jaewoong Lee, Dong Hyu Cho, Jung Hun Jeon, Jihoon Kang, Min‐Gul Kim, Semin Lee, Jin Kyu Kim · 2023 · Scientific Reports
Associations and recovery dynamics of the nasopharyngeal microbiota during influenza-like illness in the aging population
Sudarshan Anand Shetty, Josine van Beek, Elske Bijvank, James A. Groot, Sjoerd Kuiling, Thijs Bosch, Debbie van Baarle, Susana Fuentes · 2022 · Scientific Reports
Identification of Small-Molecule Inhibitors against Meso-2, 6-Diaminopimelate Dehydrogenase from Porphyromonas gingivalis
Victoria N. Stone, Hardik I. Parikh, Fadi El Rami, Xiuchun Ge, Weihau Chen, Yan Zhang, Glen E. Kellogg, Ping Xu · 2015 · PLoS ONE
Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains
Yongbiao Huo, Yuki Chan, Donnabella C. Lacap‐Bugler, S Mo, Patrick C. Y. Woo, Wai Keung Leung, Rory Munro Watt · 2016 · Applied and Environmental Microbiology
Comparative analysis of oral microbiome from Zang and Han populations living at different altitudes
Hao Yu, Can Tang, Qilian Du, Xuedong Zhou, Xian Peng, Lei Cheng · 2020 · Archives of Oral Biology
Recognition of DNA by the Helix-Turn-Helix Global Regulatory Protein Lrp Is Modulated by the Amino Terminus
Benjamin R. Hart, Pankaj Kumar Mishra, Robert E. Lintner, Jennifer M. Hinerman, Andrew B. Herr, Robert Blumenthal · 2011 · Journal of Bacteriology
The BBaRTS Healthy Teeth Behaviour Change Programme for preventing dental caries in primary school children: study protocol for a cluster randomised controlled trial
Cynthia M. Pine, Pauline Adair, Louise Robinson, Girvan Burnside, Paula J. Moynihan, William G. Wade, James O. Kistler, M.M.T. Curnow, Mary Henderson · 2016 · Trials
Genome-scale metabolic modelling of human gut microbes to inform rational community design
Juan Pablo Molina Ortiz, Dale David McClure, Andrew J. Holmes, Scott Alan Rice, Mark Norman Read, Erin Rose Shanahan · 2025 · Gut Microbes
Surface Characterization and Assessment of Biofilm Formation on Two Titanium-Based Implant Coating Materials
Bhumika Shokeen, Leila Zamani, Sara Zadmehr, Sevda Pouraghaie, Ryotaro Ozawa, Burak Yılmaz, Sam Lilak, Shivani Sharma, Takahiro Ogawa, Alireza Moshaverinia et al. · 2021 · Frontiers in Dental Medicine
The Association of Oral Microbiome Dysbiosis with Gastrointestinal Cancers and Its Diagnostic Efficacy
Pooria Asili, Maryam Mirahmad, Parisa Rezaei, Mohammad Mahdavi, B. Larijani, S. Tavangar · 2023 · Journal of Gastrointestinal Cancer
A Comparison of the Oral Microbiota in Healthy Dogs and Dogs with Oral Tumors
Anja Lisjak, Bruna Corrêa Lopes, Rachel Pilla, Ana Nemec, Jan S. Suchodolski, Nataša Tozon · 2023 · Animals
Synthetic-bioinformatic natural product-inspired peptides
Samantha L. Nelson, Elizabeth I. Parkinson · 2024 · Natural Product Reports
SKIOME Project: a curated collection of skin microbiome datasets enriched with study-related metadata
Giulia Agostinetto, Davide Bozzi, Danilo Porro, Maurizio Casiraghi, Massimo Labra, Antonia Bruno · 2022 · Database
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Cecilia Gonzales‐Marin, David A. Spratt, Michael R. Millar, Mark C. Simmonds, Stephen Terence Kempley, Robert Patrick Allaker · 2011 · Journal of Medical Microbiology
Evaluation of sample preparation methods for label-free quantitative profiling of salivary proteome
Xi Zhang, Pawel G. Sadowski, Chamindie Punyadeera · 2019 · Journal of Proteomics
Subgingival microbiome is associated with alveolar bone loss measured 5 years later in postmenopausal women
Michael J. LaMonte, Chris Andrews, Kathleen M. O'Reilly Hovey, Michael Joseph Buck, Lu Li, Daniel Ian McSkimming, Hailey R. Banack, Jane Rotterman, Yijun Sun, Keith Lough Kirkwood et al. · 2020 · Journal of Periodontology
The microbiome in reproductive health: protocol for a systems biology approach using a prospective, observational study design
Maria Christine Krog, Mette Elkjær Madsen, Sofie Bliddal, Zahra Bashir, Laura Emilie Vexø, Dorthe Hartwell, Luisa Warchavchik Hugerth, Emma Fransson, Marica Hamsten, Fredrik Boulund et al. · 2022 · Human Reproduction Open
The bacterial species profiles of the lingual and salivary microbiota differ with basic tastes sensitivity in human
Hélène Licandro, Caroline Truntzer, Sébastien Fromentin, Christian Morabito, Benoît Quinquis, Nicolas Pons, Christophe Martin, Hervé M. Blottière, Eric Neyraud · 2023 · Scientific Reports
Dysbiosis linking periodontal disease and oral squamous cell carcinoma-A brief narrative review
Swetha Acharya, U. Hegde, Anirudh B. Acharya, Priyanka Nitin · 2024 · Heliyon
Short term effect of antimicrobial photodynamic therapy and probiotic L. salivarius WB21 on halitosis: A controlled and randomized clinical trial
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Subgingival microbial profiles in pre‐ and postmenopausal women: Associations with serum estradiol levels
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Multi-way modelling of oral microbial dynamics and host-microbiome interactions during induced gingivitis
Geert Roelof van der Ploeg, Bernd Willem Brandt, Bart J. F. Keijser, Monique Harriët van der Veen, C.M.C. Volgenant, Egija Zaura, Age K. Smilde, Johan A. Westerhuis, Anna Heintz‐Buschart · 2024 · npj Biofilms and Microbiomes
Comparative evaluation of peptidome and microbiota in different types of saliva samples
Ce Zhu, Chao Yuan, Fangqiao Wei, Xiangyu Sun, Shu-Guo Zheng · 2020 · Annals of Translational Medicine
Exodontia associated bacteremia in horses characterized by next generation sequencing
Kile S. Townsend, Philip J. Johnson, Alison M. LaCarrubba, Lynn M. Martin, Aaron C. Ericsson · 2021 · Scientific Reports
Effect of antimicrobial photodynamic therapy with red led and methylene blue on the reduction of halitosis: controlled microbiological clinical trial
Ana Carolina Costa da Mota, Marcela Letícia Leal Gonçalves, Anna Carolina Ratto Tempestini Horliana, Alessandro Melo Deana, Lisyanne Araújo de Souza Cavalcante, Andréa Oliver Gomes, Márcia Pinto Alves Mayer, Ellen Sayuri Ando‐Suguimoto, Kristianne Porta Santos Fernandes, Raquel Agnelli Mesquita‐Ferrari et al. · 2021 · Lasers in Medical Science
The lower airways microbiome and antimicrobial peptides in idiopathic pulmonary fibrosis differ from chronic obstructive pulmonary disease
Kristel Svalland Knudsen, Sverre Lehmann, Rune Nielsen, Solveig Tangedal, Ingvild Haaland, Pieter Sicco Hiemstra, Tomas Eagan · 2022 · PLoS ONE
What Are We Learning and What Can We Learn from the Human Oral Microbiome Project?
Benjamin Cross, Roberta C. Faustoferri, Robert G. Quivey · 2016 · Current Oral Health Reports
rRNAFilter: A Fast Approach for Ribosomal RNA Read Removal Without a Reference Database
Ying Wang, Haiyan Hu, Xiaoman Li · 2016 · Journal of Computational Biology
Tissue-adhesive hydrogel–MXene biosensor for in situ intraoral TNF-α detection
Tsz Hung Wong, Weijia Liu, Jiaoli Li, Jie Ma, Yijie Cheng, Ruihao Lu, Kent J. Koster, Jeffrey D. Cirillo, Xinyue Liu, Hajime Sasaki et al. · 2026 · Science Advances
Compositional Variations between Adult and Infant Skin Microbiome: An Update
Barry Murphy, Michael Hoptroff, David Scott Arnold, Andrew Cawley, Emily Smith, Suzanne E. Adams, Alex Mitchell, Malcolm James Horsburgh, Joanne Hunt, Bivash R. Dasgupta et al. · 2023 · Microorganisms
Microbiota present in combined endodontic-periodontal diseases and its risks for endocarditis
Brenda Paula Figueiredo de Almeida Gomes, Vanessa Bellocchio Berber, V. M. Chiarelli‐Neto, Emelly Aveiro, Rafaela Casadei Chapola, Maicon R. Z. Passini, Erica M. Lopes, Tsute Chen, Bruce J. Paster · 2023 · Clinical Oral Investigations
Essential genes for Haemophilus parainfluenzae survival and biofilm growth
Thaís Harder de Palma, Chris Powers, Morgan J. McPartland, Jessica L. Mark Welch, Matthew M. Ramsey · 2024 · mSystems
Comparative genomics reveal a novel phylotaxonomic order in the genus Fusobacterium
Cristian Molteni, Diego Forni, Rachele Cagliani, Manuela Sironi · 2024 · Communications Biology
Oral microbiome diversity associates with carotid intima media thickness in middle-aged male subjects
Ramin Akhi, Anton Lavrinienko, Miia Hakula, Leo Tjäderhane, Rasmus Hindström, Antti E.T. Nissinen, Chunguang Wang, JUHA P. AUVINEN, Arja M. Kullaa, Pekka Ylöstalo et al. · 2025 · Communications Medicine
The cell envelope proteome of Aggregatibacter actinomycetemcomitans
K.P. Smith, Julia G. Fields, Richard Voogt, Bin Deng, Y‐W. Lam, Keith P. Mintz · 2014 · Molecular Oral Microbiology
An overview of major metagenomic studies on human microbiomes in health and disease
Hongfei Cui, Yingxue Li, Xuegong Zhang · 2016 · Quantitative Biology
"The dead shall be raised": Multidisciplinary analysis of human skeletons reveals complexity in 19th century immigrant socioeconomic history and identity in New Haven, Connecticut
Gary P. Aronsen, Lars Fehren‐Schmitz, John Krigbaum, George D. Kamenov, Gerald J. Conlogue, Christina Warinner, Andrew T. Ozga, Krithivasan Sankaranarayanan, Anthony Griego, Daniel W. DeLuca et al. · 2019 · PLoS ONE
Comparative Genome Analysis of the Daptomycin-Resistant Streptococcus anginosus Strain J4206 Associated with Breakthrough Bacteremia
Maliha Rahman, Scott V. Nguyen, Kimberly A. McCullor, Catherine J. King, James H. Jorgensen, W. Michael McShan · 2016 · Genome Biology and Evolution
Comparative analysis of Salivette® and paraffin gum preparations for establishment of a metaproteomics analysis pipeline for stimulated human saliva
Alexander Rabe, Manuela Gesell Salazar, Stephan Fuchs, Thomas Kocher, Uwe Völker · 2018 · Journal of Oral Microbiology
Characterization of oral yeasts isolated from healthy individuals attended in different Colombian dental clinics
Raúl Rivera, Alejandra Zuluaga, Karen Arango, Itzjak Kadar, Paola Andrea Pinillos, Luis Fernando Montes, Eugenia Catalina Cepeda, Ernesto A. Zavala González, Pedro Antonio Alfonso, Andrea Alejandra Villalba et al. · 2019 · Journal of Biomedical Research
Impact of an Enhanced Infection Control Protocol on the Microbial Community Profile in Molar Root Canal Treatment: An in Vivo NGS Molecular Study
Shatha S. Zahran, Francesco Mannocci, Garrit Koller · 2022 · Journal of Endodontics
NEMiD: A Web-Based Curated Microbial Diversity Database with Geo-Based Plotting
Kaushik Bhattacharjee, Santa Ram Joshi · 2014 · PLoS ONE
Comprehensive ecosystem-specific 16S rRNA gene databases with automated taxonomy assignment (AutoTax) provide species-level resolution in microbial ecology
Morten Simonsen Dueholm, Kasper Skytte Andersen, Francesca Petriglieri, Simon Jon McIlroy, Marta Nierychlo, Jette Fischer Petersen, Jannie Munk Kristensen, Erika Yashiro, Søren Michael Karst, Mads Albertsen et al. · 2019 · VBN Forskningsportal (Aalborg Universitet)
Human Oral Microbiome Database (HOMD)
Tsute Chen, Floyd E. Dewhirst · 2013 · Springer eBooks
Characterization of the salivary microbiome of adults with inflammatory bowel disease
Vanessa DeClercq, Robyn Wright, Johan Van Limbergen, Morgan G. I. Langille · 2025 · Journal of Oral Microbiology
Oral microbiome changes associated with the menstrual cycle in healthy young adult females
Ayaka Yamazaki, Kohei Ogura, Kana Minami, Kazuhiro Ogai, Tomomi Horiguchi, Shigefumi Okamoto, Kanae Mukai · 2023 · Frontiers in Cellular and Infection Microbiology
Periodontal disease and risk of Alzheimer's disease: A two‐sample Mendelian randomization
Conglei Hu, Hui Li, Liping Huang, Rui Wang, Zeyu Wang, Rui Ma, Bei Chang, Shiting Li, Hongcai Li, Guangwen Li · 2024 · Brain and Behavior
CMFHMDA: a prediction framework for human disease-microbe associations based on cross-domain matrix factorization
Jing Chen, Ran Tao, Yi Qiu, Qun Yuan · 2024 · Briefings in Bioinformatics
Alterations of Oral Microbiota in Young Children with Autism: Unraveling Potential Biomarkers for Early Detection.
Jacqueline Wai-yan Tang, Charles Cheuk-fung Hau, Wai-Man Tong, R. Watt, C. Yiu, Kathy Kar-man Shum · 2024 · E -journal of dentistry
Nitrate metabolism and periodontal health: The roles of nitric oxide in microbial killing and immunoregulation
Bob T. Rosier, George Hajishengallis, David A. Wink, Álex Mira · 2025 · Periodontology 2000
Isolation and Description of Catonella massiliensis sp. nov., a Novel Catonella Species, Isolated from a Stable Periodontitis Subject
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