The DOI matches its Crossref record; 39 of the 39 references it cites were found in a registry or an index.
HMDD v2.0: a database for experimentally supported human microRNA and disease associations
Open accessAbstract
Comprehensive databases of microRNA-disease associations are continuously demanded in biomedical researches. The recently launched version 3.0 of Human MicroRNA Disease Database (HMDD v3.0) manually collects a significant number of miRNA-disease association entries from literature. Comparing to HMDD v2.0, this new version contains 2-fold more entries. Besides, the associations have been more accurately classified based on literature-derived evidence code, which results in six generalized categories (genetics, epigenetics, target, circulation, tissue and other) covering 20 types of detailed evidence code. Furthermore, we added new functionalities like network visualization on the web interface. To exemplify the utility of the database, we compared the disease spectrum width of miRNAs (DSW) and the miRNA spectrum width of human diseases (MSW) between version 3.0 and 2.0 of HMDD. HMDD is freely accessible at http://www.cuilab.cn/hmdd. With accumulating evidence of miRNA-disease associations, HMDD database will keep on growing in the future.
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Cites
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Cited by
miRTarBase 2020: updates to the experimentally validated microRNA–target interaction database
Huang, H.-Y., Lin, Y.-C.-D., Li, J., Huang, K.-Y., Shrestha, S., Hong, H.-C., Tang, Y., Chen, Y.-G., Jin, C.-N., Yu, Y., et al. (2019) · Nucleic Acids Research · doi:10.1093/nar/gkz896 · Cited by 1,259
Self-citationJarada, T. N., Rokne, J. G., & Alhajj, R. (2020) · Journal of Cheminformatics · doi:10.1186/s13321-020-00450-7 · Cited by 384
TransmiR v2.0: an updated transcription factor-microRNA regulation database
Tong, Z., Cui, Q., Wang, J., & Zhou, Y. (2019) · Nucleic Acids Research · doi:10.1093/nar/gky1023 · Cited by 356
Self-citationLiu, Y., Zeng, X., He, Z., & Zou, Q. (2017) · IEEE/ACM Transactions on Computational Biology and Bioinformatics · doi:10.1109/tcbb.2016.2550432 · Cited by 284
Prediction of potential disease-associated microRNAs using structural perturbation method
Zeng, X., Liu, L., Lü, L., & Zou, Q. (2018) · Bioinformatics · doi:10.1093/bioinformatics/bty112 · Cited by 235
Metadata
- Authors
- Li, Y., Qiu, C., Tu, J., Geng, B., Yang, J., Jiang, T., & Cui, Q.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2013-11-04
- Volume
- 42
- Issue
- D1
- Pages
- D1070-D1074
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W2158135353
- Cited by
- 1,160
- References
- 39
- FWCI
- 10.55
- Type
- journal article
- Language
- en
- Open access
- gold
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- Li, Y., Qiu, C., Tu, J., Geng, B., Yang, J., Jiang, T., & Cui, Q. (2014). HMDD v2.0: a database for experimentally supported human microRNA and disease associations. Nucleic Acids Research. https://doi.org/10.1093/nar/gkt1023
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