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New human and mouse microRNA genes found by homology search

Weber, Michel J.·2005·The FEBS Journal

Abstract

Conservation of microRNAs (miRNAs) among species suggests that they bear conserved biological functions. However, sequencing of new miRNAs has not always been accompanied by a search for orthologues in other species. I report herein the results of a systematic search for interspecies orthologues of miRNA precursors, leading to the identification of 35 human and 45 mouse new putative miRNA genes. MicroRNA tracks were written to visualize miRNAs in human and mouse genomes on the UCSC Genome Browser. Based on their localization, miRNA precursors can be excised either from introns or exons of mRNAs. When intronic miRNAs are antisense to the apparent host gene, they appear to originate from ill‐characterized antisense transcription units. Exonic miRNAs are, in general, nonprotein‐coding, poorly conserved genes in sense orientation. In three cases, the excision of an miRNA from a protein‐coding mRNA might lead to the degradation of the rest of the transcript. Moreover, three new examples of miRNAs fully complementary to an mRNA are reported. Among these, miR135a might control the stability and/or translation of an alternative form of the glycerate kinase mRNA by RNA interference. I also discuss the presence of human miRNAs in introns of paralogous genes and in miRNA clusters.

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Metadata

Authors
Weber, M. J.
Venue
The FEBS Journal
Publisher
Wiley
Published
2004-12-02
Volume
272
Issue
1
Pages
59-73
ISSN
  • 1742-464X (ISSN-L)
  • 1742-4658
OpenAlex
W1491989688
Cited by
310
References
7
FWCI
6.86
Type
journal article
Language
en
Open access
closed

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CoChat. (2026). Citation check: New human and mouse microRNA genes found by homology search. https://app.cochat.ai/papers/10.1111/j.1432-1033.2004.04389.x
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Weber, M. J. (2005). New human and mouse microRNA genes found by homology search. The FEBS Journal. https://doi.org/10.1111/j.1432-1033.2004.04389.x

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