The human oral microbiome database: a web accessible resource for investigating oral microbe taxonomic and genomic information

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Items 101–200 of 999

1. MiDAS 2.0: an ecosystem-specific taxonomy and online database for the organisms of wastewater treatment systems expanded for anaerobic digester groups
   Simon Jon McIlroy, Rasmus Hansen Kirkegaard, Bianca McIlroy, Marta Nierychlo, Jannie Munk Kristensen, Søren Michael Karst, Mads Albertsen, Per Halkjær Nielsen · 2017 · Database
2. Oral Commensal Streptococci: Gatekeepers of the Oral Cavity
   Joshua J Baty, Sara N. Stoner, Jessica A. Scoffield · 2022 · Journal of Bacteriology
3. Temporal Stability of the Salivary Microbiota in Oral Health
   Daniel Belstrøm, Palle Holmstrup, Allan Bardow, Alexis S. Kokaras, Nils‐Erik Fiehn, Bruce J. Paster · 2016 · PLoS ONE
4. Characterization of the salivary microbiome in people with obesity
   Yujia Wu, Xiaopei Chi, Qian Zhang, Feng Chen, Xuliang Deng · 2018 · PeerJ
5. Root Microbiota in Primary and Secondary Apical Periodontitis
   Serge Bouillaguet, Daniel Manoil, Myriam Girard, Justine Louis, Nadia Gaïa, Stefano Léo, Jacques Schrenzel, Vladimir Lazarević · 2018 · Frontiers in Microbiology
6. Rapid and accurate identification of ribosomal RNA sequences via deep learning
   Zhi-Luo Deng, Philipp C. Münch, René Mreches, Alice Carolyn McHardy · 2022 · Nucleic Acids Research
7. An in vitrobiofilm model system maintaining a highly reproducible species and metabolic diversity approaching that of the human oral microbiome
   Anna Edlund, Youngik Yang, Adam P. Hall, Lihong Guo, Renate Lux, Xuesong He, Karen E Nelson, Kenneth H. Nealson, Shibu Yooseph, Wenyuan Shi et al. · 2013 · Microbiome
8. The Same Microbiota and a Potentially Discriminant Metabolome in the Saliva of Omnivore, Ovo-Lacto-Vegetarian and Vegan Individuals
   De Filippis, Francesca, Vannini, Lucia, La Storia, Antonietta, Laghi, Luca, Piombino, Paola, Stellato, Giuseppina, Serrazanetti, Diana I., Gozzi, Giorgia, Turroni, Silvia, Ferrocino, Ilario et al. · 2014 · PLoS ONE
9. Tools for the Microbiome: Nano and Beyond
   Julie S. Biteen, Paul C. Blainey, Zoë G. Cardon, Miyoung Chun, George McDonald Church, Pieter C. Dorrestein, Scott E. Fraser, Jack A. Gilbert, Janet K Jansson, Rob D. Knight et al. · 2015 · ACS Nano
10. Acquisition and Adaptation of Ultra-small Parasitic Reduced Genome Bacteria to Mammalian Hosts
    Jeffrey S. McLean, Batbileg Bor, Kristopher A. Kerns, Quanhui Liu, Thao T. To, Lindsey Solden, Erik L. Hendrickson, Kelly C. Wrighton, Wenyuan Shi, Xuesong He · 2020 · Cell Reports
11. Probiotics as an adjunct therapy for the treatment of halitosis, dental caries and periodontitis
    Bustamante, Mariela, Oomah, B. Dave, Mosi-Roa, Yohanna, Rubilar, Mónica, Burgos-Díaz, César · 2020 · Probiotics and Antimicrobial Proteins
12. Levels of Candidate Periodontal Pathogens in Subgingival Biofilm
    Ricardo Reis Oliveira, Daiane Fermiano, Magda Feres, Lígia Figueiredo, Flavia Teles, Geisla Mary Silva Soares, Marcelo Faveri · 2016 · Journal of Dental Research
13. The healthy female microbiome across body sites: effect of hormonal contraceptives and the menstrual cycle
    Maria Christine Krog, Luisa Warchavchik Hugerth, Emma Fransson, Zahra Bashir, Anders Nyboe Andersen, Gabriella Edfeldt, Lars G. Engstrand, Ina Schuppe‐Koistinen, Henriette Svarre Nielsen · 2022 · Human Reproduction
14. Bacteria and bacterial DNA in atherosclerotic plaque and aneurysmal wall biopsies from patients with and without periodontitis
    Zahra Armingohar, Jorgen Joakim Jorgensen, Anne Karin Kristoffersen, Emnet Abesha-Belay, Ingar Olsen · 2014 · Journal of Oral Microbiology
15. Prospective study of oral microbiome and colorectal cancer risk in low-income and African American populations
    Yang, Yaohua, Cai, Qiuyin, Shu, Xiao‐Ou, Steinwandel, Mark D., Blot, William J., Zheng, Wei, Long, Jirong · 2019 · International Journal of Cancer
16. The Human Salivary Microbiome Is Shaped by Shared Environment Rather than Genetics: Evidence from a Large Family of Closely Related Individuals
    Liam P. Shaw, André Luís Ribeiro Ribeiro, Adam P. Levine, Nikolas Pontikos, François Balloux, Anthony Walter Segal, Adam Paul Roberts, Andrew Mark Smith · 2017 · mBio
17. Comparative metagenomics reveals taxonomically idiosyncratic yet functionally congruent communities in periodontitis
    Shareef M. Dabdoub, Sukirth M. Ganesan, Purnima Kumar · 2016 · Scientific Reports
18. Reference databases for taxonomic assignment in metagenomics
    Mónica Santamaría, Bruno Fosso, Arianna Consiglio, G. De Caro, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Marinella Marzano, Daniel Alonso-Alemany, Gabriel Valiente et al. · 2012 · Briefings in Bioinformatics
19. Subgingival microbiome in smokers and non‐smokers in Korean chronic periodontitis patients
    Ji-Hoi Moon, Jae‐Hyung Lee, J.‐Y. Lee · 2014 · Molecular Oral Microbiology
20. Generation of Comprehensive Ecosystem-Specific Reference Databases with Species-Level Resolution by High-Throughput Full-Length 16S rRNA Gene Sequencing and Automated Taxonomy Assignment (AutoTax)
    Morten Simonsen Dueholm, Kasper Skytte Andersen, Simon Jon McIlroy, Jannie Munk Kristensen, Erika Yashiro, Søren Michael Karst, Mads Albertsen, Per Halkjær Nielsen · 2020 · mBio
21. An accurate and efficient experimental approach for characterization of the complex oral microbiota
    Wei Zheng, Maria Tsompana, Angela Ruscitto, Ashu Sharma, Robert J. Genco, Yijun Sun, Michael Joseph Buck · 2015 · Microbiome
22. Differential preservation of endogenous human and microbial DNA in dental calculus and dentin
    Allison E. Mann, Susanna J. Sabin, Kirsten A. Ziesemer, Åshild J. Vågene‬, Hannes Schroeder, Andrew T. Ozga, Krithivasan Sankaranarayanan, Courtney A. Hofman, James A. Fellows Yates, Domingo C. Salazar‐García et al. · 2018 · Scientific Reports
23. The oral microbiome – friend or foe?
    Mogens Kilian · 2018 · European Journal Of Oral Sciences
24. Maturation of Oral Microbiota in Children with or without Dental Caries
    Pernilla Lif Holgerson, Carina Öhman, Agneta Rönnlund, Ingegerd Johansson · 2015 · PLoS ONE
25. Investigation of the Effect of Type 2 Diabetes Mellitus on Subgingival Plaque Microbiota by High-Throughput 16S rDNA Pyrosequencing
    Mi Zhou, Ruichen Rong, Daniel B. Munro, Chunxia Zhu, Xiang Gao, Qi Zhang, Qunfeng Dong · 2013 · PLoS ONE
26. Microbiota and Metatranscriptome Changes Accompanying the Onset of Gingivitis
    Emily M. Nowicki, Raghav Shroff, Jacqueline A. Singleton, Diane E. Renaud, Debra L. Wallace, Julie Drury, Jolene Zirnheld, Brock Colleti, Andrew D. Ellington, Richard John Lamont et al. · 2018 · mBio
27. LRLSHMDA: Laplacian Regularized Least Squares for Human Microbe–Disease Association prediction
    Fan Wang, Zhi-An Huang, Xing Chen, Zexuan Zhu, Zhenkun Wen, Jiyun Zhao, Guiying Yan · 2017 · Scientific Reports
28. Community profiling of the urinary microbiota: considerations for low-biomass samples
    Lisa Karstens, Mark J. Asquith, Vincent G. Caruso, James Todd Rosenbaum, Damien A. Fair, Jonathan G. Braun, William Thomas Gregory, Rahel Nardos, Shannon K. McWeeney · 2018 · Nature Reviews Urology
29. New Approaches for Isolation of Previously Uncultivated Oral Bacteria
    Maria V. Sizova, Tine Hohmann, Amanda Hazen, Bruce J. Paster, S. Halem, C. M. Murphy, Nicolai S. Panikov, Slava S. Epstein · 2011 · Applied and Environmental Microbiology
30. Robust species taxonomy assignment algorithm for 16S rRNA NGS reads: application to oral carcinoma samples
    Nezar Noor Al-Hebshi, Akram Thabet Nasher, Ali Mohamed Idris, Tsute Chen · 2015 · Journal of Oral Microbiology
31. Identification of Rothia Bacteria as Gluten-Degrading Natural Colonizers of the Upper Gastro-Intestinal Tract
    Maram Zamakhchari, Guoxian Wei, Floyd E. Dewhirst, Jaeseop Lee, Detlef Schuppan, Frank G. Oppenheim, Eva J. Helmerhorst · 2011 · PLoS ONE
32. Saliva and tooth biofilm bacterial microbiota in adolescents in a low caries community
    L. Eriksson, Pernilla Lif Holgerson, I. Johansson · 2017 · Scientific Reports
33. The subgingival microbiome associated with periodontitis in type 2 diabetes mellitus
    Baochen Shi, Renate Lux, Perry R. Klokkevold, Michaela Chang, Emma Barnard, Susan Kinder Haake, Huiying Li · 2019 · The ISME Journal
34. The Influence of Smoking on the Peri-Implant Microbiome
    Alexandra Tsigarida, Shareef M. Dabdoub, Haikady Navada Nagaraja, Purnima Kumar · 2015 · Journal of Dental Research
35. Probiotic features of Lactobacillus strains isolated from Ragusano and Pecorino Siciliano cheeses
    Cinzia Caggia, Maria De Angelis, Iole Pitino, Alessandra Pino, Cinzia Lucia Randazzo · 2015 · Food Microbiology
36. The Microbiome and Blood Pressure: Can Microbes Regulate Our Blood Pressure?
    Souhaila Al Khodor, Bernd Reichert, Ibrahim F. Shatat · 2017 · Frontiers in Pediatrics
37. PCR-based quantification of taxa-specific abundances in microbial communities: Quantifying and avoiding common pitfalls
    Fabian Bonk, Denny Popp, Hauke Harms, Florian Centler · 2018 · Journal of Microbiological Methods
38. Frequency of Tongue Cleaning Impacts the Human Tongue Microbiome Composition and Enterosalivary Circulation of Nitrate
    Gena DeVue Tribble, Nikola Angelov, Robin L. Weltman, Bingyan Wang, Sridhar V.K. Eswaran, Isabel C. Gay, Kavitha Parthasarathy, Doan-Hieu V. Dao, Katherine N. Richardson, Nadia M. Ismail et al. · 2019 · Frontiers in Cellular and Infection Microbiology
39. Acetaldehyde production by major oral microbes
    K Moritani, Toru Takeshita, Y. Shibata, Toshiharu Ninomiya, Yutaka Kiyohara, Yoshihisa Yamashita · 2015 · Oral Diseases
40. Critical review of 16S rRNA gene sequencing workflow in microbiome studies: From primer selection to advanced data analysis
    Alba Regueira‐Iglesias, Carlos Balsa‐Castro, Triana Blanco‐Pintos, Inmaculada Tomás · 2023 · Molecular Oral Microbiology
41. Oral biofilms: molecular analysis, challenges, and future prospects in dental diagnostics
    Philip David Marsh, До, Devine · 2013 · Clinical Cosmetic and Investigational Dentistry
42. A randomised clinical study to determine the effect of a toothpaste containing enzymes and proteins on plaque oral microbiome ecology
    Adams, S. E., Arnold, D., Murphy, B., Carroll, P., Green, A. K., Smith, A. M., Marsh, P. D., Chen, T., Marriott, R. E., Brading, M. G. · 2017 · Scientific Reports
43. Tongue microbiota and oral health status in community-dwelling elderly adults.
    Asakawa, Mikari, Takeshita, Toru, Furuta, Michiko, Kageyama, Shinya, Takeuchi, Kenji, Hata, Jun, Ninomiya, Toshiharu, Yamashita, Yoshihisa · 2018 · mSphere
44. Porphyromonas gingivalis is the most abundant species detected in coronary and femoral arteries
    J-L. C. Mougeot, C. B. Stevens, Bruce J. Paster, Michael Thomas Brennan, Peter B. Lockhart, F. K. B Mougeot · 2017 · Journal of Oral Microbiology
45. The impact of fixed orthodontic appliances and clear aligners on the oral microbiome and the association with clinical parameters: A longitudinal comparative study
    Bhumika Shokeen, Edward Viloria, Emily Duong, Masooma Rizvi, Guiselle Murillo, Joseph Mullen, Baochen Shi, Márcia Dinis, Huiying Li, Nini Chaichanasakul Tran et al. · 2022 · American Journal of Orthodontics and Dentofacial Orthopedics
46. Subgingival microbiota in individuals with severe chronic periodontitis
    Chi-Ying Tsai, Chuan Yi Tang, Te-Sheng Tan, Kuan-Hsueh Chen, Ki-Hok Liao, Ming‐Li Liou · 2016 · Journal of Microbiology Immunology and Infection
47. Insight into Oral Biofilm: Primary, Secondary and Residual Caries and Phyto-Challenged Solutions
    Smitha Chenicheri, Usha R, Rajesh Ramachandran, Vinoy Thomas, Andrew T. Wood · 2017 · The Open Dentistry Journal
48. Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets
    Isabel F. Escapa, Yanmei Huang, Tsute Chen, Maoxuan Lin, Alexis S. Kokaras, Floyd E. Dewhirst, Katherine P. Lemon · 2020 · Microbiome
49. Integrated metagenomic data analysis demonstrates that a loss of diversity in oral microbiota is associated with periodontitis
    Dongmei Ai, Ruocheng Huang, Jin Wen, Chao Li, Zhu Jiangping, Li Charlie Xia · 2017 · BMC Genomics
50. Live and let die: Hydrogen peroxide production by the commensal flora and its role in maintaining a symbiotic microbiome
    Sylvio Redanz, Xingqun Cheng, Rodrigo A. Giacaman, Carmem S. Pfeifer, Justin L. Merritt, Jens Kreth · 2018 · Molecular Oral Microbiology
51. The Biofilm Community: Rebels with a Cause
    Wilson Aruni, Yuetan Dou, Arunima Mishra, Hansel M. Fletcher · 2015 · Current Oral Health Reports
52. The Human Gastric Microbiome Is Predicated upon Infection with Helicobacter pylori
    Ingeborg Klymiuk, Ceren Bilgilier, Alexander Stadlmann, Jakob Thannesberger, Marie-Theres Kastner, Christoph Högenauer, Andreas Püspök, Susanne Biowski-Frotz, Christiane Schrutka-Kölbl, Gerhard Thallinger et al. · 2017 · Frontiers in Microbiology
53. Relative reduction of biological and phylogenetic diversity of the oral microbiota of diabetes and pre-diabetes patients.
    Saeb, Amr T.M., Al-Rubeaan, Khalid A., Aldosary, Khalid, Udaya Raja, G.K., Mani, Balavenkatesh, Abouelhoda, Mohamed, Tayeb, Hamsa T. · 2019 · Microbial Pathogenesis
54. Sequencing of 16S rRNA reveals a distinct salivary microbiome signature in Behçet's disease
    Patrick Coit, Gonca Mumcu, Filiz Türe Özdemir, Ali Ugur Unal, Uğur Alpar, Nagihan Bostancı, Tülin Ergun, Haner Di̇reskeneli̇, Amr H. Sawalha · 2016 · Clinical Immunology
55. Characteristics of Probiotic Preparations and Their Applications
    Guangqiang Wang, Yunhui Chen, Yongjun Xia, Xin Song, Lianzhong Ai · 2022 · Foods
56. Intermicrobial Interactions as a Driver for Community Composition and Stratification of Oral Biofilms
    Jakubovics, Nicholas S. · 2015 · Journal of Molecular Biology
57. The respiratory microbiome and susceptibility to influenza virus infection
    Kyu Han Lee, Aubree L. Gordon, Kerby Shedden, Guillermina M. Kuan, Sophia Ng, Ángel Balmaseda, Betsy Foxman · 2019 · PLoS ONE
58. Identification of the Bacterial Biosynthetic Gene Clusters of the Oral Microbiome Illuminates the Unexplored Social Language of Bacteria during Health and Disease
    Aleti, Gajender, Baker, Jonathon L., Tang, Xiaoyu, Alvarez, Ruth, Dinis, Márcia, Tran, Nini C., Melnik, Alexey V., Zhong, Cuncong, Ernst, Madeleine, Dorrestein, Pieter C. et al. · 2019 · mBio
59. Optimizing the quality of clinical studies on oral microbiome: A practical guide for planning, performing, and reporting
    Egija Zaura, Vincent Y. Pappalardo, Mark J. Buijs, C.M.C. Volgenant, Bernd Willem Brandt · 2020 · Periodontology 2000
60. High Diversity of the Saliva Microbiome in Batwa Pygmies
    Ivan Nasidze, Jing Li, Roland Schröeder, Jean L. Creasey, Mingkun Li, Mark Stoneking · 2011 · PLoS ONE
61. Oral Microbiome Alterations Associated with Early Childhood Caries Highlight the Importance of Carbohydrate Metabolic Activities
    Wang, Yuan, Wang, Sa, Wu, Chunyan, Chen, Xi, Duan, Zhuhui, Xu, Qian, Jiang, Wen, Xu, Lei, Wang, Tingting, Su, Lingkai et al. · 2019 · mSystems
62. Metagenomic sequencing of bile from gallstone patients to identify different microbial community patterns and novel biliary bacteria
    Hongzhang Shen, Fuqiang Ye, Lu Xie, Jianfeng Yang, Zhen Li, Peisong Xu, Fei Meng, Lei Li, Ying Chen, Xiaochen Bo et al. · 2015 · Scientific Reports
63. Keystone Species in Pregnancy Gingivitis: A Snapshot of Oral Microbiome During Pregnancy and Postpartum Period
    Preethi Balan, Yap Seng Chong, Shivshankar Umashankar, Sanjay Swarup, Wong Mun Loke, Violeta López, Hong Gu He, Chaminda Jayampath Seneviratne · 2018 · Frontiers in Microbiology
64. The Oral Microbiome in Periodontal Health
    Magdalena Lenartova, Barbora Tesinska, Tatjana Janatova, Ondrej Hrebicek, Jaroslav Myšák, Jiřı́ Janata, Lucie Najmanová · 2021 · Frontiers in Cellular and Infection Microbiology
65. The human oral metaproteome reveals potential biomarkers for caries disease
    Pedro Belda‐Ferre, James C. Williamson, Áurea Simón‐Soro, Alejandro Artacho, Ole Nørregaard Jensen, Álex Mira · 2015 · PROTEOMICS
66. In Vitro Cultivation of ‘Unculturable’ Oral Bacteria, Facilitated by Community Culture and Media Supplementation with Siderophores
    Sonia R. Vartoukian, Aleksandra Adamowska, Megan Lawlor, Rebecca Moazzez, Floyd E. Dewhirst, William G. Wade · 2016 · PLoS ONE
67. Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community
    Christopher L. Hemme, Stefan J. Green, Lavanya Rishishwar, Om Prakash, Angelica Pettenato, Romy Chakraborty, Adam M. Deutschbauer, Joy D. Van Nostrand, Liyou Wu, Zhili He et al. · 2016 · mBio
68. Intra‐oral single‐site comparisons of periodontal and peri‐implant microbiota in health and disease
    Xiaolin Yu, Yuki Chan, Long‐Fei Zhuang, Hongchang Lai, Niklaus Peter Lang, Wai Keung Leung, Rory Munro Watt · 2019 · Clinical Oral Implants Research
69. Variations in the oral microbiome are associated with depression in young adults
    Benjamin Wingfield, Coral R. Lapsley, Andrew McDowell, Georgios Miliotis, Margaret McLafferty, Siobhan M. O’Neill, Sonya Coleman, T.M. McGinnity, Anthony J. Bjourson, Elaine K. Murray · 2021 · Scientific Reports
70. Association Between the Respiratory Microbiome and Susceptibility to Influenza Virus Infection
    Tim K. Tsang, Kyu Han Lee, Betsy Foxman, Ángel Balmaseda, Lionel Gresh, Nery Sánchez, Sergio Ojeda, Roger López, Yang Yang, Guillermina Kuan et al. · 2019 · Clinical Infectious Diseases
71. Comparison of the Oral Microbiomes of Canines and Their Owners Using Next-Generation Sequencing
    Changin Oh, Kunkyu Lee, Yeotaek Cheong, Sang‐Won Lee, Seung‐Yong Park, Chang‐Seon Song, In‐Soo Choi, Joong‐Bok Lee · 2015 · PLoS ONE
72. Influence of periodontal treatment on subgingival and salivary microbiotas
    Daniel Belstrøm, Maria Anastasia Grande, Maria Lynn Sembler‐Møller, Nikolai Soren Kirkby, Sean L. Cotton, Bruce J. Paster, Palle Holmstrup · 2018 · Journal of Periodontology
73. Dynamics of the oral microbiota as a tool to estimate time since death
    Joe Adserias‐Garriga, Narciso Martín Quijada, Marta Hernández, David Rodrı́guez-Làzaro, Dawnie Wolfe Steadman, Librado Jesús Garcia-Gil · 2017 · Molecular Oral Microbiology
74. The implication of probiotics in the prevention of dental caries
    Tzu‐Hsing Lin, Chih‐Hui Lin, Tzu‐Ming Pan · 2017 · Applied Microbiology and Biotechnology
75. Obesity alters composition and diversity of the oral microbiota in patients with type 2 diabetes mellitus independently of glycemic control
    Jonathan Tam, Thomas Karl Hoffmann, Sabine Fischer, Stefan Richard Bornstein, Jürgen Gräßler, Barbara Noack · 2018 · PLoS ONE
76. Comparison of DNA Extraction Methods in Analysis of Salivary Bacterial Communities
    Vladimir Lazarević, Nadia Gaïa, Myriam Girard, Patrice François, Jacques Schrenzel · 2013 · PLoS ONE
77. Quantitative metaproteomics of medieval dental calculus reveals individual oral health status
    Rosa Jersie-Christensen, Liam Thomas Lanigan, David B. Lyon, Meaghan Mackie, Daniel Belstrøm, Christian D. Kelstrup, Anna K. Fotakis, Eske Willerslev, Niels Lynnerup, Lars Juhl Jensen et al. · 2018 · Nature Communications
78. The severity of human peri‐implantitis lesions correlates with the level of submucosal microbial dysbiosis
    Annika Kröger, Claudia Hülsmann, Stefan Fickl, Thomas Spinell, Fabian Hüttig, Kauffmann Frederic, André Heimbach, Per Hoffmann, Norbert Enkling, Stefan Renvert et al. · 2018 · Journal Of Clinical Periodontology
79. Comprehensive Analysis of Secondary Dental Root Canal Infections: A Combination of Culture and Culture-Independent Approaches Reveals New Insights
    Annette Carola Anderson, Elmar Hellwig, Robin Vespermann, Annette Wittmer, Michael Schmid, Lamprini Karygianni, Ali Al‐Ahmad · 2012 · PLoS ONE
80. The Porphyromonas gingivalis/Host Interactome Shows Enrichment in GWASdb Genes Related to Alzheimer's Disease, Diabetes and Cardiovascular Diseases
    Christopher J. Carter, James France, StJohn Crean, Sim K. Singhrao · 2017 · Frontiers in Aging Neuroscience
81. Cariogenic microbiome and microbiota of the early primary dentition: A contemporary overview
    Kausar Sadia Fakhruddin, Hien Chi Ngo, Lakshman Perera Samaranayake · 2018 · Oral Diseases
82. Composition Analysis and Feature Selection of the Oral Microbiota Associated with Periodontal Disease
    Wen-Pei Chen, Shih‐Hao Chang, Chuan Yi Tang, Ming‐Li Liou, Suh‐Jen Jane Tsai, Yaw-Ling Lin · 2018 · BioMed Research International
83. Explainable AI reveals changes in skin microbiome composition linked to phenotypic differences
    Anna Paola Carrieri, Niina Haiminen, Sean Maudsley-Barton, Laura‐Jayne Gardiner, Barry Murphy, Andrew E. Mayes, Sarah Paterson, Sally G. Grimshaw, Martyn Winn, Cameron Shand et al. · 2021 · Scientific Reports
84. Salivary bacterial fingerprints of established oral disease revealed by the Human Oral Microbe Identification using Next Generation Sequencing (HOMI NGS ) technique
    Daniel Belstrøm, Bruce J. Paster, Nils‐Erik Fiehn, Allan Bardow, Palle Holmstrup · 2016 · Journal of Oral Microbiology
85. Relationship between periodontitis‐associated subgingival microbiota and clinical inflammation by 16S pyrosequencing
    Anny J. Camelo-Castillo, Lourdes Nóvoa, Carlos Balsa‐Castro, Juan Blanco, Álex Mira, Inmaculada Tomás · 2015 · Journal Of Clinical Periodontology
86. Deep metaproteomic analysis of human salivary supernatant
    Pratik Dilip Jagtap, Thomas F. McGowan, Sricharan Bandhakavi, Zheng Jin Tu, Sean L. Seymour, Timothy J. Griffin, Joel D. Rudney · 2012 · PROTEOMICS
87. The Denture-Associated Oral Microbiome in Health and Stomatitis
    Baochen Shi, Tingxi Wu, Jeffrey S. McLean, Anna Edlund, Youngik Young, Xuesong He, Hongyang Lv, Xuedong Zhou, Wenyuan Shi, Huiying Li et al. · 2016 · mSphere
88. Identification and characterization of a novel Fusobacterium nucleatum adhesin involved in physical interaction and biofilm formation with Streptococcus gordonii
    Bruno P. Lima, Wenyuan Shi, Renate Lux · 2017 · MicrobiologyOpen
89. TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution
    Robin R. Rohwer, Joshua J. Hamilton, Ryan J. Newton, Katherine D. McMahon · 2018 · mSphere
90. Characteristics of the Salivary Microbiota in Patients With Various Digestive Tract Cancers
    Shinya Kageyama, Toru Takeshita, Kenji Takeuchi, Mikari Asakawa, Rie Matsumi, Michiko Furuta, Yukie Shibata, Kiyoshi Nagai, Masahiko Ikebe, Masaru Morita et al. · 2019 · Frontiers in Microbiology
91. The mycobiome of root canal infections is correlated to the bacteriome
    Ilona Francisca Persoon, Mark J. Buijs, A. R. Özok, Wim Crielaard A, Bastiaan Philip Krom, Egija Zaura, Bernd Willem Brandt · 2016 · Clinical Oral Investigations
92. Alteration of salivary microbiome in periodontitis with or without type-2 diabetes mellitus and metformin treatment
    Xiaoyu Sun, Meihui Li, Li Xia, Zhaohui Fang, Shenjun Yu, Jike Gao, Qiang Feng, Pishan Yang · 2020 · Scientific Reports
93. The Oral Microbiome and Oral Cancer
    Laura Wang, Ian Ganly · 2014 · Clinics in Laboratory Medicine
94. Oral mucosa-on-a-chip to assess layer-specific responses to bacteria and dental materials
    Christopher Rahimi, Benjamin Rahimi, Dominic Padova, Seyed Ali Rooholghodos, Diane R. Bienek, Xiaolong Luo, Gili Kaufman, Christopher B. Raub · 2018 · Biomicrofluidics
95. The salivary proteome: Challenges and perspectives
    Walter L. Siqueira, Colin Dawes · 2011 · PROTEOMICS - CLINICAL APPLICATIONS
96. Relative abundance of total subgingival plaque-specific bacteria in salivary microbiota reflects the overall periodontal condition in patients with periodontitis
    Shinya Kageyama, Toru Takeshita, Mikari Asakawa, Yukie Shibata, Kenji Takeuchi, Wataru Yamanaka, Yoshihisa Yamashita · 2017 · PLoS ONE
97. Impact of systemic factors in shaping the periodontal microbiome
    Flavia Teles, Yu Wang, George Hajishengallis, Hatice Hastürk, Julie T. Marchesan · 2020 · Periodontology 2000
98. Salivary inflammatory markers and microbiome in normoglycemic lean and obese children compared to obese children with type 2 diabetes
    Waleed F. Janem, Frank Andrew Scannapieco, Amarpeet Sabharwal, Maria Tsompana, Harvey Alan Berman, Elaine M. Haase, Jeffrey C. Miecznikowski, Lucy D. Mastrandrea · 2017 · PLoS ONE
99. Salivary microbiome profiles of oral cancer patients analyzed before and after treatment
    Anna I. Mäkinen, Vincent Y. Pappalardo, Mark J. Buijs, Bernd Willem Brandt, Antti A. Mäkitie, Jukka H. Meurman, Egija Zaura · 2023 · Microbiome
100. Discrimination of the oral microbiota associated with high hydrogen sulfide and methyl mercaptan production
     Toru Takeshita, Nao Suzuki, Yoshio Nakano, Masaki Yasui, Masahiro Yoneda, Yoshihiro Shimazaki, Takao Hirofuji, Yoshihisa Yamashita · 2012 · Scientific Reports