CoChat
Sign Up
Cited by 3,950

The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.

miRBase: microRNA sequences, targets and gene nomenclature

Griffiths-Jones, S.·2006·Nucleic Acids Research
DOI 10.1093/nar/gkj112PMC PMC1347474
Open this paper in CoChat — free account

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1093/nar/gkj112

Cites

2 of 2 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 25

  1. [1]Bartel D.P. MicroRNAs: genomics, biogenesis, mechanism, and function Cell 2004 116 281 297 14744438
  2. [2]Filipowicz W. Jaskiewicz L. Kolb F.A. Pillai R.S. Post-transcriptional gene silencing by siRNAs and miRNAs Curr. Opin. Struct. Biol. 2005 15 331 341 15925505
  3. [3]Sontheimer E.J. Carthew R.W. Silence from within: endogenous siRNAs and miRNAs Cell 2005 122 9 12 16009127
  4. [5]Kidner C.A. Martienssen R.A. The developmental role of microRNA in plants Curr. Opin. Plant Biol. 2005 8 38 44 15653398
  5. [6]He L. Thomson J.M. Hemann M.T. Hernando-Monge E. Mu D. Goodson S. Powers S. Cordon-Cardo C. Lowe S.W. Hannon G.J. Hammond S.M. A microRNA polycistron as a potential human oncogene Nature 2005 435 828 833 15944707 PMC4599349
  6. [7]Lu J. Getz G. Miska E.A. Alvarez-Saavedra E. Lamb J. Peck D. Sweet-Cordero A. Ebert B.L. Mak R.H. Ferrando A.A. MicroRNA expression profiles classify human cancers Nature 2005 435 834 838 15944708
  7. [8]O'Donnell K.A. Wentzel E.A. Zeller K.I. Dang C.V. Mendell J.T. c-Myc-regulated microRNAs modulate E2F1 expression Nature 2005 435 839 843 15944709
  8. [9]Kim V.N. MicroRNA biogenesis: coordinated cropping and dicing Nature Rev. Mol. Cell Biol. 2005 6 376 385 15852042
  9. [10]Pasquinelli A.E. Ruvkun G. Control of developmental timing by microRNAs and their targets Annu. Rev. Cell Dev. Biol. 2002 18 495 513 12142272
  10. [11]Griffiths-Jones S. The microRNA Registry Nucleic Acids Res. 2004 32 D109 D111 14681370 PMC308757
  11. [12]Lagos-Quintana M. Rauhut R. Lendeckel W. Tuschl T. Identification of novel genes coding for small expressed RNAs Science 2001 294 853 858 11679670
  12. [13]Lau N.C. Lim L.P. Weinstein E.G. Bartel D.P. An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans Science 2001 294 858 862 11679671
  13. [14]Lee R.C. Ambros V. An extensive class of small RNAs in Caenorhabditis elegans Science 2001 294 862 864 11679672
  14. [15]Ambros V. Bartel B. Bartel D.P. Burge C.B. Carrington J.C. Chen X. Dreyfuss G. Eddy S.R. Griffiths-Jones S. Marshall M. A uniform system for microRNA annotation RNA 2003 9 277 279 12592000 PMC1370393
  15. [16]Lewis B.P. Burge C.B. Bartel D.P. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets Cell 2005 120 15 20 15652477
  16. [17]Rodriguez A. Griffiths-Jones S. Ashurst J.L. Bradley A. Identification of mammalian microRNA host genes and transcription units Genome Res. 2004 14 1902 1910 15364901 PMC524413
  17. [18]Weber M.J. New human and mouse microRNA genes found by homology search FEBS J. 2005 272 59 73 15634332
  18. [19]Hubbard T. Andrews D. Caccamo M. Cameron G. Chen Y. Clamp M. Clarke L. Coates G. Cox T. Cunningham F. Ensembl 2005 Nucleic Acids Res. 2005 33 D447 D453 15608235 PMC540092
  19. [20]Karolchik D. Baertsch R. Diekhans M. Furey T.S. Hinrichs A. Lu Y.T. Roskin K.M. Schwartz M. Sugnet C.W. Thomas D.J. The UCSC Genome Browser Database Nucleic Acids Res. 2003 31 51 54 12519945 PMC165576
  20. [21]Enright A.J. John B. Gaul U. Tuschl T. Sander C. Marks D.S. MicroRNA targets in Drosophila Genome Biol. 2003 5 R1 14709173 PMC395733
  21. [22]Rehmsmeier M. Steffen P. Hochsmann M. Giegerich R. Fast and effective prediction of microRNA/target duplexes RNA 2004 10 1507 1517 15383676 PMC1370637
  22. [23]Stark A. Brennecke J. Russell R.B. Cohen S.M. Identification of Drosophila microRNA targets PLoS Biol 2003 1 E60 14691535 PMC270017
  23. [24]Rajewsky N. Socci N.D. Computational identification of microRNA targets Dev Biol. 2004 267 529 535 15013811
  24. [25]Lewis B.P. Shih I.H. Jones-Rhoades M.W. Bartel D.P. Burge C.B. Prediction of mammalian microRNA targets Cell 2003 115 787 798 14697198
  25. [26]Brennecke J. Stark A. Russell R.B. Cohen S.M. Principles of microRNA–target recognition PLoS Biol. 2005 3 e85 15723116 PMC1043860

Cited by

Sorted by citations

Metadata

Authors
Griffiths-Jones, S.
Venue
Nucleic Acids Research
Publisher
Oxford University Press (OUP)
Published
2006-01-01
Volume
34
Issue
90001
Pages
D140-D144
ISSN
  • 0305-1048
  • 1362-4962
DOI
10.1093/nar/gkj112
PMC
PMC1347474
Cited by
3,950
References
2
Language
en

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review