NPH3- and PGP-like genes are exclusively expressed in the apical tip region essential for blue-light perception and lateral auxin transport in maize coleoptiles
Open accessAbstract
Phototropic curvature results from differential growth on two sides of the elongating shoot, which is explained by asymmetrical indole-3-acetic acid (IAA) distribution. Using 2 cm maize coleoptile segments, 1st positive phototropic curvature was confirmed here after 8 s irradiation with unilateral blue light (0.33 μmol m(-2) s(-1)). IAA was redistributed asymmetrically by approximately 20 min after photo-stimulation. This asymmetric distribution was initiated in the top 0-3 mm region and was then transmitted to lower regions. Application of the IAA transport inhibitor, 1-N-naphthylphthalamic acid (NPA), to the top 2 mm region completely inhibited phototropic curvature, even when auxin was simultaneously applied below the NPA-treated zone. Thus, lateral IAA movement occurred only within the top 0-3 mm region after photo-stimulation. Localized irradiation experiments indicated that the photo-stimulus was perceived in the apical 2 mm region. The results suggest that this region harbours key components responsible for photo-sensing and lateral IAA transport. In the present study, it was found that the NPH3- and PGP-like genes were exclusively expressed in the 0-2 mm region of the tip, whereas PHOT1 and ZmPIN1a, b, and c were expressed relatively evenly along the coleoptile, and ZmAUX1, ZMK1, and ZmSAURE2 were strongly expressed in the elongation zone. These results suggest that the NPH3-like and PGP-like gene products have a key role in photo-signal transduction and regulation of the direction of auxin transport after blue light perception by phot1 at the very tip region of maize coleoptiles.
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In maize, the NPH3 and PGP genes are specifically expressed at the tip of the maize coleoptile, similar to the expression pattern observed in Arabidopsis.
“Additionally, in maize, the NPH3 and PGP genes are specifically expressed at the tip of the maize coleoptile, similar to the expression pattern observed in Arabidopsis (Matsuda et al., 2011).”
From The action of enhancing weak light capture via phototropic growth and chloroplast movement in plants (2022) · cites this paper as Matsuda et al., 2011
The Results (‘Expression of genes related to phototropism in maize coleoptiles’; page unavailable) report that NPH3-like and PGP-like genes are specifically expressed in the maize coleoptile’s 0–1 mm or 0–2 mm tip region. The paper discusses related Arabidopsis proteins, but does not establish a similar tip-specific expression pattern in Arabidopsis; its Introduction says the precise sites of photo-sensing and lateral auxin redistribution in dicots were still unknown. (LLM, conf=0.90)
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Cites
Auxin: Regulation, Action, and Interaction
Woodward, A. W. (2005) · Annals of Botany · doi:10.1093/aob/mci083 · Cited by 2,338 · cited 1× · see citing works
“Since then, IAA has been shown to be involved in many physiological events (Woodward and Bartel, 2005).”
The 'Power of movement in plants.'--1880.
Darwin, C. R., & Darwin, F. (1880) · Cambridge University Press eBooks · doi:10.1017/cbo9780511693670 · Cited by 1,544 · see citing works
Loss of an MDR Transporter in Compact Stalks of Maize br2 and Sorghum dw3 Mutants
Multani, D. S., Briggs, S. P., Chamberlin, M. A., Blakeslee, J. J., Murphy, A. S., & Johal, G. S. (2003) · Science · doi:10.1126/science.1086072 · Cited by 580 · cited 1× · see citing works
“At present, there is little information about maize NPH3 and MDR/PGP genes, although it is known that the MDR/PGP gene encoding ABCB1/BR2 has a role in shoot growth, as revealed from analyses of the maize dwarf mutant br2 (Multani et al., 2003; Knöller et al., 2010).”
LAZY1 controls rice shoot gravitropism through regulating polar auxin transport
Li, P., Wang, Y., Qian, Q., Fu, Z., Wang, M., Zeng, D., Li, B., Wang, X., & Li, J. (2007) · Cell Research · doi:10.1038/cr.2007.38 · Cited by 414 · cited 1× · see citing works
“These results indicate that other PIN protein(s) or PGP-like transporter(s) are involved in lateral IAA movements, as proposed for Arabidopsis (Noh et al., 2003; Li et al., 2007; Nagashima et al., 2008).”
Cellular and Subcellular Localization of Phototropin 1
Sakamoto, K., & Briggs, W. R. (2002) · The Plant Cell · doi:10.1105/tpc.003293 · Cited by 405 · see citing works
<i>Arabidopsis</i> NPH3: A NPH1 Photoreceptor-Interacting Protein Essential for Phototropism
Motchoulski, A., & Liscum, E. (1999) · Science · doi:10.1126/science.286.5441.961 · Cited by 320 · cited 1× · see citing works
“In addition, direct binding of AtNPH3 and its homologue AtRPT2 to the phot1 protein was also reported (Motchoulski and Liscum, 1999; Sakamoto and Briggs, 2002; Inada et al., 2004).”
Philippar, K., Fuchs, I., Lüthen, H., et al. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.21.12186 · Cited by 305 · see citing works
Polar auxin transport — old questions and new concepts?
Friml, J., & Palme, K. J. (2002) · Springer eBooks · doi:10.1007/978-94-010-0377-3_2 · Cited by 301 · see citing works
Polar auxin transport – old questions and new concepts?
Friml, J., & Palme, K. J. (2002) · Plant Molecular Biology · doi:10.1023/a:1015248926412 · Cited by 289 · cited 2× · see citing works
“Among these proteins, AtPIN3 is known to have a role in IAA redistribution in the tropic response of Arabidopsis hypocotyls (Friml and Palme, 2002).”
Enhanced gravi- and phototropism in plant mdr mutants mislocalizing the auxin efflux protein PIN1
Noh, B., Bandyopadhyay, A., Peer, W. A., Spalding, E. P., & Murphy, A. S. (2003) · Nature · doi:10.1038/nature01716 · Cited by 273 · cited 2× · see citing works
“These results indicate that other PIN protein(s) or PGP-like transporter(s) are involved in lateral IAA movements, as proposed for Arabidopsis (Noh et al., 2003; Li et al., 2007; Nagashima et al., 2008).”
The Relationship between Auxin Transport and Maize Branching
Gallavotti, A., Yang, Y., Schmidt, R. J., & Jackson, D. (2008) · Plant Physiology · doi:10.1104/pp.108.121541 · Cited by 227 · cited 1× · see citing works
“In the monocot maize, ZmPIN1a, b, and c are involved in auxin transport during embryogenesis and vegetative development (Carraro et al., 2006; Gallavotti et al., 2008; Forestan et al., 2010).”
Inada, S., Ohgishi, M., Mayama, T., Okada, K., & Sakai, T. (2004) · The Plant Cell · doi:10.1105/tpc.019901 · Cited by 215 · cited 2× · see citing works
“In addition, direct binding of AtNPH3 and its homologue AtRPT2 to the phot1 protein was also reported (Motchoulski and Liscum, 1999; Sakamoto and Briggs, 2002; Inada et al., 2004).”
Forestan, C., Meda, S., & Varotto, S. (2009) · PLANT PHYSIOLOGY · doi:10.1104/pp.109.150193 · Cited by 177 · cited 1× · see citing works
“In the monocot maize, ZmPIN1a, b, and c are involved in auxin transport during embryogenesis and vegetative development (Carraro et al., 2006; Gallavotti et al., 2008; Forestan et al., 2010).”
Carraro, N., Forestan, C., Canova, S., Traas, J. A., & Varotto, S. (2006) · PLANT PHYSIOLOGY · doi:10.1104/pp.106.080119 · Cited by 155 · cited 1× · see citing works
“In the monocot maize, ZmPIN1a, b, and c are involved in auxin transport during embryogenesis and vegetative development (Carraro et al., 2006; Gallavotti et al., 2008; Forestan et al., 2010).”
NPY1, a BTB-NPH3-like protein, plays a critical role in auxin-regulated organogenesis in Arabidopsis
Cheng, Y., Qin, G., Dai, X., & Zhao, Y. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0708506104 · Cited by 141 · cited 2× · see citing works
“In addition, it was shown that AtENP/MAB4/NPY1, a NPH3-like protein, functions as a signal transducer during organogenesis and regulates auxin distribution by modifying cellular PIN localization (Cheng et al., 2007; Furutani et al., 2007).”
Relocalization of the PIN1 Auxin Efflux Facilitator Plays a Role in Phototropic Responses
Blakeslee, J. J., Bandyopadhyay, A., Peer, W. A., Makam, S. N., & Murphy, A. S. (2004) · PLANT PHYSIOLOGY · doi:10.1104/pp.103.031690 · Cited by 137 · cited 1× · see citing works
“Therefore, it is likely that AtNPH3s act downstream of phot1 and regulates the direction of IAA transport by modifying PIN or related protein(s), including MDR1/PGP19 (Blakeslee et al., 2004).”
Haga, K., Takano, M., Neumann, R., & Iino, M. (2004) · The Plant Cell · doi:10.1105/tpc.104.028357 · Cited by 120 · cited 2× · see citing works
“CPT1 may act upstream of auxin redistribution induced by unilateral illumination (Haga et al., 2005).”
Brachytic2/ZmABCB1 functions in IAA export from intercalary meristems
Knöller, A. S., Blakeslee, J. J., Richards, E. L., Peer, W. A., & Murphy, A. S. (2010) · Journal of Experimental Botany · doi:10.1093/jxb/erq180 · Cited by 116 · cited 1× · see citing works
“At present, there is little information about maize NPH3 and MDR/PGP genes, although it is known that the MDR/PGP gene encoding ABCB1/BR2 has a role in shoot growth, as revealed from analyses of the maize dwarf mutant br2 (Multani et al., 2003; Knöller et al., 2010).”
Furutani, M., Kajiwara, T., KATO, T., Treml, B. S., Stockum, C., Torres‐Ruiz, R. A., & Tasaka, M. (2007) · Development · doi:10.1242/dev.009654 · Cited by 107 · cited 2× · see citing works
“In addition, it was shown that AtENP/MAB4/NPY1, a NPH3-like protein, functions as a signal transducer during organogenesis and regulates auxin distribution by modifying cellular PIN localization (Cheng et al., 2007; Furutani et al., 2007).”
Phototropic Dosage-Response Curves for Oat Coleoptiles
Zimmerman, B. K., & Briggs, W. R. (1963) · PLANT PHYSIOLOGY · doi:10.1104/pp.38.3.248 · Cited by 104 · see citing works
Phototropic Auxin Redistribution in Corn Coleoptiles
Briggs, W. R., Tocher, R. D., & Wilson, J. F. (1957) · Science · doi:10.1126/science.126.3266.210 · Cited by 100 · cited 2× · see citing works
“The generally accepted model of phototropism is that the tip region detects the direction of the photo-stimulus, and lateral IAA transport at the tip establishes the asymmetric IAA distribution that moves basipetally, causing the lower region to bend (Briggs et al., 1957; Iino, 1991, 1995; Fuchs et al., 2003).”
Understanding phototropism: from Darwin to today
Holland, J. J., Roberts, D., & Emmanuel Liscum, A. (2009) · Journal of Experimental Botany · doi:10.1093/jxb/erp113 · Cited by 96 · cited 2× · see citing works
“Photos were taken at various times points in each experiment. dcba Vascular system A Thinner side (where leaves emerge) Supplemental Figure 2.”
Nagashima, A., Uehara, Y., & Sakai, T. (2008) · Plant and Cell Physiology · doi:10.1093/pcp/pcn092 · Cited by 81 · see citing works
Pickard, B. G., & Thimann, K. V. (1964) · PLANT PHYSIOLOGY · doi:10.1104/pp.39.3.341 · Cited by 80 · see citing works
Light Dosage and Phototropic Responses of Corn and Oat Coleoptiles
Briggs, W. R. (1960) · PLANT PHYSIOLOGY · doi:10.1104/pp.35.6.951 · Cited by 78 · see citing works
Iino, M. (1982) · Planta · doi:10.1007/bf00393439 · Cited by 71 · cited 1× · see citing works
“In monocot coleoptiles, particularly, IAA is known to be synthesized from Trp at the tip region, and then transported to lower parts (Iino, 1982; Weiler and Wischnewski, 1984; Koshiba et al., 1995; Nishimura et al., 2009).”
Iino, M. (1991) · Plant Cell & Environment · doi:10.1111/j.1365-3040.1991.tb01502.x · Cited by 66 · cited 2× · see citing works
“These results are consistent with previous studies, in which the movement of exogenously applied radiolabelled IAA was determined (Pickard and Thimann, 1964; Iino, 1991).”
Blue light regulates an auxin-induced K <sup>+</sup> -channel gene in the maize coleoptile
Fuchs, I., Philippar, K., Ljung, K., Sandberg, G., & Hedrich, R. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2032704100 · Cited by 62 · cited 4× · see citing works
“The generally accepted model of phototropism is that the tip region detects the direction of the photo-stimulus, and lateral IAA transport at the tip establishes the asymmetric IAA distribution that moves basipetally, causing the lower region to bend (Briggs et al., 1957; Iino, 1991, 1995; Fuchs et al., 2003).”
InfluentialKinetic modelling of phototropism in maize coleoptiles
Iino, M. (1987) · Planta · doi:10.1007/bf00395074 · Cited by 54 · cited 2× · see citing works
“1A, the responses were characteristic of the phototropic responses reported previously for maize seedlings (Iino, 1987).”
Nishimura, T., Nakano, H., Hayashi, K., Niwa, C., & Koshiba, T. (2009) · Plant and Cell Physiology · doi:10.1093/pcp/pcp129 · Cited by 53 · cited 10× · see citing works
“It was shown previously that IAA is synthesized from Trp at the very tip region of maize coleoptiles, and the synthesized IAA moves to basal parts via polar transport regulated by ZmPIN1 proteins (Nishimura et al., 2009).”
InfluentialSelf-citationTissue-specific and subcellular localization of phototropin determined by immuno-blotting
Salomon, M., R�diger, W., & Knieb, E. (2004) · Planta · doi:10.1007/s00425-003-1164-7 · Cited by 52 · cited 2× · see citing works
“However, these investigations were carried out using 5 mm coleoptile sections (Palmer et al., 1993; Hager, 1996; Knieb et al., 2004).”
Gravitropism: Lateral Thinking in Auxin Transport
Moore, I. R. (2002) · Current Biology · doi:10.1016/s0960-9822(02)00943-0 · Cited by 49 · cited 1× · see citing works
“In Arabidopsis, it is postulated that AUX1, PIN2, and PIN3 are involved in relocating IAA in response to tropic stimuli (Friml and Palme, 2002; Moore, 2002).”
Auxin Redistribution during First Positive Phototropism in Corn Coleoptiles
Nick, P. A., Schäfer, E., & Furuya, M. (1992) · PLANT PHYSIOLOGY · doi:10.1104/pp.99.4.1302 · Cited by 45 · see citing works
Iino, M. (1995) · Plant and Cell Physiology · doi:10.1093/oxfordjournals.pcp.a078768 · Cited by 45 · cited 1× · see citing works
“The photo-sensing region for 1st pulse-induced positive phototropism was investigated by decapitating maize coleoptiles at various positions (up to 2 mm from the top) immediately after blue light stimulation and applying IAA to cut surfaces (Iino, 1995).”
Correlation of Blue Light-Induced Phosphorylation to Phototropism in Zea mays L
Palmer, J. M., Short, T. W., & Briggs, W. R. (1993) · PLANT PHYSIOLOGY · doi:10.1104/pp.102.4.1219 · Cited by 42 · see citing works
Interaction of gravi- and phototropic stimulation in the response of maize (Zea mays L.) coleoptiles
Nick, P. A., & Sch�fer, E. (1988) · Planta · doi:10.1007/bf00403013 · Cited by 42 · cited 2× · see citing works
“This pattern of movement appeared to show effects of gravity, because the phototropic stimulus makes the segments bend away from the vertical axis (Nick and Schäfer, 1988).”
Biosynthesis of Indole-3-Acetic Acid from L-Tryptophan in Coleoptile Tips of Maize (Zea mays L.)
Koshiba, T., Kamiya, Y., & Iino, M. (1995) · Plant and Cell Physiology · doi:10.1093/oxfordjournals.pcp.a078914 · Cited by 40 · cited 2× · see citing works
“Moreover, coleoptile tips are known to be the site of IAA production (Iino and Carr, 1982; Koshiba et al., 1995; Bennett et al., 2000; Mori et al., 2005; Nishimura et al., 2009).”
Self-citationMori, Y., Nishimura, T., & Koshiba, T. (2004) · Plant Science · doi:10.1016/j.plantsci.2004.09.010 · Cited by 38 · see citing works
Self-citationPhytochrome is required for the occurrence of time‐dependent phototropism in maize coleoptiles
Liu, Y., & Iino, M. (1996) · Plant Cell & Environment · doi:10.1111/j.1365-3040.1996.tb00016.x · Cited by 38 · cited 2× · see citing works
“Phototropic curvature in the maize coleoptile 2 cm segment system In many previous studies on monocot coleoptiles, phototropic curvature in response to various light conditions, including unilateral blue light irradiation, has been studied in ‘whole seedlings’ grown in darkness and/or under red light (Briggs, 1960; Zi…”
Iino, M., & Carr, D. J. (1982) · PLANT PHYSIOLOGY · doi:10.1104/pp.69.4.950 · Cited by 37 · see citing works
Togo, S., & Hasegawa, K. (1991) · Physiologia Plantarum · doi:10.1111/j.1399-3054.1991.tb05099.x · Cited by 25 · cited 1× · see citing works
“There is evidence that some growth inhibitor(s) increased in the light-irradiated half of oat coleoptiles (Hasegawa and Sakoda, 1988; Togo and Hasegawa, 1991).”
Hasegawa, K., & Sakoda, M. (1988) · Plant and Cell Physiology · doi:10.1093/oxfordjournals.pcp.a077617 · Cited by 22 · see citing works
Hager, A. (1996) · Planta · doi:10.1007/bf00206256 · Cited by 12 · cited 1× · see citing works
“However, these investigations were carried out using 5 mm coleoptile sections (Palmer et al., 1993; Hager, 1996; Knieb et al., 2004).”
Weiler, E. W., & Wischnewski, S. (1984) · Planta · doi:10.1007/bf00397417 · Cited by 10 · see citing works
Moving on up: auxin-induced K+ channel expression regulates gravitropism
Bennett, M. J., Roberts, J. A., & Palme, K. J. (2000) · Trends in Plant Science · doi:10.1016/s1360-1385(00)01557-0 · Cited by 10 · see citing works
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- Went, 1937, Phytohormones
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Sorted by citations
Yucasin is a potent inhibitor of YUCCA , a key enzyme in auxin biosynthesis
Nishimura, T., Hayashi, K., Suzuki, H., Gyohda, A., Takaoka, C., Sakaguchi, Y., Matsumoto, S., Kasahara, H., Sakai, T., Kato, J., et al. (2013) · The Plant Journal · doi:10.1111/tpj.12399 · Cited by 210 · see citing works
“Decapitation of maize coleoptile is known to make coleoptiles incapable of responding to gravity and light stimuli (Nishimura et al., 2009; Matsuda et al., 2011).”
BackgroundSelf-citationShoot phototropism in higher plants: New light through old concepts
Christie, J. M., & Murphy, A. S. (2013) · American Journal of Botany · doi:10.3732/ajb.1200340 · Cited by 152 · see citing works
“NPH3 is expressed predominantly at the coleoptile tip ( Matsuda et al., 2011 ) and has been shown to interact with phot1 both in vitro ( Motchoulski and Liscum, 1999 ) and in vivo ( Lariguet et al., 2006 ).”
BackgroundRegulation of polar auxin transport by protein and lipid kinases
Armengot, L., Marquès‐Bueno, M. M., & Jaillais, Y. (2016) · Journal of Experimental Botany · doi:10.1093/jxb/erw216 · Cited by 135 · see citing works
“This concept has been proven true to date for coleoptiles of monocotyledonous plants (Holland et al., 2009; Matsuda et al., 2011; Whippo and Hangarter, 2009).”
BackgroundWan, Y., Jásik, J., Wang, L., Hao, H., Volkmann, D., Menzel, D., Mancuso, S., Baluška, F., & Lin, J. (2012) · The Plant Cell · doi:10.1105/tpc.111.094284 · Cited by 131 · see citing works
“Furthermore, Matsuda et al. (2011) found that NPH3-like and PGP-like genes have similar expression patterns in the BL perception organ of maize (Zea mays) coleoptiles, implying a potential cross-link between different signaling pathways via NPH3/NPY1 scaffold proteins.”
BackgroundOrgan-specific remodeling of the Arabidopsis transcriptome in response to spaceflight
Paul, A., Żupańska, A. K., Schultz, E. R., & Ferl, R. J. (2013) · BMC Plant Biology · doi:10.1186/1471-2229-13-112 · Cited by 114 · see citing works
“At least one gene, PGP18, has been associated with both light signal perception and cell wall remodeling [35].”
Phototropism: at the crossroads of light-signaling pathways
Goyal, A., Szarzynska, B., & Fankhauser, C. (2013) · Trends in Plant Science · doi:10.1016/j.tplants.2013.03.002 · Cited by 109 · see citing works
Wang, B., Bailly, A., Zwiewka, M., et al. (2013) · The Plant Cell · doi:10.1105/tpc.112.105999 · Cited by 98 · see citing works
Phototropism: Translating light into directional growth
Hohm, T., Preuten, T., & Fankhauser, C. (2012) · American Journal of Botany · doi:10.3732/ajb.1200299 · Cited by 91 · see citing works
Auxin transport during root gravitropism: transporters and techniques
Geisler, M. M., Wang, B., & Zhu, J. (2013) · Plant Biology · doi:10.1111/plb.12030 · Cited by 89 · see citing works
“Nevertheless, they still function in longrange transport of auxin, as the described abcb mutants show defects in their content (Geisler et al. 2005; Geisler & Murphy 2006; Matsuda et al. 2011; Fig.”
BackgroundBlue‐light‐induced PIN 3 polarization for root negative phototropic response in Arabidopsis
Zhang, K., Xu, H., Yuan, T., Zhang, L., & Lu, Y. (2013) · The Plant Journal · doi:10.1111/tpj.12298 · Cited by 65 · see citing works
Strategies of seedlings to overcome their sessile nature: auxin in mobility control
Žádníková, P., Smet, D., Zhu, Q., Straeten, D. V. D., & Benková, E. (2015) · Frontiers in Plant Science · doi:10.3389/fpls.2015.00218 · Cited by 53 · see citing works
“Expression and protein localization of PHOT1 in coleoptile tips perfectly complied with the predicted perception site for phototropism (Knieb et al., 2004; Matsuda et al., 2011).”
BackgroundDefining the Site of Light Perception and Initiation of Phototropism in Arabidopsis
Preuten, T., Hohm, T., Bergmann, S., & Fankhauser, C. (2013) · Current Biology · doi:10.1016/j.cub.2013.07.079 · Cited by 46 · see citing works
“, the sites of signal perception and phototropic bending are distinct [10–12].”
InfluentialLive Single-Cell Plant Hormone Analysis by Video-Mass Spectrometry
Shimizu, T., Miyakawa, S., Esaki, T., et al. (2015) · Plant and Cell Physiology · doi:10.1093/pcp/pcv042 · Cited by 46 · see citing works
Self-citationdo Amaral, F. P., Bueno, J. C. F., Hermes, V. S., & Arisi, A. C. M. (2014) · Symbiosis · doi:10.1007/s13199-014-0270-6 · Cited by 42 · see citing works
Potassium nutrition of maize: Uptake, transport, utilization, and role in stress tolerance
Zhang, M., Hu, Y., Han, W., et al. (2023) · The Crop Journal · doi:10.1016/j.cj.2023.02.009 · Cited by 36 · see citing works
Nishimura, T., Matano, N., Morishima, T., 柿沼, 千., Hayashi, K., Komano, T., Kubo, M., Hasebe, M., Kasahara, H., Kamiya, Y., et al. (2012) · Plant and Cell Physiology · doi:10.1093/pcp/pcs112 · Cited by 33 · see citing works
“In addition, PIN1s and PGP (P-glycoprotein)-like genes are expressed in the tip region of the coleoptile (Matsuda et al. 2011).”
BackgroundSelf-citationShen, C., Yue, R., Bai, Y., Feng, R., Sun, T., Wang, X., Yang, Y., Tie, S., & Wang, H. (2015) · Plant and Cell Physiology · doi:10.1093/pcp/pcv113 · Cited by 29 · see citing works
“The PGP/ABCB gene family has been mainly studied in Arabidopsis, and briefly in sorghum and maize (Zea mays L.) (Matsuda et al. 2011; Shen et al. 2013).”
BackgroundTranscriptional Profiles Underlying the Effects of Methyl Jasmonate on Apple Ripening
Feng, S., Sun, J., Sun, S., et al. (2016) · Journal of Plant Growth Regulation · doi:10.1007/s00344-016-9636-8 · Cited by 26 · see citing works
Stem phototropism toward blue and ultraviolet light
Legris, M., & Boccaccini, A. (2020) · Physiologia Plantarum · doi:10.1111/ppl.13098 · Cited by 24 · see citing works
Light-dependent control of redox balance and auxin biosynthesis in plants
Yokawa, K., Koshiba, T., & Baluška, F. (2014) · Plant Signaling & Behavior · doi:10.4161/psb.29522 · Cited by 24 · see citing works
Self-citationBailly, A., Wang, B., Zwiewka, M., et al. (2013) · The Plant Journal · doi:10.1111/tpj.12369 · Cited by 24 · see citing works
“Differences to the wild type were greatly enhanced at apical ends of the stems, correlated with younger, developing tissues (Matsuda et al., 2011) and with higher auxin contents on one hand, and higher ABCB, primarily ABCB1, expression on the other hand [Figure S5 (b)].”
BackgroundYamamoto, K., Suzuki, T., Aihara, Y., Haga, K., Sakai, T., & Nagatani, A. (2013) · Plant and Cell Physiology · doi:10.1093/pcp/pct184 · Cited by 22 · see citing works
“Although the detailed expression patterns of NPH3 and RPT2 in the hypocotyl are not known yet in Arabidopsis, an NPH3-like gene in maize, which shows high similarity to Arabidopsis NPH3, is exclusively expressed in the top part of the coleoptiles (Matsuda et al. 2011).”
BackgroundThe action of enhancing weak light capture via phototropic growth and chloroplast movement in plants
Xin, G.-Y., Li, L.-P., Wang, P.-T., Li, X.-Y., Han, Y.-J., & Zhao, X. (2022) · Stress Biology · doi:10.1007/s44154-022-00066-x · Cited by 17 · see citing works
“Additionally, in maize, the NPH3 and PGP genes are specifically expressed at the tip of the maize coleoptile, similar to the expression pattern observed in Arabidopsis (Matsuda et al., 2011).”
BackgroundSuzuki, H., Okamoto, A., Kojima, A., Nishimura, T., Takano, M., Kagawa, T., Kadota, A., Kanegae, T., & Koshiba, T. (2014) · Planta · doi:10.1007/s00425-014-2082-6 · Cited by 12 · see citing works
Self-citationThe Light Awakens! Sensing Light and Darkness
Kharshiing, E. V., Sreelakshmi, Y., & Sharma, R. P. (2019) · Springer eBooks · doi:10.1007/978-981-13-8922-1_2 · Cited by 12 · see citing works
Metal ion transport in maize: survival in a variable stress environment
Wang, K., Wu, Z., Zhang, M., Lu, X., Lai, J., Zhang, M., & Wang, Y. (2025) · Journal of genetics and genomics/Journal of Genetics and Genomics · doi:10.1016/j.jgg.2025.01.005 · Cited by 12 · see citing works
Intercellular Transport of Auxin
Reemmer, J., & Murphy, A. S. (2014) · Springer eBooks · doi:10.1007/978-3-7091-1526-8_5 · Cited by 11 · see citing works
Low-fluence blue light-induced phosphorylation of Zmphot1 mediates the first positive phototropism
Suzuki, H., Koshiba, T., Fujita, C., Yamauchi, Y., Kimura, T., Isobe, T., Sakai, T., Taoka, M., & Okamoto, T. (2019) · Journal of Experimental Botany · doi:10.1093/jxb/erz344 · Cited by 11 · see citing works
Self-citationThe signalling pathways and regulatory mechanism of jasmonates in fruit ripening
Shil, S., Das, S., Rime, J., et al. (2024) · Acta Physiologiae Plantarum · doi:10.1007/s11738-024-03750-9 · Cited by 10 · see citing works
“In contrast, it was also observed that MeJA treatment resulted in the up-regulation of auxin transport-related gene ABCB15 (Matsuda et al. 2011) and the IAA-amino acid hydrolase ILR1 (Leclercq et al. 2002) in treated apples (adapted from the original statement).”
Deng, Z., Wang, Z., & Kutschera, U. (2016) · PROTOPLASMA · doi:10.1007/s00709-016-1023-6 · Cited by 6 · see citing works
“Recent studies revealed that not only the tip but also the lower region of the maize coleoptile may respond to some extent to BL (Matsuda et al. 2011; Suzuki et al. 2014).”
Suzuki, H., Matano, N., Nishimura, T., & Koshiba, T. (2014) · Plant Signaling & Behavior · doi:10.4161/psb.29077 · Cited by 5 · see citing works
“Screening of 7-B3 using maize coleoptiles Previously, we demonstrated that the maize coleoptile tip is the region of IAA biosynthesis, and that the synthesized IAA is transported into the coleoptile elongation zone, resulting in gravitropic and phototropic responses.(8,28) To screen for new inhibitors of IAA transport…”
BackgroundSelf-citationAuxin Biosynthesis and Polar Auxin Transport During Tropisms in Maize Coleoptiles
Nishimura, T., & Koshiba, T. (2013) · Signaling and communication in plants · doi:10.1007/978-3-642-35299-7_11 · Cited by 2 · see citing works
Self-citationDetermination of Auxin Flow During Phototropic Responses Using Fluorescent Auxin Analogs
Sakai, T. (2019) · Methods in molecular biology · doi:10.1007/978-1-4939-9015-3_12 · Cited by 1 · see citing works
Xu, Y., & Qi, Y. (2014) · Signaling and communication in plants · doi:10.1007/978-3-319-06511-3_11 · Cited by 1 · see citing works
Kościarz-Grzesiok, A., Sieroń–Stołtny, K., Polak, M., et al. (2016) · General Physiology and Biophysics · doi:10.4149/gpb_2016010 · Cited by 1 · see citing works
“Regulation of IAA biosynthesis and/or transport is controlled by environmental stimuli (Iino 1982; Fuchs et al. 2003; Mori et al. 2005; Nishimura et al. 2006; Matsuda et al. 2011).”
BackgroundInfluentialIndole-3-Acetic Acid Biosynthesis and Gravitropic Response in Maize Coleoptiles
Nishimura, T., & Koshiba, T. (2011) · Biological Sciences in Space · doi:10.2187/bss.25.37
“More recently, we developed a simpler system with 2-cm coleoptile segments detached from maize seedlings to investigate gravi- and phototropic curvatures (Nishimura et al., 2009; Matsuda et al., 2011).”
BackgroundMethodInfluentialSelf-citationSuzuki, H., Takebayashi, Y., Watanabe, S., et al. (2026) · Journal of Plant Research · doi:10.1007/s10265-026-01739-8
“…IAA is synthesized in the tip regions of maize coleoptiles (Mori et al. 2005; Nishimura et al. 2014; Sugawara et al. 2015), and that IAA is asymmetrically distributed within maize coleoptiles in response to gravity or blue light (Matsuda et al. 2011; Nishimura et al. 2009; Sugawara et al. 2015).”
- Authors
- Matsuda, S., Kajizuka, T., Kadota, A., Nishimura, T., & Koshiba, T.
- Affiliations
- Tokyo Metropolitan University (JP)
- Venue
- Journal of Experimental Botany
- Publisher
- Oxford University Press (OUP)
- Published
- 2011-03-31
- Volume
- 62
- Issue
- 10
- Pages
- 3459-3466
- ISSN
- 0022-0957 (ISSN-L)
- 1460-2431
- PMC
- PMC3130171
- OpenAlex
- W1964846207
- Semantic Scholar
- 69956eb29f544f0edbf01fdc268b79a6d72a8b71
- Cited by
- 37
- References
- 45
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 1 · 2023: 1 · 2022: 1 · 2020: 1 · 2019: 3 · 2016: 4 · 2015: 3 · 2014: 6 · 2013: 10 · 2012: 4
- FWCI
- 8.07
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- cc-by-nc
- Locations
- Journal of Experimental Botany (publishedVersion, cc-by-nc)
- PubMed Central (publishedVersion, cc-by-nc)
- PubMed (publishedVersion)
- Funders
- Ministry of Education, Culture, Sports, Science and Technology
- Tokyo Metropolitan University
- Directorate for Biological Sciences
- Japan Society for the Promotion of Science
- Topics
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Light effects on plants
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Parasitism and Resistance
- Keywords
- phototropism, NPH3, maize coleoptiles, indole-3-acetic acid, phot1, PIN auxin transporters, auxin efflux carriers, gene expression
- MeSH terms
- Biological Transport, Zea mays, Indoleacetic Acids, Light, Plant Proteins, Phototropism, Cotyledon, Reverse Transcriptase Polymerase Chain Reaction
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