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Control of Golgi- V-ATPase through Sac1-dependent co-regulation of PI(4)P and cholesterol
Open accessPreprint — published as 10.1038/s41467-025-63125-7 · Paper page
Abstract
Sac1 is a conserved phosphoinositide phosphatase, whose loss-of-function compromises cell and organism viability. Here, we employed acute auxin-inducible Sac1 degradation to identify its immediate downstream effectors in human cells. Most of Sac1 was degraded in ∼1 h, paralleled by increased PI(4)P and decreased cholesterol in the trans-Golgi network (TGN) during the following hour, and superseded by Golgi fragmentation, impaired glycosylation, and selective degradation of TGN proteins by ∼4 h. The TGN disintegration resulted from its acute deacidification caused by disassembly of the Golgi V-ATPase. Mechanistically, Sac1 mediated TGN membrane composition maintained an assembly promoting conformation of the V 0 a2 subunit. Key phenotypes of acute Sac1 degradation were recapitulated in human differentiated trophoblasts, causing processing defects of chorionic gonadotropin, in line with loss-of-function intolerance of the human SACML1 gene. Collectively, our findings reveal that the assembly of the Golgi V-ATPase is controlled by the TGN membrane via Sac1 fuelled lipid exchange.
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Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
Varadi, M., Bertoni, D., Magana, P., Paramval, U., Pidruchna, I., Radhakrishnan, M., Tsenkov, M., Nair, S., Mirdita, M., Yeo, J., et al. (2024) · Nucleic Acids Research · doi:10.1093/nar/gkad1011 · Cited by 2,052
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Metadata
- Authors
- Zhou, X., van der Stoel, M. M., Kaptan, S., Li, H., Li, S., Hölttä, M., Vihinen, H., Jokitalo, E., Thiele, C., Pietiläinen, O., Morioka, S., Sasaki, J., Sasaki, T., Vattulainen, I., & Ikonen, E.
- Affiliations
- University of Helsinki (FI)
- University of Bonn (DE)
- Tokyo Medical and Dental University (JP)
- Corresponding author
- Ikonen, Elina
- ORCID
- Venue
- Nature Communications
- Publisher
- openRxiv
- Published
- 2024-11-05
- Volume
- 16
- Issue
- 1
- Pages
- 7808-7808
- ISSN
- 2041-1723 (ISSN-L)
- PMC
- PMC12371084
- OpenAlex
- W4413376468
- Cited by
- 6
- References
- 2
- Citations by year
- 2026: 5 · 2025: 1
- FWCI
- 2.97
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Nature Communications (publishedVersion, cc-by)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Työväentutkimus Vuosikirja (submittedVersion)
- Funders
- Japan Agency for Medical Research and Development (24gm1710007, CREST)
- European Commission (HORIZON2020, 953489)
- Academy of Finland (332096, 335527, 364185)
- Lundbeckfonden
- Jane ja Aatos Erkon Säätiö
- China Scholarship Council
- Tokyo Medical and Dental University (JPMXP1323015483)
- H. Lundbeck A/S
- Biocenter Finland
- Helsinki Institute of Life Science, Helsingin Yliopisto
- Core Research for Evolutional Science and Technology
- HORIZON EUROPE Marie Sklodowska-Curie Actions (101059424)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › ATP Synthase and ATPases Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biochemistry › Lipid metabolism and biosynthesis
- Keywords
- Sac1, phosphoinositide phosphatase, trans-Golgi network, cholesterol, Golgi fragmentation, membrane acidification, lipid exchange, trophoblast, auxin-inducible degradation
- MeSH terms
- Cholesterol, Glycosylation, Golgi Apparatus, HeLa Cells, Humans, Indoleacetic Acids, Membrane Proteins, Phosphoric Monoester Hydrolases, Trophoblasts, Phosphatidylinositol Phosphates, trans-Golgi Network, Vacuolar Proton-Translocating ATPases, HEK293 Cells
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