Practitioner’s guide to latent class analysis: Methodological considerations and common pitfalls
Open accessAbstract
Latent class analysis is a probabilistic modeling algorithm that allows clustering of data and statistical inference. There has been a recent upsurge in the application of latent class analysis in the fields of critical care, respiratory medicine, and beyond. In this review, we present a brief overview of the principles behind latent class analysis. Furthermore, in a stepwise manner, we outline the key processes necessary to perform latent class analysis including some of the challenges and pitfalls faced at each of these steps. The review provides a one-stop shop for investigators seeking to apply latent class analysis to their data.
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LCGA findings should be interpreted with caution, as larger sample sizes are generally preferable when using this technique.
“LCGA facilitates the classification of individuals according to their most likely trajectory, although findings should be interpreted with caution, as larger sample sizes are generally preferable when using this technique. (Sinha et al., 2021).”
From Long-term cardiometabolic effects of early institutionalization and foster care: Evidence from the Bucharest Early Intervention Project (2026) · cites this paper as Sinha et al., 2021
In Step 2: Data Set-up (page not available), the paper calls LCA a large-sample method and says smaller samples, particularly N < 300, yield less reliable results. In What is Latent Class Analysis? (page not available), it describes class-membership probabilities, but it defines its discussion of LCA primarily around cross-sectional models. The cited passages do not specifically establish the sample-size advice for LCGA or trajectory classification. (LLM, conf=0.85)
Experimental — accuracy not yet measuredIn LCA, the probabilities of class membership are obtained, which allows statistical inference when determining the most appropriate number of classes for a population, not clear-cut class assignments as occurs in cluster analysis.
“In LCA, the probabilities of class membership are obtained, which in turn allows statistical inference when determining the most appropriate number of classes for a population [44], not clear-cut class assignments as occurs in cluster analysis.”
From Recommendations for empirical syndemics analyses: A stepwise methodological guide (2024) · cites this paper as [44]
The “LCA vs Cluster Analysis” section says LCA estimates class-membership probabilities rather than simply separating observations into clusters, and that LCA permits statistical inference about the appropriate number of classes. It attributes that inference to fit statistics generated by LCA’s model-based approach, not to the membership probabilities themselves. (LLM, conf=0.86)
Experimental — accuracy not yet measuredThe four-class BMI trajectory model demonstrated reasonable entropy (0.88), suggesting accurate class separation.
“In this context, although our four-class BMI trajectory model demonstrated reasonable entropy (0.88), suggesting accurate class separation, the results of the LCGA should be interpreted with caution, as a larger sample size would likely provide higher fit accuracy and greater generalizability (Sinha et al., 2021).”
From Long-term cardiometabolic effects of early institutionalization and foster care: Evidence from the Bucharest Early Intervention Project (2026) · cites this paper as Sinha et al., 2021
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- Authors
- Sinha, P., Calfee, C. S., & Delucchi, K. L.
- Affiliations
- University of California, San Francisco (US)
- Venue
- Critical Care Medicine
- Published
- 2020-11-09
- Volume
- 49
- Issue
- 1
- Pages
- e63-e79
- ISSN
- 0090-3493 (ISSN-L)
- PMC
- PMC7746621
- OpenAlex
- W3102547229
- Cited by
- 1,204
- References
- 56
- Citations by year
- 2026: 386 · 2025: 382 · 2024: 290 · 2023: 98 · 2022: 35 · 2021: 13
- FWCI
- 7.14
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Critical Care Medicine (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- eScholarship (California Digital Library) (submittedVersion)
- Funders
- National Heart, Lung, and Blood Institute (R35HL140026)
- National Institute of General Medical Sciences (T32GM008440)
- Topics
- Social Sciences › Decision Sciences › Management Science and Operations Research › Psychometric Methodologies and Testing
- Physical Sciences › Computer Science › Artificial Intelligence › Bayesian Methods and Mixture Models
- Physical Sciences › Mathematics › Statistics and Probability › Statistical Methods and Applications
- Keywords
- latent class analysis, clustering, stochastic modeling, statistical inference, intensive care, respiratory medicine, methodological pitfalls, data analysis pipeline
- MeSH terms
- Latent Class Analysis, Data Interpretation, Statistical, Humans, Statistics as Topic
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