The DOI matches its Crossref record; 29 of the 29 references it cites were found in a registry or an index.
Ensembl Genomes 2020—enabling non-vertebrate genomic research
Open accessAbstract
Ensembl Genomes (http://www.ensemblgenomes.org) is an integrating resource for genome-scale data from non-vertebrate species, complementing the resources for vertebrate genomics developed in the context of the Ensembl project (http://www.ensembl.org). Together, the two resources provide a consistent set of interfaces to genomic data across the tree of life, including reference genome sequence, gene models, transcriptional data, genetic variation and comparative analysis. Data may be accessed via our website, online tools platform and programmatic interfaces, with updates made four times per year (in synchrony with Ensembl). Here, we provide an overview of Ensembl Genomes, with a focus on recent developments. These include the continued growth, more robust and reproducible sets of orthologues and paralogues, and enriched views of gene expression and gene function in plants. Finally, we report on our continued deeper integration with the Ensembl project, which forms a key part of our future strategy for dealing with the increasing quantity of available genome-scale data across the tree of life.
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Citations
Cites
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Aspergillus fumigatus Can Display Persistence to the Fungicidal Drug Voriconazole
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Metadata
- Authors
- Howe, K. L., Contreras-Moreira, B., De Silva, N., Maslen, G., Akanni, W., Allen, J., Alvarez-Jarreta, J., Barba, M., Bolser, D. M., Cambell, L., Carbajo, M., Chakiachvili, M., Christensen, M., Cummins, C., Cuzick, A., Davis, P., Fexova, S., Gall, A., George, N., Gil, L., Gupta, P., Hammond-Kosack, K. E., Haskell, E., Hunt, S. E., Jaiswal, P., Janacek, S. H., Kersey, P. J., Langridge, N., Maheswari, U., Maurel, T., McDowall, M. D., Moore, B., Muffato, M., Naamati, G., Naithani, S., Olson, A., Papatheodorou, I., Patricio, M., Paulini, M., Pedro, H., Perry, E., Preece, J., Rosello, M., Russell, M., Sitnik, V., Staines, D. M., Stein, J., Tello-Ruiz, M. K., Trevanion, S. J., Urban, M., Wei, S., Ware, D., Williams, G., Yates, A. D., & Flicek, P.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2019-10-10
- Volume
- 48
- Issue
- D1
- Pages
- D689-D695
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W2988240595
- Cited by
- 466
- References
- 29
- FWCI
- 23.49
- Type
- journal article
- Language
- en
- Open access
- gold
- Funders
- UK Biosciences and Biotechnology Research Council (BB/P024602/1, BB/P016855/1, BB/S02011X/1, BB/M028372/1, BB/L024225/1)
- Wellcome Trust (108749/Z/15/Z, 201535/Z/16/Z)
- Medical Research Council (MR/S000453/1)
- National Science Foundation (IOS-1127112)
- United States Department of Agriculture (58-8062-2100-044)
- Bill and Melinda Gates Foundation (B0436x13)
- National Human Genome Research Institute
- National Institutes of Health (U24HG002223)
- National Institute of Allergy and Infectious Diseases (HHSN272201400029C)
- European Union's Horizon 2020 Research and Innovation Programme (731060, 654248)
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- Howe, K. L., Contreras-Moreira, B., De Silva, N., Maslen, G., Akanni, W., Allen, J., Alvarez-Jarreta, J., Barba, M., Bolser, D. M., Cambell, L., Carbajo, M., Chakiachvili, M., Christensen, M., Cummins, C., Cuzick, A., Davis, P., Fexova, S., Gall, A., George, N., . . . Flicek, P. (2020). Ensembl Genomes 2020—enabling non-vertebrate genomic research. Nucleic Acids Research. https://doi.org/10.1093/nar/gkz890
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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