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Cited by 993

The DOI matches its Crossref record; 15 of the 15 references it cites were found in a registry or an index.

New developments on the Encyclopedia of DNA Elements (ENCODE) data portal

Open access
Luo, Yunhai, Hitz, Benjamin C, Gabdank, Idan, Hilton, Jason A, Kagda, Meenakshi S, Lam, Bonita, Myers, Zachary, Sud, Paul, Jou, Jennifer, Lin, Khine, Baymuradov, Ulugbek K, Graham, Keenan, Litton, Casey, Miyasato, Stuart R, Strattan, J Seth, Jolanki, Otto, Lee, Jin-Wook, Tanaka, Forrest Y, Adenekan, Philip, O’Neill, Emma, Cherry, J Michael·2020·Nucleic Acids Research
DOI 10.1093/nar/gkz1062
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Abstract

The Encyclopedia of DNA Elements (ENCODE) is an ongoing collaborative research project aimed at identifying all the functional elements in the human and mouse genomes. Data generated by the ENCODE consortium are freely accessible at the ENCODE portal (https://www.encodeproject.org/), which is developed and maintained by the ENCODE Data Coordinating Center (DCC). Since the initial portal release in 2013, the ENCODE DCC has updated the portal to make ENCODE data more findable, accessible, interoperable and reusable. Here, we report on recent updates, including new ENCODE data and assays, ENCODE uniform data processing pipelines, new visualization tools, a dataset cart feature, unrestricted public access to ENCODE data on the cloud (Amazon Web Services open data registry, https://registry.opendata.aws/encode-project/) and more comprehensive tutorials and documentation.

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Citations

Cites

Research works printed but not linked: 24

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Metadata

Authors
Luo, Y., Hitz, B. C., Gabdank, I., Hilton, J. A., Kagda, M. S., Lam, B., Myers, Z., Sud, P., Jou, J., Lin, K., Baymuradov, U. K., Graham, K., Litton, C., Miyasato, S. R., Strattan, J. S., Jolanki, O., Lee, J.-W., Tanaka, F. Y., Adenekan, P., O’Neill, E., & Cherry, J. M.
Venue
Nucleic Acids Research
Publisher
Oxford University Press (OUP)
Published
2019-11-12
Volume
48
Issue
D1
Pages
D882-D889
ISSN
  • 0305-1048 (ISSN-L)
  • 1362-4962
DOI
10.1093/nar/gkz1062
OpenAlex
W2988126442
Cited by
993
References
15
FWCI
6.16
Type
journal article
Language
en
Open access
gold
Licence
creativecommons.org/licenses/by/4.0/ (vor)
Funders
  • National Human Genome Research Institute
  • National Institutes of Health (U24 HG009397)

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