The Role of GABRA2 in Alcohol Dependence, Smoking, and Illicit Drug Use in an Australian Population Sample
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BACKGROUND: Multiple studies have shown that genetic variation in the alpha-2 subunit of the gamma-aminobutyric acid type A (GABA(A)) receptor (GABRA2) is associated with risk for alcohol dependence. Recent reports have suggested that GABRA2 may exert its influence on dependence through factors such as sensitivity to alcohol's intoxicating effects and that GABRA2 may also contribute to a common underlying genetic vulnerability to both alcohol and drug dependence. The present study tested for association between GABRA2 and alcohol dependence, smoking, and illicit drug use within the Australian population. METHODS: We genotyped 11 single nucleotide polymorphisms (SNPs) within or flanking GABRA2 in 4597 subjects (34.6% males) from 2618 families comprising 814 monozygotic pairs, 1177 dizygotic pairs, and 627 twins whose co-twin did not participate. Family-based association tests were conducted for binary and quantitative measures of alcohol dependence, smoking, and cannabis and other illicit drug use. RESULTS: We observed evidence of association (p < 0.05) between multiple GABRA2 SNPs and quantitative measures of alcohol dependence, including symptom scores and principal component factor scores from the 9 criteria for DSM-IV alcohol dependence, in the opposite direction to that previously reported. In contrast, GABRA2 was not associated overall with dichotomous measure of alcohol dependence nor with smoking, cannabis, or illicit drug use. CONCLUSIONS: The GABRA2 allelic associations found in clinical case-control studies have detectable but minor effects on DSM-defined alcohol dependence in the general community. Systematic comparisons of allelic effects on alcohol dependence in clinical cases and in the general community are required.
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Human genetics studies have noted associations between GABAAR genes and different aspects of alcoholism.
“Human genetics studies have noted associations between GABAAR genes and different aspects of alcoholism [93-98].”
From An emerging circuit pharmacology of GABAA receptors (2018) · cites this paper as [94]
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Cites
Diagnostic and Statistical Manual of Mental Disorders
Williams, J. B. W., & First, M. B. (2013) · Oxford University Press eBooks · doi:10.1093/acrefore/9780199975839.013.104 · Cited by 109,841 · see citing works
Diagnostic and Statistical Manual of Mental Disorders
American Psychiatric Association (2022) · doi:10.1176/appi.books.9780890425787 · Cited by 23,476 · see citing works
Haploview: analysis and visualization of LD and haplotype maps
Barrett, J., Fry, B., Maller, J., & Daly, M. (2005) · Bioinform. · doi:10.1093/bioinformatics/bth457 · Cited by 15,086 · see citing works
Diagnostic and Statistical Manual of Mental Disorders
&NA; (1988) · Alzheimer Disease & Associated Disorders · doi:10.1097/00002093-198802020-00022 · Cited by 12,603 · see citing works
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
The Wellcome Trust Case Control Consortium, Management Committee, Burton, P. R., Clayton, D. G., Cardon, L. R., Craddock, N., Deloukas, P., Duncanson, A., Kwiatkowski, D. P., McCarthy, M. I., et al. (2007) · Nature · doi:10.1038/nature05911 · Cited by 9,442 · see citing works
Diagnostic and Statistical Manual of Mental Disorders, 3rd ed
Cooper, A. M., & Michels, R. (1981) · American Journal of Psychiatry · doi:10.1176/ajp.138.1.128 · Cited by 7,417 · see citing works
Kendler, K. S., Prescott, C. A., Myers, J., & Neale, M. C. (2003) · Archives of General Psychiatry · doi:10.1001/archpsyc.60.9.929 · Cited by 1,868 · see citing works
Bucholz, K. K., Cadoret, R. J., Cloninger, C. R., Dinwiddie, S. H., HESSELBROCK, V. M., Nürnberger, J. I., Reich, T., Schmidt, I., & Schuckit, M. A. (1994) · Journal of Studies on Alcohol · doi:10.15288/jsa.1994.55.149 · Cited by 1,758 · see citing works
Pedigree disequilibrium tests for multilocus haplotypes.
Dudbridge, F. (2003) · Genetic Epidemiology · doi:10.1002/gepi.10252 · Cited by 1,135 · see citing works
A General Test of Association for Quantitative Traits in Nuclear Families
Abecasis, G. R., Cardon, L. R., & Cookson, W. O. C. (2000) · The American Journal of Human Genetics · doi:10.1086/302698 · Cited by 1,126 · see citing works
Saccone, S. F., Hinrichs, A. L., Saccone, N. L., Chase, G. A., Konvicka, K., Madden, P. A. F., Breslau, N., Johnson, E. O., Hatsukami, D., Pomerleau, O., et al. (2007) · Human Molecular Genetics · doi:10.1093/hmg/ddl438 · Cited by 850 · see citing works
Self-citationHeath, A. C., Bucholz, K. K., Madden, P. A. F., Dinwiddie, S. H., Slutske, W. S., Bierut, L. J., Statham, D. J., Dunne, M. P., Whitfield, J. B., & Martin, N. G. (1997) · Psychological Medicine · doi:10.1017/s0033291797005643 · Cited by 846 · see citing works
Self-citationA validity study of the SSAGA‐a comparison with the SCAN
Hesselbrock, M. N., Easton, C. J., Bucholz, K. K., Schuckit, M. A., & HESSELBROCK, V. M. (1999) · Addiction · doi:10.1046/j.1360-0443.1999.94913618.x · Cited by 673 · see citing works
Edenberg, H. J., Dick, D. M., Xuei, X., Tian, H., Almasy, L., Bauer, L. O., Crowe, R. R., Goate, A., Hesselbrock, V., Jones, K., et al. (2004) · The American Journal of Human Genetics · doi:10.1086/383283 · Cited by 655 · see citing works
Novel genes identified in a high-density genome wide association study for nicotine dependence
Bierut, L. J., Madden, P. A. F., Breslau, N., Johnson, E. O., Hatsukami, D., Pomerleau, O. F., Swan, G. E., Rutter, J., Bertelsen, S., Fox, L., et al. (2007) · Human Molecular Genetics · doi:10.1093/hmg/ddl441 · Cited by 622 · see citing works
Self-citationThe role of GABAA receptors in the acute and chronic effects of ethanol
Grobin, A., Matthews, D. B., Devaud, L., & Morrow, A. (1998) · Psychopharmacology · doi:10.1007/s002130050685 · Cited by 498 · see citing works
Common Genetic Vulnerability for Nicotine and Alcohol Dependence in Men
True, W. R., Xian, H., Scherrer, J. F., Madden, P. A. F., Bucholz, K. K., Heath, A. C., Eisen, S. A., Lyons, M. J., Goldberg, J., & Tsuang, M. T. (1999) · Archives of General Psychiatry · doi:10.1001/archpsyc.56.7.655 · Cited by 453 · see citing works
Self-citationEath, A. C. H., Ucholz, K. K. B., Adden, P. A. F. M., Inwiddie, S. H. D., Lutske, W. S. S., Ierut, L. J. B., Tatham, D. J. S., Hitfield, J. B. W., & Artin, N. G. M. (1997) · Cited by 423 · see citing works
PEDSTATS: descriptive statistics, graphics and quality assessment for gene mapping data
Wigginton, J. E., & Abecasis, G. R. (2005) · Computer applications in the biosciences · doi:10.1093/bioinformatics/bti529 · Cited by 408 · see citing works
The role of GABAA receptors in mediating the effects of alcohol in the central nervous system.
Davies, M. (2003) · PubMed Central · Cited by 301 · see citing works
Pedigree tests of transmission disequilibrium
Abecasis, G. R., Cookson, W., & Cardon, L. R. (2000) · European Journal of Human Genetics · doi:10.1038/sj.ejhg.5200494 · Cited by 294 · see citing works
Allelic and haplotypic association of <i>GABRA2</i> with alcohol dependence
Covault, J., Gelernter, J., Hesselbrock, V., Nellissery, M., & Kranzler, H. R. (2004) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.30091 · Cited by 273 · cited 13× · see citing works
“(2005) where individuals carrying G alleles were less sensitive to the effect of alcohol and hence more likely to become alcohol dependent and in 3 studies where the G allele was significantly over-represented among alcoholics (Covault et al., 2004; Fehr et al., 2006; Lappalainen et al., 2005).”
BackgroundMethodResultInfluentialThe role of GABAA receptors in the development of alcoholism
Enoch, M. (2008) · Pharmacology Biochemistry and Behavior · doi:10.1016/j.pbb.2008.03.007 · Cited by 236 · see citing works
Dick, D. M., Bierut, L., Hinrichs, A., Fox, L., Bucholz, K. K., Kramer, J., Kuperman, S., Hesselbrock, V., Schuckit, M., Almasy, L., et al. (2006) · Behavior Genetics · doi:10.1007/s10519-005-9041-8 · Cited by 227 · see citing works
A role for GABA mechanisms in the motivational effects of alcohol
Koob, G. F. (2004) · Biochemical Pharmacology · doi:10.1016/j.bcp.2004.07.031 · Cited by 224 · see citing works
γ-Aminobutyric Acid Type A Receptors and Alcoholism
Krystal, J. H., Staley, J. K., Mason, G. F., Petrakis, I. L., Kaufman, J., Harris, R. A., Gelernter, J. E., & Lappalainen, J. (2006) · Archives of General Psychiatry · doi:10.1001/archpsyc.63.9.957 · Cited by 195 · see citing works
Lappalainen, J., Krupitsky, E. M., Remizov, M., Пчелина, С. Н., Taraskina, A., Zvartau, E. E., Somberg, L. K., Covault, J., Kranzler, H. R., Krystal, J. H., et al. (2005) · Alcoholism Clinical and Experimental Research · doi:10.1097/01.alc.0000158938.97464.90 · Cited by 192 · see citing works
Agrawal, A., Edenberg, H. J., Foroud, T., Bierut, L. J., Dunne, G., Hinrichs, A. L., Nurnberger, J. I., Crowe, R., Kuperman, S., Schuckit, M. A., et al. (2006) · Behavior Genetics · doi:10.1007/s10519-006-9069-4 · Cited by 189 · see citing works
Self-citationWilliams, J. T., Begleiter, H., Porjesz, B., Edenberg, H. J., Foroud, T., Reich, T., Goate, A., Eerdewegh, P. V., Almasy, L. A., & Blangero, J. (1999) · The American Journal of Human Genetics · doi:10.1086/302571 · Cited by 185 · see citing works
Confirmation of association of the GABRA2 gene with alcohol dependence by subtype-specific analysis
Fehr, C., Sander, T., Tadić, A., Lenzen, K. P., Anghelescu, I. G., Klawe, C., Dahmen, N., Schmidt, L. G., & Szegedi, A. (2006) · Psychiatric Genetics · doi:10.1097/01.ypg.0000185027.89816.d9 · Cited by 179 · see citing works
GABA-A2 receptor subunit gene (GABRA2) polymorphisms and risk for alcohol dependence
Soyka, M., Preuss, U. W., HESSELBROCK, V. M., Zill, P., Koller, G., & Bondy, B. (2007) · Journal of Psychiatric Research · doi:10.1016/j.jpsychires.2006.11.006 · Cited by 162 · see citing works
GABRA2 Alleles Moderate the Subjective Effects of Alcohol, Which are Attenuated by Finasteride
Pierucci‐Lagha, A., Covault, J., Feinn, R., Nellissery, M. J., Hernández–Ávila, C. A., Oncken, C. A., Morrow, A. L., & Kranzler, H. R. (2005) · Neuropsychopharmacology · doi:10.1038/sj.npp.1300688 · Cited by 146 · see citing works
Linkage and linkage disequilibrium mapping of ERP and EEG phenotypes
Bernice Porjesz, A., Begleiter, H., Wang, K., Almasy, L. A., Chorlian, D. B., Stimus, A. T., Samuel Kuperman, C., O’Connor, S., Rohrbaugh, J., Bauer, L. O., et al. (2002) · Biological Psychology · doi:10.1016/s0301-0511(02)00060-1 · Cited by 109 · see citing works
A twin study of psychomotor and physiological responses to an acute dose of alcohol
Martin, N. G., Oakeshott, J. G., Gibson, J. B., Starmer, G. A., Perl, J., & Wilks, A. V. (1985) · Behavior Genetics · doi:10.1007/bf01070893 · Cited by 108 · see citing works
Self-citationDimensional anxiety mediates linkage of GABRA2 haplotypes with alcoholism
Enoch, M., Schwartz, L., Albaugh, B., Virkkunen, M. E., & Goldman, D. A. (2006) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.30336 · Cited by 107 · see citing works
Whitfield, J. B., Pang, D., Bucholz, K. K., Madden, P. A. F., Heath, A. C., Statham, D. J., & Martin, N. G. (2000) · Psychological Medicine · doi:10.1017/s0033291799001798 · Cited by 103 · see citing works
Self-citationCovault, J., Gelernter, J. E., Jensen, K. P., Anton, R. F., & Kranzler, H. R. (2007) · Neuropsychopharmacology · doi:10.1038/sj.npp.1301456 · Cited by 92 · see citing works
Drgon, T., D'Addario, C., & Uhl, G. R. (2006) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.30349 · Cited by 82 · see citing works
Variation in <i>GABRA2</i> Predicts Drinking Behavior in Project MATCH Subjects
Bauer, L. O., Covault, J., Harel, O., Das, S., Gelernter, J., Anton, R., & Kranzler, H. R. (2007) · Alcoholism: Clinical and Experimental Research · doi:10.1111/j.1530-0277.2007.00517.x · Cited by 81 · see citing works
Power and Efficiency of the TDT and Case-Control Design for Association Scans
McGinnis, R. E., Shifman, S., & Darvasi, A. (2002) · Behavior Genetics · doi:10.1023/a:1015205924326 · Cited by 72 · see citing works
Smoking and the genetic contribution to alcohol-dependence risk.
Madden, P. A. F., Bucholz, K. K., Martin, N. G., & Heath, A. C. (2000) · Europe PMC (PubMed Central) · Cited by 68 · see citing works
Self-citationHaughey, H. M., Ray, L. A., Finan, P. H., Villanueva, R. E., Niculescu, M., & Hutchison, K. E. (2007) · Genes Brain & Behavior · doi:10.1111/j.1601-183x.2007.00369.x · Cited by 58 · see citing works
Agrawal, A., Pergadia, M. L., Saccone, S. F., Hinrichs, A. L., Lessov‐Schlaggar, C. N., Saccone, N. L., Neuman, R. J., Breslau, N., Johnson, E., Hatsukami, D., et al. (2008) · Addiction · doi:10.1111/j.1360-0443.2008.02236.x · Cited by 56 · see citing works
Self-citationOn the probability of dizygotic twins being concordant for two alleles at multiple polymorphic loci.
Nyholt, D. (2006) · Twin Research and Human Genetics · doi:10.1375/183242706776382383 · Cited by 52 · see citing works
Matthews, A. G., Hoffman, E. K., Zezza, N., Stiffler, S., & Hill, S. Y. (2007) · Journal of Studies on Alcohol and Drugs · doi:10.15288/jsad.2007.68.625 · Cited by 49 · see citing works
On the Probability of Dizygotic Twins Being Concordant for Two Alleles at Multiple Polymorphic Loci
Nyholt, D. R. (2006) · Twin Research and Human Genetics · doi:10.1375/twin.9.2.194 · Cited by 43 · see citing works
Behavioral phenotypes: Conceptual and methodological issues
Flint, J. (1998) · American Journal of Medical Genetics · doi:10.1002/(sici)1096-8628(19980508)81:3 · Cited by 28 · see citing works
Lind, P. A., MacGregor, S., Montgomery, G. W., Heath, A. C., Martin, N. G., & Whitfield, J. B. (2008) · Twin Research and Human Genetics · doi:10.1375/twin.11.2.174 · Cited by 22 · see citing works
Self-citationssSNPer: identifying statistically similar SNPs to aid interpretation of genetic association studies
Nyholt, D. R. (2006) · Bioinformatics · doi:10.1093/bioinformatics/btl518 · Cited by 19 · see citing works
Buck, K. J., & Reynolds, J. N. (1996) · Alcoholism Clinical and Experimental Research · doi:10.1111/j.1530-0277.1996.tb01776.x · Cited by 18 · see citing works
Power Evaluations for Family-Based Tests of Association With Incomplete Parental Genotypes
Yang, Q., Xu, X. P., & Laird, N. M. (2003) · Genetics · doi:10.1093/genetics/164.1.399 · Cited by 5 · see citing works
Young (2000) · doi:10.1002/1096-8628(20001009)96:5
Flagged first, then by citations
Research works printed but not linked: 1
- Reich T Edenberg HJ Goate A Williams JT Rice JP Van Eerdewegh P Foroud T Hesselbrock V Schuckit MA Bucholz K Porjesz B Li TK Conneally PM Nurnberger JI Jr. Tischfield JA Crowe RR Cloninger CR Wu W Shears S Carr K Crose C Willig C Begleiter H Genome-wide search for genes affecting the risk for alcohol dependence. Am J Med Genet 1998 81 207 215 9603606
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Li, D., Sulovari, A., Cheng, C., Zhao, H., Kranzler, H. R., & Gelernter, J. (2014) · Neuropsychopharmacology · doi:10.1038/npp.2013.291 · Cited by 103 · see citing works
Xuei, X., Flury‐Wetherill, L., Dick, D., Goate, A., Tischfield, J., Nurnberger, J., Schuckit, M., Kramer, J., Kuperman, S., Hesselbrock, V., et al. (2010) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.30995 · Cited by 47 · see citing works
Villafuerte, S., Trucco, E. M., Heitzeg, M. M., Burmeister, M., & Zucker, R. A. (2014) · Brain and Behavior · doi:10.1002/brb3.291 · Cited by 22 · see citing works
- Authors
- Lind, P. A., Macgregor, S., Agrawal, A., Montgomery, G. W., Heath, A. C., Martin, N. G., & Whitfield, J. B.
- Affiliations
- Washington University in St. Louis (US)
- Corresponding author
- Lind, Penelope A.
- ORCID
- Venue
- Alcoholism Clinical and Experimental Research
- Publisher
- Wiley
- Published
- 2008-09-17
- Volume
- 32
- Issue
- 10
- Pages
- 1721-1731
- ISSN
- 0145-6008 (ISSN-L)
- 1530-0277
- PMC
- PMC2575093
- OpenAlex
- W2090407373
- Cited by
- 55
- References
- 52
- Citations by year
- 2023: 2 · 2022: 2 · 2021: 1 · 2019: 2 · 2018: 4 · 2017: 5 · 2016: 3 · 2015: 4 · 2014: 8 · 2013: 3 · 2012: 8
- FWCI
- 2.48
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Alcoholism Clinical and Experimental Research (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Wellcome Trust
- National Institute on Alcohol Abuse and Alcoholism (R37AA007728, AA013326, AA 007728, R01AA013321, R01AA007728, AA-014041, R01AA013326, AA013321, R01AA014041, R01AA007535)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
- Health Sciences › Medicine › Epidemiology › Substance Abuse Treatment and Outcomes
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neurotransmitter Receptor Influence on Behavior
- Keywords
- GABRA2, alcoholism, smoking, illicit drug use, cannabis use, single nucleotide polymorphisms, genetic association, family-based association, twin and family studies, general population
- MeSH terms
- Adult, Aged, Aged, 80 and over, Alcoholism, Australia, Marijuana Abuse, Female, Haplotypes, Humans, Male, Middle Aged, Receptors, GABA-A, Smoking, Survival Analysis, Polymorphism, Single Nucleotide, White People
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