Foxo3 circular RNA retards cell cycle progression via forming ternary complexes with p21 and CDK2
Open accessAbstract
Most RNAs generated by the human genome have no protein-coding ability and are termed non-coding RNAs. Among these include circular RNAs, which include exonic circular RNAs (circRNA), mainly found in the cytoplasm, and intronic RNAs (ciRNA), predominantly detected in the nucleus. The biological functions of circular RNAs remain largely unknown, although ciRNAs have been reported to promote gene transcription, while circRNAs may function as microRNA sponges. We demonstrate that the circular RNA circ-Foxo3 was highly expressed in non-cancer cells and were associated with cell cycle progression. Silencing endogenous circ-Foxo3 promoted cell proliferation. Ectopic expression of circ-Foxo3 repressed cell cycle progression by binding to the cell cycle proteins cyclin-dependent kinase 2 (also known as cell division protein kinase 2 or CDK2) and cyclin-dependent kinase inhibitor 1 (or p21), resulting in the formation of a ternary complex. Normally, CDK2 interacts with cyclin A and cyclin E to facilitate cell cycle entry, while p21works to inhibit these interactions and arrest cell cycle progression. The formation of this circ-Foxo3-p21-CDK2 ternary complex arrested the function of CDK2 and blocked cell cycle progression.
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CircRNAs act as miRNA sponges by binding and inhibiting miRNAs, thereby regulating target gene expression at transcriptional and post-transcriptional levels.
“Similar to competitive endogenous RNA (ceRNA), circRNAs act as sponges to bind and inhibit the activity of miRNAs [14], thus regulating the expression of target genes at the transcriptional and post-transcriptional levels through destabilization and translational silencing of mRNAs [15].”
From Circular RNAs in depression: Biogenesis, function, expression, and therapeutic potential (2021) · cites this paper as [15]
circFoxo3 produces anti-proliferative effects and blocks cell cycle progression by weakening CDK2 activity through formation of the circFoxo3-p21-CDK2 ternary complex.
“CircFoxo3 produces anti-proliferative effects and blocks cell cycle progression by weakening the activity of cyclin-dependent kinase 2 (CDK2) through formation of the circFoxo3-p21-CDK2 ternary complex [15].”
From Circular RNAs in depression: Biogenesis, function, expression, and therapeutic potential (2021) · cites this paper as [15]
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Cites
Circular RNAs are a large class of animal RNAs with regulatory potency
Memczak, S., Jens, M., Elefsinioti, A., Torti, F., Krueger, J., Rybak, A., Maier, L., Mackowiak, S. D., Gregersen, L. H., Munschauer, M., et al. (2013) · Nature · doi:10.1038/nature11928 · Cited by 7,990 · see citing works
Natural RNA circles function as efficient microRNA sponges
Hansen, T. B., Jensen, T. I., Clausen, B. H., Bramsen, J. B., Finsen, B., Damgaard, C. K., & Kjems, J. (2013) · Nature · doi:10.1038/nature11993 · Cited by 7,985 · see citing works
The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases.
Wade Harper, J. (1993) · Cell · doi:10.1016/0092-8674(93)90499-g · Cited by 5,651 · see citing works
Exon-intron circular RNAs regulate transcription in the nucleus
Li, Z., Huang, C., Bao, C., Chen, L., Lin, M., Wang, X., Zhong, G., Yu, B., Hu, W., Dai, L., et al. (2015) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.2959 · Cited by 2,905 · see citing works
Detecting and characterizing circular RNAs
Jeck, W. R., & Sharpless, N. E. (2014) · Nature Biotechnology · doi:10.1038/nbt.2890 · Cited by 2,685 · see citing works
Salzman, J., Gawad, C., Wang, P. L., Lacayo, N. J., & Brown, P. O. (2012) · PLoS ONE · doi:10.1371/journal.pone.0030733 · Cited by 2,457 · see citing works
The STAT3-Binding Long Noncoding RNA lnc-DC Controls Human Dendritic Cell Differentiation
Wang, P., Xue, Y., Han, Y., Li, L., Wu, C., Xu, S., Jiang, Z., Xu, J., Liu, Q., & Cao, X. (2014) · Science · doi:10.1126/science.1251456 · Cited by 1,106 · see citing works
Circular transcripts of the testis-determining gene Sry in adult mouse testis
Capel, B., Swain, A., Nicolis, S. K., Hacker, A., Walter, M. A., Koopman, P. A., Goodfellow, P. N., & Lovell-Badge, R. H. (1993) · Cell · doi:10.1016/0092-8674(93)90279-y · Cited by 1,100 · see citing works
Analysis of Intron Sequences Reveals Hallmarks of Circular RNA Biogenesis in Animals
Ivanov, A., Memczak, S., Wyler, E., Torti, F., Porath, H. T., Orejuela, M. R., Piechotta, M., Levanon, E. Y., Landthaler, M., Dieterich, C., et al. (2014) · Cell Reports · doi:10.1016/j.celrep.2014.12.019 · Cited by 1,092 · see citing works
The emerging roles of forkhead box (Fox) proteins in cancer
Myatt, S. S., & Lam, E. W. ‐. (2007) · Nature reviews. Cancer · doi:10.1038/nrc2223 · Cited by 1,065 · see citing works
Regulation of retinoblastoma protein functions by ectopic expression of human cyclins
Hinds, P. W., Mittnacht, S., Dulić, V., Arnold, A., Reed, S. I., & Weinberg, R. A. (1992) · Cell · doi:10.1016/0092-8674(92)90249-c · Cited by 998 · see citing works
Lost in Transcription: p21 Repression, Mechanisms, and Consequences
Gartel, A. L., & Radhakrishnan, S. K. (2005) · Cancer Research · doi:10.1158/0008-5472.can-04-3995 · Cited by 819 · see citing works
Circular RNA Is Expressed across the Eukaryotic Tree of Life
Wang, P. L., Bao, Y., Yee, M., Barrett, S. P., Hogan, G. J., Olsen, M. N., Dinneny, J. R., Brown, P. O., & Salzman, J. (2014) · PLoS ONE · doi:10.1371/journal.pone.0090859 · Cited by 754 · see citing works
Circular RNA ITCH has inhibitory effect on ESCC by suppressing the Wnt/β-catenin pathway
Li, F., Zhang, L.-Y., Li, W., Deng, J., Zheng, J., An, M., Lu, J.-C., & Zhou, Y.-F. (2015) · OncoTarget · doi:10.18632/oncotarget.3469 · Cited by 669 · see citing works
A Circuitous Route to Noncoding RNA
Wilusz, J. E., & Sharp, P. A. (2013) · Science · doi:10.1126/science.1238522 · Cited by 533 · see citing works
Cyclin A in cell cycle control and cancer
Yam, C. H., Fung, T. K., & Poon, R. Y. C. (2002) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-002-8510-y · Cited by 520 · see citing works
Levkau, B., Koyama, H., Raines, E. W., Clurman, B. E., Herren, B., Orth, K., Roberts, J. M., & Ross, R. (1998) · Molecular Cell · doi:10.1016/s1097-2765(00)80055-6 · Cited by 442 · see citing works
Cloning and Characterization of Three Human Forkhead Genes That Comprise an FKHR-like Gene Subfamily
Anderson, M. J., Viars, C. S., Czekay, S., Cavenee, W. K., & Arden, K. C. (1998) · Genomics · doi:10.1006/geno.1997.5122 · Cited by 357 · see citing works
Gene Expression Is Circular: Factors for mRNA Degradation Also Foster mRNA Synthesis
Haimovich, G., Medina, D. A., Causse, S., Garber, M. G., Millán-Zambrano, G., Barkai, O., Chávez, S., Pérez-Ortín, J. E., Darzacq, X., & Choder, M. (2013) · Cell · doi:10.1016/j.cell.2013.05.012 · Cited by 355 · see citing works
Yang, W., Du, W. W., Li, X., Yee, A., & Yang, B. B. (2015) · Oncogene · doi:10.1038/onc.2015.460 · Cited by 314 · see citing works
Self-citationDistinct roles for cyclins E and A during DNA replication complex assembly and activation
Coverley, D., Laman, H., & Laskey, R. A. (2002) · Nature Cell Biology · doi:10.1038/ncb813 · Cited by 297 · see citing works
Jeyapalan, Z., Deng, Z., Shatseva, T., Fang, L., He, C., & Yang, B. B. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq1003 · Cited by 191 · see citing works
Self-citationAbouHaidar, M. G., Venkataraman, S., Golshani, A., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1402814111 · Cited by 178 · see citing works
Shan, S. W., Fang, L., Shatseva, T., Rutnam, Z. J., Yang, X., Lu, W.-Y., Xuan, J. W., Deng, Z., & Yang, B. B. (2013) · Journal of Cell Science · doi:10.1242/jcs.122895 · Cited by 176 · see citing works
Self-citationTERRA transcripts are bound by a complex array of RNA-binding proteins
de Silanes, I. L., d’Alcontres, M. S., & Blasco, M. A. (2010) · Nature Communications · doi:10.1038/ncomms1032 · Cited by 144 · see citing works
Distinct Activation Pathways Confer Cyclin-Binding Specificity on Cdk1 and Cdk2 in Human Cells
Merrick, K. A., Larochelle, S., Zhang, C., Allen, J. J., Shokat, K. M., & Fisher, R. P. (2008) · Molecular Cell · doi:10.1016/j.molcel.2008.10.022 · Cited by 95 · see citing works
MiR-210 disturbs mitotic progression through regulating a group of mitosis-related genes
He, J., Wu, J., Xu, N., Xie, W., Li, M., Li, J., Jiang, Y., Yang, B. B., & Zhang, Y. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks995 · Cited by 70 · see citing works
Self-citationmiR-17 extends mouse lifespan by inhibiting senescence signaling mediated by MKP7
Du, W. W., Yang, W., Fang, L., Xuan, J. W., Li, H., Khorshidi, A., Gupta, S., Li, X., & Yang, B. B. (2014) · Cell Death and Disease · doi:10.1038/cddis.2014.305 · Cited by 68 · see citing works
Self-citationWu, Y., Zhang, Y., Cao, L., Chen, L., Lee, V., Zheng, P., Kiani, C., Adams, M. E., Ang, L. C., Paiwand, F., et al. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m100618200 · Cited by 50 · see citing works
Self-citationYang, B., Cao, L., Kiani, C., Lee, V., Zhang, Y., Adams, M. E., & Yang, B. B. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.m001443200 · Cited by 50 · see citing works
Self-citationCao, L., Yao, Y., Lee, V., Kiani, C., Spaner, D., Lin, Z., Zhang, Y., Adams, M. E., & Yang, B. B. (2000) · Journal of Cellular Biochemistry · doi:10.1002/(sici)1097-4644(20000615)77:4 · Cited by 42 · see citing works
Self-citationCho, E.-C., Kuo, M.-L., Liu, X., Yang, L., Hsieh, Y., Wang, J., Cheng, Y., & Yen, Y. (2014) · Oncotarget · doi:10.18632/oncotarget.2044 · Cited by 36 · see citing works
Mitra, J., Enders, G. H., Azizkhan‐Clifford, J., et al. (2006) · Cell Cycle · doi:10.4161/cc.5.6.2604 · Cited by 27 · see citing works
Mad1 Function in Cell Proliferation and Transcriptional Repression Is Antagonized by Cyclin E/CDK2
Rottmann, S., Menkel, A. R., Bouchard, C., et al. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.c400611200 · Cited by 22 · see citing works
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- Authors
- Du, W. W., Yang, W., Liu, E., Yang, Z., Dhaliwal, P., & Yang, B. B.
- Affiliations
- Sunnybrook Health Science Centre (CA)
- Corresponding author
- Du, William W.
- Yang, Weining
- Yang, Burton B.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2016-02-09
- Volume
- 44
- Issue
- 6
- Pages
- 2846-2858
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- PMC
- PMC4824104
- OpenAlex
- W2266356262
- Cited by
- 1,699
- References
- 34
- Citations by year
- 2026: 55 · 2025: 105 · 2024: 148 · 2023: 149 · 2022: 215 · 2021: 298 · 2020: 273 · 2019: 192 · 2018: 155 · 2017: 80 · 2016: 24
- FWCI
- 78.11
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Nucleic Acids Research (publishedVersion, cc-by-nc)
- Europe PMC (PubMed Central) (publishedVersion, cc-by-nc)
- PubMed Central (publishedVersion, cc-by-nc)
- PubMed (publishedVersion)
- HighWire Press Open Archive (submittedVersion)
- Funders
- Canadian Institutes of Health Research
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Circular RNAs in diseases
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer-related molecular mechanisms research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Keywords
- circular RNA, cell cycle progression, CDK2, p21, ternary complex, cyclin-dependent kinase inhibition, cell proliferation, non-coding RNA
- MeSH terms
- Forkhead Box Protein O3, Animals, Binding Sites, Cell Cycle, Cell Line, Cell Nucleus, Cytoplasm, Fibroblasts, Gene Expression Regulation, Humans, Nucleic Acid Conformation, Organ Specificity, Protein Binding, Signal Transduction, Cyclin A, Cyclin E, RNA, Untranslated, NIH 3T3 Cells, Cell Line, Tumor, Cell Proliferation, Cyclin-Dependent Kinase Inhibitor p21, Cyclin-Dependent Kinase 2, Mice, Forkhead Transcription Factors
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