Pandemic lineages of extraintestinal pathogenic Escherichia coli

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Diarrheagenic Escherichia coli

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Epidemic Profile of Shiga-Toxin–Producing Escherichia coli O104:H4 Outbreak in Germany

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OUTCOME FOR INFANTS OF VERY LOW BIRTHWEIGHT: SURVEY OF WORLD LITERATURE

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Intercontinental emergence of Escherichia coli clone O25:H4-ST131 producing CTX-M-15

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Clinical and Microbiological Characteristics of Recurrent Escherichia coli Bacteremia

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First Detection of Carbapenem-Resistant Escherichia fergusonii Strains Harbouring Beta-Lactamase Genes from Clinical Samples

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Biofilm Formation and Antimicrobial Susceptibility of E. coli Associated With Colibacillosis Outbreaks in Broiler Chickens From Saskatchewan

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Bacterial genome-wide association study substantiates papGII of Escherichia coli as a major risk factor for urosepsis

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Genomic analysis of phylogenetic group B2 extraintestinal pathogenic E. coli causing infections in dogs in Australia

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Genome sequences of two clinical Escherichia coli isolates harboring the novel colistin-resistance gene variants mcr-1.26 and mcr-1.27

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A National Antimicrobial Resistance Monitoring System Survey of Antimicrobial-Resistant Foodborne Bacteria Isolated from Retail Veal in the United States

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The Escherichia coli Serogroup O1 and O2 Lipopolysaccharides Are Encoded by Multiple O-antigen Gene Clusters

Delannoy, S., Beutin, L., Mariani‐Kurkdjian, P., Fleiss, A., Bonacorsi, S., & Fach, P. (2017) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2017.00030 · Cited by 32

Intestinal Persistence of Colonizing Escherichia coli Strains, Especially ST131-H30, in Relation to Bacterial and Host Factors

Johnson, J. R., Clabots, C., Porter, S. B., Bender, T. L., Johnston, B., & THURAS, P. D. (2021) · The Journal of Infectious Diseases · doi:10.1093/infdis/jiab638 · Cited by 31

Sea Buckthorn Polysaccharide Ameliorates Colitis

Ouyang, Q., Li, X., Liang, Y., & Liu, R. (2024) · Nutrients · doi:10.3390/nu16091280 · Cited by 32

Genetic analysis of invasive Escherichia coli in Scotland reveals determinants of healthcare-associated versus community-acquired infections

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Molecular Characteristics of Extraintestinal Pathogenic E. coli (ExPEC), Uropathogenic E. coli (UPEC), and Multidrug Resistant E. coli Isolated from Healthy Dogs in Spain. Whole Genome Sequencing of Canine ST372 Isolates and Comparison with Human Isolates Causing Extraintestinal Infections

Flament-Simon, S.-C., de Toro, M., García, V., Blanco, J. E., Blanco, M., Alonso, M. P., Goicoa, A., Díaz-González, J., Nicolas-Chanoine, M.-H., & Blanco, J. (2020) · Microorganisms · doi:10.3390/microorganisms8111712 · Cited by 32

Visualization-assisted binning of metagenome assemblies reveals potential new pathogenic profiles in idiopathic travelers’ diarrhea

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Genomic profiling of Escherichia coli isolates from bacteraemia patients: a 3-year cohort study of isolates collected at a Sydney teaching hospital

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Genetic characterization of ESBL-producing and ciprofloxacin-resistant Escherichia coli from Belgian broilers and pigs

Koster, S. D., Ringenier, M., Xavier, B. B., Lammens, C., Coninck, D. I. M. D., Bruyne, K. D., Mensaert, K., den Bergh, M. K.-V., Kluytmans, J. A. J. W., Dewulf, J., et al. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1150470 · Cited by 31

High-Level Multidrug-Resistant Escherichia coli Isolates from Wild Birds in a Large Urban Environment

de Jesus, A. A. B., Freitas, A. A. R., de Souza, J. C., Martins, N., Botelho, L. A. B., Girão, V. B. D. C., Teixeira, L. M., Riley, L. W., & Moreira, B. M. (2018) · Microbial Drug Resistance · doi:10.1089/mdr.2018.0180 · Cited by 30

Phylogenomic analysis of a global collection of Escherichia coli ST38: evidence of interspecies and environmental transmission?

Chowdhury, P. R., Hastak, P., DeMaere, M. Z., Wyrsch, E. R., Li, D., Elankumaran, P., Dolejská, M., Browning, G. F., Marenda, M. S., Gottlieb, T., et al. (2023) · mSystems · doi:10.1128/msystems.01236-22 · Cited by 29

Host dependent maintenance of a blaNDM-1-encoding plasmid in clinical Escherichia coli isolates

Gama, J. A., Kloos, J., Johnsen, P. J., & Samuelsen, Ø. (2020) · Scientific Reports · doi:10.1038/s41598-020-66239-8 · Cited by 29

Prevalence of fluoroquinolone-resistant and broad-spectrum cephalosporin-resistant community-acquired urinary tract infections in Rio de Janeiro: Impact of genotypes ST69 and ST131

da-Silva, A. P. D. S., de Sousa, V. S., Longo, L. G. D. A., Caldera, S., Baltazar, I. C. L., Bonelli, R. R., Santoro‐Lopes, G., Riley, L. W., & Moreira, B. M. (2020) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2020.104452 · Cited by 29

Role of Plasmids in the Ecology and Evolution of “High-Risk” Extraintestinal Pathogenic Escherichia coli Clones

Johnson, T. J. (2021) · EcoSal Plus · doi:10.1128/ecosalplus.esp-0013-2020 · Cited by 29

Extended-spectrum β-lactamase (ESBL)-producing Escherichia coli survey in wild seabirds at a pristine atoll in the southern Atlantic Ocean, Brazil: First report of the O25b-ST131 clone harboring blaCTX-M-8.

Ewbank, A. C., Fuentes-Castillo, D., Sacristán, C., Cardoso, B., Esposito, F., Fuga, B., de Macedo, E. C., Lincopán, N., & Catão-Dias, J. (2022) · Science of the Total Environment · doi:10.1016/j.scitotenv.2021.150539 · Cited by 27

Close genetic linkage between human and companion animal extraintestinal pathogenic Escherichia coli ST127

Elankumaran, P., Browning, G. F., Marenda, M. S., Reid, C. J., & Djordjevic, S. P. (2022) · Current Research in Microbial Sciences · doi:10.1016/j.crmicr.2022.100106 · Cited by 29

A Role for Tn6029 in the Evolution of the Complex Antibiotic Resistance Gene Loci in Genomic Island 3 in Enteroaggregative Hemorrhagic Escherichia coli O104:H4

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Genetic characterization of extended-spectrum β-lactamase-producing Enterobacteriaceae from a biological industrial wastewater treatment plant in Tunisia with detection of the colistin-resistance mcr -1 gene

Hassen, B., Abbassi, M. S., Ruiz-Ripa, L., Mama, O. M., Ibrahim, C., Benlabidi, S., Hassen, A., Torres, C., & Hammami, S. (2020) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiaa231 · Cited by 31

Clinical and molecular characteristics of carbapenem non-susceptible Escherichia coli: A nationwide survey from Oman

Al-Farsi, H. M., Camporeale, A., Ininbergs, K., Al-Azri, S., Muharrmi, Z. A., Al‐Jardani, A., & Giske, C. G. (2020) · PLoS ONE · doi:10.1371/journal.pone.0239924 · Cited by 28

Global molecular epidemiology of carbapenem-resistant Escherichia coli (2002–2017)

Johnston, B., THURAS, P. D., Porter, S. B., Anacker, M. L., VonBank, B., Vagnone, P. S., Witwer, M. L., Castanheira, M., & Johnson, J. R. (2021) · European Journal of Clinical Microbiology & Infectious Diseases · doi:10.1007/s10096-021-04310-6 · Cited by 28

Extraintestinal pathogenic Escherichia coli (ExPEC) reservoirs, and antibiotics resistance trends: a one-health surveillance for risk analysis from “ farm-to-fork ”

Meena, P. R., Priyanka, P., & Singh, A. P. (2022) · Letters in Applied Microbiology · doi:10.1093/lambio/ovac016 · Cited by 29

Extended Spectrum β-Lactamase-Producing Escherichia coli and Klebsiella pneumoniae from Broiler Liver in the Center of Algeria, with Detection of CTX-M-55 and B2/ST131-CTX-M-15 in Escherichia coli

Chenouf, N. S., Carvalho, I., Messaï, C. R., Ruiz-Ripa, L., Mama, O. M., Titouche, Y., Zitouni, A., Hakem, A., & Torres, C. (2020) · Microbial Drug Resistance · doi:10.1089/mdr.2020.0024 · Cited by 27

High prevalence of blaCTX-M and blaSHV among ESBL producing E. coli isolates from beef cattle in China’s Sichuan-Chongqing Circle

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Phylogenetic group and virulence profile classification in Escherichia coli from distinct isolation sources in Mexico.

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Tackling Drug Resistant Infection Outbreaks of Global Pandemic Escherichia coli ST131 Using Evolutionary and Epidemiological Genomics

Downing, T. (2015) · Microorganisms · doi:10.3390/microorganisms3020236 · Cited by 26

Escherichia coli B2 Phylogenetic Subgroups in the Infant Gut Microbiota: Predominance of Uropathogenic Lineages in Swedish Infants and Enteropathogenic Lineages in Pakistani Infants

Nowrouzian, F. L., Clermont, O., Edin, M., Östblom, A., Denamur, É., Wold, A. E., & Adlerberth, I. (2019) · Applied and Environmental Microbiology · doi:10.1128/aem.01681-19 · Cited by 27

Virulence Potential of a Multidrug-Resistant Escherichia coli Strain Belonging to the Emerging Clonal Group ST101-B1 Isolated from Bloodstream Infection

Santos, A. C. D. M., Silva, R. M., Valiatti, T. B., Santos, F. F., Santos-Neto, J. F., Cayô, R., Streling, A. P., Nodari, C. S., Gales, A. C., Nishiyama, M. Y., et al. (2020) · Microorganisms · doi:10.3390/microorganisms8060827 · Cited by 26

Genetic diversity, antimicrobial resistance and extended-spectrum β-lactamase type of Escherichia coli isolates from chicken, dog, pig and yak in Gansu and Qinghai Provinces, China

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Virulome and genome analyses identify associations between antimicrobial resistance genes and virulence factors in highly drug-resistant Escherichia coli isolated from veal calves

Haley, B. J., Kim, S. W., Salaheen, S., Hovingh, E., & Kessel, J. A. S. V. (2022) · PLoS ONE · doi:10.1371/journal.pone.0265445 · Cited by 26

Molecular Epidemiology of Antimicrobial Resistance of Uropathogenic Escherichia coli Isolates from Patients with Urinary Tract Infections in a Tertiary Teaching Hospital in Iran

Neamati, F., Khorshidi, A., Moniri, R., & Tafreshi, S. A. H. (2019) · Microbial Drug Resistance · doi:10.1089/mdr.2019.0184 · Cited by 25

Antibiotic Multidrug Resistance of Escherichia coli Causing Device- and Procedure-related Infections in the United States Reported to the National Healthcare Safety Network, 2013–2017

Kourtis, A. P., Sheriff, E., Weiner, L. M., Elmore, K., Preston, L. E., Dudeck, M. A., & McDonald, L. C. (2020) · Clinical Infectious Diseases · doi:10.1093/cid/ciaa1031 · Cited by 25

Nanoemulsions of Satureja montana Essential Oil: Antimicrobial and Antibiofilm Activity against Avian Escherichia coli Strains

Rinaldi, F., Maurizi, L., Conte, A. L., Marazzato, M., Maccelli, A., Crestoni, M. E., Hanieh, P. N., Forte, J., Conte, M. P., Zagaglia, C., et al. (2021) · Pharmaceutics · doi:10.3390/pharmaceutics13020134 · Cited by 27

Characteristics of Escherichia coli Urine Isolates and Risk Factors for Secondary Bloodstream Infections in Patients with Urinary Tract Infections

Choi, H. J., Jeong, S. H., Shin, K. S., Kim, Y. A., Kim, Y. R., Kim, H. S., Shin, J. H., Shin, J. H., Uh, Y., Bae, S., et al. (2022) · Microbiology Spectrum · doi:10.1128/spectrum.01660-22 · Cited by 27

Whole-genome sequencing of Escherichia coli from retail meat in China reveals the dissemination of clinically important antimicrobial resistance genes

Wang, Q. K., Han, Y.-Y., Zhang, T., Chen, X., Lin, H., Wang, H., & Lei, C. (2024) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2024.110634 · Cited by 24

Free-Ranging Frigates (Fregata magnificens) of the Southeast Coast of Brazil Harbor Extraintestinal Pathogenic Escherichia coli Resistant to Antimicrobials

Saviolli, J. Y., Cunha, M. P. V., Guerra, M. F. L., Irino, K., Catão‐Dias, J. L., & de Carvalho, V. M. (2016) · PLoS ONE · doi:10.1371/journal.pone.0148624 · Cited by 24

Analysis of pCERC7, a small antibiotic resistance plasmid from a commensal ST131 Escherichia coli, defines a diverse group of plasmids that include various segments adjacent to a multimer resolution site and encode the same NikA relaxase accessory protein enabling mobilisation

Moran, R. A., & Hall, R. M. (2016) · Plasmid · doi:10.1016/j.plasmid.2016.11.001 · Cited by 24

Isolation of Shiga toxin-producing Escherichia coli harboring variant Shiga toxin genes from seafood

Prakasan, S., Prabhakar, P., Lekshmi, M., Nayak, B. B., & Kumar, S. H. (2018) · Veterinary World · doi:10.14202/vetworld.2018.379-385 · Cited by 24

Differentiating Epidemic from Endemic or Sporadic Infectious Disease Occurrence

Riley, L. W. (2019) · Microbiology Spectrum · doi:10.1128/microbiolspec.ame-0007-2019 · Cited by 23

Clonal relationships, antimicrobial susceptibilities, and molecular characterization of extended-spectrum beta-lactamase-producing Escherichia coli isolates from urinary tract infections and fecal samples in Southeast Iran

Hashemizadeh, Z., Kalantar-Neyestanaki, D., & Mansouri, S. (2018) · Revista da Sociedade Brasileira de Medicina Tropical · doi:10.1590/0037-8682-0080-2017 · Cited by 24

Whole-genome analysis of extraintestinal Escherichia coli sequence type 73 from a single hospital over a 2 year period identified different circulating clonal groups

Bogema, D. R., McKinnon, J., Liu, M., Hitchick, N., Miller, N., Venturini, C., Iredell, J. R., Darling, A. E., Chowdury, P., & Djordjevic, S. P. (2019) · Microbial Genomics · doi:10.1099/mgen.0.000255 · Cited by 27

Tackling antimicrobial resistance in lower urinary tract infections: treatment options

Pitout, J. D. D., Chan, W. W. M., & Church, D. L. (2016) · Expert Review of Anti-infective Therapy · doi:10.1080/14787210.2016.1188004 · Cited by 23

High Prevalence of CTX-M Type Extended-Spectrum Beta-Lactamase Genes and Detection of NDM-1 Carbapenemase Gene in Extraintestinal Pathogenic Escherichia coli in Cuba

Quiñones, D., Aung, M. S., Cartaya, Y. C., Molina, M. K. G., Novales, N. P., Hidalgo, M., Rivero, M., Zayas, A., del Campo, R., Urushibara, N., et al. (2020) · Pathogens · doi:10.3390/pathogens9010065 · Cited by 22

Whole-genome analyses of extended-spectrum or AmpC β-lactamase-producing Escherichia coli isolates from companion dogs in Japan

Yasugi, M., Hatoya, S., Motooka, D., Matsumoto, Y., SHIMAMURA, S., Tani, H., Furuya, M., Mie, K., Miyake, M., Nakamura, S., et al. (2021) · PLoS ONE · doi:10.1371/journal.pone.0246482 · Cited by 22

Differential Afa/Dr Fimbriae Expression in the Multidrug-Resistant Escherichia coli ST131 Clone

Álvarez-Fraga, L., Phan, M., Goh, K. G. K., Nhu, N. T. K., Hancock, S. J., Allsopp, L. P., Peters, K. M., Forde, B. M., Roberts, L. W., Sullivan, M. J., et al. (2022) · mBio · doi:10.1128/mbio.03519-21 · Cited by 22

Extraintestinal Pathogenic Escherichia coli: Beta-Lactam Antibiotic and Heavy Metal Resistance

Longhi, C., Maurizi, L., Conte, A. L., Marazzato, M., Comanducci, A., Nicoletti, M., & Zagaglia, C. (2022) · Antibiotics · doi:10.3390/antibiotics11030328 · Cited by 23

Uropathogenic Escherichia coli population structure and antimicrobial susceptibility in Norfolk, UK

Carter, C., Hutchison, A., Rudder, S. J., Trotter, E., Waters, E. V., Elumogo, N., & Langridge, G. C. (2023) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkad201 · Cited by 21

Fecal Carriage and Whole-Genome Sequencing-Assisted Characterization of CMY-2 Beta-Lactamase-Producing Escherichia coli in Calves at Czech Dairy Cow Farm

Manga, I., Hasman, H., Šmídková, J., Medvecký, M., Dolejská, M., & Čížek, A. (2019) · Foodborne Pathogens and Disease · doi:10.1089/fpd.2018.2531 · Cited by 22

Epidemiology and genotypic characterisation of dissemination patterns of uropathogenicEscherichia coliin a community

Matsukawa, M., Igarashi, M., Watanabe, H., Qin, L., Ohnishi, M., Terajima, J., Iyoda, S., Morita‐Ishihara, T., Tateda, K., Ishii, Y., et al. (2019) · Epidemiology and Infection · doi:10.1017/s0950268819000426 · Cited by 22

Carriage and population genetics of extended spectrum β-lactamase-producing Escherichia coli in cats and dogs in New Zealand

Karkaba, A., Hill, K., Benschop, J., Pleydell, E. J., & Grinberg, A. (2019) · Veterinary Microbiology · doi:10.1016/j.vetmic.2019.04.015 · Cited by 22

Escherichia coli sequence type 73 as a cause of community acquired urinary tract infection in men and women in Rio de Janeiro, Brazil

da-Silva, A. P. D. S., de Sousa, V. S., Martins, N., Dias, R. C. D. S., Bonelli, R. R., Riley, L. W., & Moreira, B. M. (2017) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2017.01.024 · Cited by 22

Genomic epidemiology reveals geographical clustering of multidrug-resistant Escherichia coli ST131 associated with bacteraemia in Wales

White, R. T., Bull, M. J., Barker, C. R., Arnott, J. M., Wootton, M., Jones, L. S., Howe, R. A., Morgan, M., Ashcroft, M. M., Forde, B. M., et al. (2024) · Nature Communications · doi:10.1038/s41467-024-45608-1 · Cited by 22

Whole genome sequencing, molecular typing and in vivo virulence of OXA-48-producing Escherichia coli isolates including ST131 H30-Rx, H22 and H41 subclones

de Toro, M., Fernández, J., García, V., Mora, A., Blanco, J., de la Cruz, F., & Rodicio, M. R. (2017) · Scientific Reports · doi:10.1038/s41598-017-12015-0 · Cited by 21

Assessment of listing and categorisation of animal diseases within the framework of the Animal Health Law (Regulation (EU) No 2016/429): antimicrobial‐resistant Escherichia coli in dogs and cats, horses, swine, poultry, cattle, sheep and goats

(AHAW), E. P. O. A. H. A. W., Nielsen, S. S., Bicout, D., Calistri, P., Canali, E., Drewe, J. A., Garin‐Bastuji, B., Gonzáles, J. L., Gortázar, C., Herskin, M. S., et al. (2022) · EFSA Journal · doi:10.2903/j.efsa.2022.7311 · Cited by 25

Occurrence of High-Risk Clonal Lineages ST58, ST69, ST224, and ST410 among Extended-Spectrum β-Lactamase-Producing Escherichia coli Isolated from Healthy Free-Range Chickens (Gallus gallus domesticus) in a Rural Region in Tunisia

Benlabidi, S., Raddaoui, A., Lengliz, S., Cheriet, S., Hynds, P. D., Achour, W., Ghrairi, T., & Abbassi, M. S. (2023) · Genes · doi:10.3390/genes14040875 · Cited by 25

Comparison of the microbiological characteristics and virulence factors of ST131 and non-ST131 clones among extended-spectrum β-lactamase–producing Escherichia coli causing bacteremia

Cha, M. K., Kang, C., Ys, K., Cho, S. Y., Ha, Y. E., Wi, Y. M., Chung, D. R., Peck, K. R., & Song, J. (2015) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2015.10.015 · Cited by 21

Population structure of Japanese extraintestinal pathogenic Escherichia coli and its relationship with antimicrobial resistance

Matsumura, Y., Noguchi, T., Tanaka, M., Kanahashi, T., Yamamoto, M., Nagao, M., Takakura, S., Ichiyama, S., & BRG, O. B. O. T. 8. J. (2017) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkw530 · Cited by 22

Characteristics of fosA-carrying plasmids in E. coli and Klebsiella spp. isolates originating from food and environmental samples

Biggel, M., Zurfluh, K., Treier, A., Nüesch‐Inderbinen, M., & Stephan, R. (2021) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkab119 · Cited by 21

Molecular Epidemiology and Presence of Hybrid Pathogenic Escherichia coli among Isolates from Community-Acquired Urinary Tract Infection

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