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Indole as an intercellular signal in microbial communities
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Bacteria can utilize signal molecules to coordinate their behavior to survive in dynamic multispecies communities. Indole is widespread in the natural environment, as a variety of both Gram-positive and Gram-negative bacteria (to date, 85 species) produce large quantities of indole. Although it has been known for over 100 years that many bacteria produce indole, the real biological roles of this molecule are only now beginning to be unveiled. As an intercellular signal molecule, indole controls diverse aspects of bacterial physiology, such as spore formation, plasmid stability, drug resistance, biofilm formation, and virulence in indole-producing bacteria. In contrast, many non-indole-producing bacteria, plants and animals produce diverse oxygenases which may interfere with indole signaling. It appears indole plays an important role in bacterial physiology, ecological balance, and possibly human health. Here we discuss our current knowledge and perspectives on indole signaling.
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“Several bacterial taxa can also affect tryptophan levels by direct utilization for growth or via tryptophanase expression (28, 203, 204)”
From Signalling cognition: The gut microbiota and hypothalamic-pituitary-adrenal axis (2023) · cites this paper as [203]
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Cites
QUORUM SENSING: Cell-to-Cell Communication in Bacteria
Waters, C. M., & Bassler, B. L. (2005) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev.cellbio.21.012704.131001 · Cited by 3,989
Fuqua, W. C., Winans, S. C., & Greenberg, E. P. (1994) · Journal of Bacteriology · doi:10.1128/jb.176.2.269-275.1994 · Cited by 2,941
Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites
Wikoff, W. R., Anfora, A. T., Liu, J., Schultz, P. G., Lesley, S. A., Peters, E. C., & Siuzdak, G. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0812874106 · Cited by 2,677
Commensal Host-Bacterial Relationships in the Gut
Hooper, L. V., & Gordon, J. I. (2001) · Science · doi:10.1126/science.1058709 · Cited by 2,362
Attenuation of Pseudomonas aeruginosa virulence by quorum sensing inhibitors
Hentzer, M., Wu, H., Andersen, J. B., Riedel, K., Rasmussen, T. B., Bagge, N., Kumar, N., Schembri, M. A., Song, Z., Kristoffersen, P., et al. (2003) · The EMBO Journal · doi:10.1093/emboj/cdg366 · Cited by 1,440
Microbes in Gastrointestinal Health and Disease
Neish, A. S. (2008) · Gastroenterology · doi:10.1053/j.gastro.2008.10.080 · Cited by 1,423
Schuster, M., Lostroh, P., Ogi, T., & Greenberg, E. P. (2003) · Journal of Bacteriology · doi:10.1128/jb.185.7.2066-2079.2003 · Cited by 1,127
Hentzer, M., Riedel, K., Rasmussen, T. B., Heydorn, A., Andersen, J. B., Parsek, M. R., Rice, S. A., Eberl, L., Molin, S., Høiby, N., et al. (2002) · Microbiology · doi:10.1099/00221287-148-1-87 · Cited by 1,053
How bacteria talk to each other: regulation of gene expression by quorum sensing
Bassler, B. L. (1999) · Current Opinion in Microbiology · doi:10.1016/s1369-5274(99)00025-9 · Cited by 1,046
Cruciferous vegetables and human cancer risk: epidemiologic evidence and mechanistic basis
Higdon, J. V., Delage, B., WILLIAMS, D., & Dashwood, R. H. (2007) · Pharmacological Research · doi:10.1016/j.phrs.2007.01.009 · Cited by 1,038
Research works printed but not linked: 1
- Pittard AJ (1996) Biosynthesis of the aromatic amino acids: the tryptophan pathway. Escherichia coli and Salmonella: Cellular and Molecular Biology ( Neidhardt FC , ed), pp. 458–484. ASM Press, Washington, DC.
Cited by
Sorted by citations
Items 101–200 of 1,000
Létoffé, S., Audrain, B., Bernier, S. P., Delepierre, M., & Ghigo, J. (2014) · mBio · doi:10.1128/mbio.00944-13 · Cited by 129
Small-Molecule Inhibition of Bacterial Biofilm
Ghosh, A., Jayaraman, N., & Chatterji, D. (2020) · ACS Omega · doi:10.1021/acsomega.9b03695 · Cited by 126
Chung, J.-H., Song, G. C., & Ryu, C. (2015) · Plant Molecular Biology · doi:10.1007/s11103-015-0344-8 · Cited by 129
Indole Affects Biofilm Formation in Bacteria
Hu, M., Zhang, C., Mu, Y., Shen, Q., & Feng, Y. (2010) · Indian Journal of Microbiology · doi:10.1007/s12088-011-0142-1 · Cited by 122
Environmental factors affecting indole production in Escherichia coli
Han, T. H., Lee, J.-H., Cho, M. H., Wood, T. K., & Lee, J. (2010) · Research in Microbiology · doi:10.1016/j.resmic.2010.11.005 · Cited by 121
Gryp, T., Huys, G. R. B., Joossens, M., Biesen, W. V., Glorieux, G., & Vaneechoutte, M. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21061986 · Cited by 124
Indoles as essential mediators in the gut-brain axis. Their role in Alzheimer's disease
Pappolla, M. A., Perry, G. L., Fang, X., Zagorski, M. G., Sambamurti, K., & Pöeggeler, B. (2021) · Neurobiology of Disease · doi:10.1016/j.nbd.2021.105403 · Cited by 124
Wu, R., Xiong, R., Li, Y., Chen, J., & Yan, R. (2023) · Journal of Autoimmunity · doi:10.1016/j.jaut.2023.103062 · Cited by 124
Amavizca, E., Bashan, Y., Ryu, C.-M., Farag, M. A., Bebout, B. M., & de-Bashan, L. E. (2017) · Scientific Reports · doi:10.1038/srep41310 · Cited by 119
Masse, K. E., & Lu, V. B. (2023) · Frontiers in Endocrinology · doi:10.3389/fendo.2023.1169624 · Cited by 120
“More than 85 different Gram-positive and Gram-negative bacterial species express tryptophanase (67), the enzyme that catalyzes the hydrolytic b-elimination of tryptophan to indole, pyruvate, and ammonia (68).”
BackgroundIndole and 7-benzyloxyindole attenuate the virulence of Staphylococcus aureus
Lee, J., Cho, H. S., Kim, J., Kim, J.-A., Banskota, S., Cho, M. H., & Lee, J. (2013) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-012-4674-z · Cited by 116
Volatiles in Inter-Specific Bacterial Interactions
Tyc, O., Zweers, H., de Boer, W., & Garbeva, P. (2015) · Frontiers in Microbiology · doi:10.3389/fmicb.2015.01412 · Cited by 115
Gilbert, S., Xu, J., Acosta, K., Poulev, A., Lebeis, S. L., & Lam, E. (2018) · Frontiers in Chemistry · doi:10.3389/fchem.2018.00265 · Cited by 115
Bacterial Volatile Compounds: Functions in Communication, Cooperation, and Competition
Netzker, T., Shepherdson, E. M. F., Zambri, M. P., & Elliot, M. A. (2020) · Annual Review of Microbiology · doi:10.1146/annurev-micro-011320-015542 · Cited by 115
KUWAHARA, A., MATSUDA, K., KUWAHARA, Y., ASANO, S., INUI, T., & MARUNAKA, Y. (2020) · Biomedical Research · doi:10.2220/biomedres.41.199 · Cited by 112
The Microbiome and Hematopoietic Cell Transplantation: Past, Present, and Future
Andermann, T. M., Peled, J. U., Ho, C. M., Reddy, P. R., Riches, M., Storb, R. F., Teshima, T., van den Brink, M. R. M., Alousi, A. M., Balderman, S., et al. (2018) · Transplantation and Cellular Therapy · doi:10.1016/j.bbmt.2018.02.009 · Cited by 113
Rethinking Diet to Aid Human–Microbe Symbiosis
Derrien, M., & Veiga, P. (2016) · Trends in Microbiology · doi:10.1016/j.tim.2016.09.011 · Cited by 118
Greathouse, K. L., & Wyatt, M. (2021) · Nutrients · doi:10.3390/nu13041189 · Cited by 116
Diverse roles of microbial indole compounds in eukaryotic systems
Kumar, P., Lee, J., & Lee, J. (2021) · Biological reviews/Biological reviews of the Cambridge Philosophical Society · doi:10.1111/brv.12765 · Cited by 114
Efflux pumps and microbial biofilm formation
Hajiagha, M. N., & Kafil, H. S. (2023) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2023.105459 · Cited by 111
Aunins, T. R., Erickson, K. E., Prasad, N., Levy, S., Jones, A., Shrestha, S., Mastracchio, R., Stodieck, L., Klaus, D. M., Zea, L., et al. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.00310 · Cited by 110
Bovine host genome acts on rumen microbiome function linked to methane emissions
Martínez-Álvaro, M., Auffret, M. D., Duthie, C.-A., Dewhurst, R. J., Cleveland, M. A., Watson, M., & Roehe, R. (2022) · Communications Biology · doi:10.1038/s42003-022-03293-0 · Cited by 122
Indole Transport across Escherichia coli Membranes
Piñero-Fernández, S., Chimerel, C., Keyser, U. F., & Summers, D. (2011) · Journal of Bacteriology · doi:10.1128/jb.01477-10 · Cited by 110
Microbiota–Host Transgenomic Metabolism, Bioactive Molecules from the Inside
Turroni, S., Brigidi, P., Cavalli, A., & Candela, M. (2017) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.7b00244 · Cited by 111
The Microbiota and the Gut–Brain Axis in Controlling Food Intake and Energy Homeostasis
Romaní‐Pérez, M., Bullich‐Vilarrubias, C., López‐Almela, I., Liébana-García, R., Olivares, M., & Sanz, Y. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22115830 · Cited by 117
Mishima, E., Fukuda, S., Kanemitsu, Y., Saigusa, D., Mukawa, C., Asaji, K., Matsumoto, Y., Tsukamoto, H., Tachikawa, T., Tsukimi, T., et al. (2017) · American Journal of Physiology-Renal Physiology · doi:10.1152/ajprenal.00314.2017 · Cited by 106
Huć, T., Nowiński, A., Drapała, A., Konopelski, P., & Ufnal, M. (2017) · Pharmacological Research · doi:10.1016/j.phrs.2017.12.025 · Cited by 105
Volatile Compounds of Bacterial Origin: Structure, Biosynthesis, and Biological Activity
Веселова, М. А., Александрович, П. В., & Khmel, I. A. (2019) · Microbiology · doi:10.1134/s0026261719030160 · Cited by 110
Halogenated indoles eradicate bacterial persister cells and biofilms
Lee, J., Kim, Y., Gwon, G., Wood, T. K., & Lee, J. (2016) · AMB Express · doi:10.1186/s13568-016-0297-6 · Cited by 106
Toxin YafQ increases persister cell formation by reducing indole signalling
Hu, Y. J., Kwan, B. W., Osbourne, D. O., Benedik, M. J., & Wood, T. K. (2014) · Environmental Microbiology · doi:10.1111/1462-2920.12567 · Cited by 104
Origin of plant auxin biosynthesis
Yue, J., Hu, X., & Huang, J. (2014) · Trends in Plant Science · doi:10.1016/j.tplants.2014.07.004 · Cited by 103
Genome engineering for improved recombinant protein expression in Escherichia coli
Mahalik, S., Sharma, A. K., & Mukherjee, K. J. (2014) · Microbial Cell Factories · doi:10.1186/s12934-014-0177-1 · Cited by 109
Local and Universal Action: The Paradoxes of Indole Signalling in Bacteria
Zarkan, A., Liu, J., Matuszewska, M., Gaimster, H., & Summers, D. (2020) · Trends in Microbiology · doi:10.1016/j.tim.2020.02.007 · Cited by 104
Lukić, I., Getselter, D., Koren, O., & Elliott, E. (2019) · Frontiers in Behavioral Neuroscience · doi:10.3389/fnbeh.2019.00123 · Cited by 102
Tryptophan metabolites in depression: Modulation by gut microbiota
Lukić, I., Ivković, S., Mitić, M., & Adžić, M. (2022) · Frontiers in Behavioral Neuroscience · doi:10.3389/fnbeh.2022.987697 · Cited by 113
A Family of Indoles Regulate Virulence and Shiga Toxin Production in Pathogenic E. coli
Bommarius, B., Anyanful, A., Izrayelit, Y., Bhatt, S., Cartwright, E. J., Wang, W., Swimm, A. I., Benian, G. M., Schroeder, F. C., & Kalman, D. (2013) · PLoS ONE · doi:10.1371/journal.pone.0054456 · Cited by 99
Borrego-Ruiz, A., & Borrego, J. J. (2023) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2023.110861 · Cited by 111
Vlachos, C., Schulte, B. M., Magiatis, P., Adema, G. J., & Gaitanis, G. (2012) · British Journal of Dermatology · doi:10.1111/j.1365-2133.2012.11014.x · Cited by 96
7-fluoroindole as an antivirulence compound against Pseudomonas aeruginosa
Lee, J., Kim, Y., Cho, M. H., Kim, J., & Lee, J. (2012) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.2012.02500.x · Cited by 98
Exploiting rhizosphere microbial cooperation for developing sustainable agriculture strategies
Besset-Manzoni, Y., Rieusset, L., Joly, P., Comte, G., & Prigent‐Combaret, C. (2018) · Environmental Science and Pollution Research · doi:10.1007/s11356-017-1152-2 · Cited by 104
Andreozzi, A., Prieto, P., Mercado‐Blanco, J., Monaco, S., Zampieri, E., Romano, S., Valè, G., Defez, R., & Bianco, C. (2019) · Environmental Microbiology · doi:10.1111/1462-2920.14688 · Cited by 95
Modulation of immunity by tryptophan microbial metabolites
Li, S. (2023) · Frontiers in Nutrition · doi:10.3389/fnut.2023.1209613 · Cited by 104
Bacteria of the Genus Xenorhabdus, a Novel Source of Bioactive Compounds
Dreyer, J., Malan, A. P., & Dicks, L. M. T. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.03177 · Cited by 92
Gut-Derived Metabolites and Their Role in Immune Dysfunction in Chronic Kidney Disease
Glorieux, G., Gryp, T., & Perna, A. F. (2020) · Toxins · doi:10.3390/toxins12040245 · Cited by 95
Microbial Degradation of Indole and Its Derivatives
Arora, P., Sharma, A., & Bae, H. (2015) · Journal of Chemistry · doi:10.1155/2015/129159 · Cited by 70
Ghiboub, M., Verburgt, C. M., Sovran, B., Benninga, M. A., de Jonge, W. J., & Limbergen, J. V. (2020) · Nutrients · doi:10.3390/nu12092846 · Cited by 97
Lee, J., Park, J.-H., Kim, J., Neupane, G. P., Cho, M. H., Lee, C., & Lee, J. (2011) · Biofouling · doi:10.1080/08927014.2011.633704 · Cited by 93
Hyland, N. P., Cavanaugh, C. R., & Hornby, P. J. (2022) · Amino Acids · doi:10.1007/s00726-022-03123-x · Cited by 92
Zhang, Y., Xiao, M., Horiyama, T., Zhang, Y., Li, X., Nishino, K., & Yan, A. (2011) · Journal of Biological Chemistry · doi:10.1074/jbc.m111.243261 · Cited by 87
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Chen, Y., Wang, Y., Fu, Y., Yin, Y., & Xu, K. (2023) · Cell & Bioscience · doi:10.1186/s13578-023-01046-y · Cited by 92
Autoxidation Photoredox Catalysis for the Synthesis of 2-Phosphinoylindoles
Wang, C.-H., Li, Y., & Yang, S. (2018) · Organic Letters · doi:10.1021/acs.orglett.8b00722 · Cited by 88
Lemon Exosome-like Nanoparticles-Manipulated Probiotics Protect Mice from C. diff Infection
Lei, C., Mu, J., Teng, Y., He, L., Xu, F., Zhang, X., Sundaram, K., Kumar, A., Sriwastva, M. K., Lawrenz, M. B., et al. (2020) · iScience · doi:10.1016/j.isci.2020.101571 · Cited by 91
Molina‐Santiago, C., Daddaoua, A., Fillet, S., Duque, E., & Ramos, J. L. (2013) · Environmental Microbiology · doi:10.1111/1462-2920.12368 · Cited by 85
The Influence of Nutrition on Intestinal Permeability and the Microbiome in Health and Disease
Inczefi, O., Bacsúr, P., Resál, T., Keresztes, C., & Molnár, T. (2022) · Frontiers in Nutrition · doi:10.3389/fnut.2022.718710 · Cited by 90
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Yin, Q., da Silva, A. C., Zorrilla, F., Almeida, A. S., Patil, K. R., & Almeida, A. (2025) · Nature Microbiology · doi:10.1038/s41564-024-01912-6 · Cited by 89
Sheflin, A. M., Borresen, E. C., Wdowik, M. J., Rao, S., Brown, R. J., Heuberger, A. L., Broeckling, C. D., Weir, T. L., & Ryan, E. P. (2015) · Nutrients · doi:10.3390/nu7021282 · Cited by 89
Goode, O., Smith, A., Zarkan, A., Cama, J., Invergo, B. M., Belgami, D., Muñiz, S. E. C., Metz, J., O’Neill, P., Jeffries, A. R., et al. (2021) · mBio · doi:10.1128/mbio.00909-21 · Cited by 87
Microbiota-derived tryptophan metabolism: Impacts on health, aging, and disease
Gupta, S. K., Vyavahare, S. S., Blanes, I. L. D., Berger, F. G., Isales, C. M., & Fulzele, S. (2023) · Experimental Gerontology · doi:10.1016/j.exger.2023.112319 · Cited by 96
Cheffi, M., Bouket, A. C., Alenezi, F. N., Luptáková, L., Bełka, M., Vallat, A., Rateb, M. E., Tounsi, S., Triki, M. A., & Belbahri, L. (2019) · Microorganisms · doi:10.3390/microorganisms7090314 · Cited by 84
Uremic Toxin-Producing Gut Microbiota in Rats with Chronic Kidney Disease
Kikuchi, M., Ueno, M., Itoh, Y., Suda, W., & Hattori, M. (2017) · Nephron · doi:10.1159/000450619 · Cited by 82
Liu, Y., Pei, Z., Pan, T., Wang, H., Chen, W., & Lu, W. (2023) · Microbiological Research · doi:10.1016/j.micres.2023.127392 · Cited by 88
Chlamydia trachomatis Genital Tract Infections: When Host Immune Response and the Microbiome Collide
Ziklo, N., Huston, W. M., Hocking, J. S., & Timms, P. (2016) · Trends in Microbiology · doi:10.1016/j.tim.2016.05.007 · Cited by 82
Darkoh, C., Plants-Paris, K., Bishoff, D., & DuPont, H. L. (2019) · mSystems · doi:10.1128/msystems.00346-18 · Cited by 85
Genetic engineering of Escherichia coli to enhance production of l-tryptophan
Wang, J., Li-kun, C., Wang, J., Liu, Q., Shen, T., & Chen, N. (2013) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-013-5026-3 · Cited by 80
Impact of Gut Dysbiosis on Neurohormonal Pathways in Chronic Kidney Disease
Jazani, N. H., Savoj, J., Lustgarten, M. S., Lau, W. L., & Vaziri, N. D. (2019) · Diseases · doi:10.3390/diseases7010021 · Cited by 84
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Chappell, C. L., Darkoh, C., Shimmin, L. C., Farhana, N., Kim, D.-K., Okhuysen, P. C., & Hixson, J. E. (2016) · Infection and Immunity · doi:10.1128/iai.00336-16 · Cited by 77
Microbial metabolites in the pathogenesis of periodontal diseases: a narrative review
Basic, A., & Dahlén, G. (2023) · Frontiers in Oral Health · doi:10.3389/froh.2023.1210200 · Cited by 87
Taheri-Araghi, S., Brown, S. D., Sauls, J. T., McIntosh, D. B., & Jun, S. (2015) · Annual Review of Biophysics · doi:10.1146/annurev-biophys-060414-034236 · Cited by 78
Biodegradation of indole by a newly isolated Cupriavidus sp. SHE
Qu, Y., Shen, E., Ma, Q., Zhang, Z., Liu, Z., Shen, W., Wang, J., Li, D., Li, H., & Zhou, J. (2015) · Journal of Environmental Sciences · doi:10.1016/j.jes.2015.01.023 · Cited by 98
Virulence‐targeted Antibacterials: Concept, Promise, and Susceptibility to Resistance Mechanisms
Ruer, S., Pinotsis, N., Steadman, D., Waksman, G., & Remaut, H. K. (2015) · Chemical Biology & Drug Design · doi:10.1111/cbdd.12517 · Cited by 74
Osadchiy, V., Labus, J. S., Gupta, A., Jacobs, J. P., Ashe-McNalley, C., Hsiao, E. Y., & Mayer, E. A. (2018) · PLoS ONE · doi:10.1371/journal.pone.0201772 · Cited by 82
Indoxyl sulphate and kidney disease: Causes, consequences and interventions
Ellis, R. J., Small, D. M., Vesey, D. A., Johnson, D. W., Francis, R. S., Vitetta, L., Gobe, G. C., & Morais, C. (2015) · Nephrology · doi:10.1111/nep.12580 · Cited by 81
Secondary metabolites from plant‐associated Pseudomonas are overproduced in biofilm
Rieusset, L., Rey, M., Muller, D. A. E., Vacheron, J., Gerin, F., Dubost, A., Comte, G., & Prigent‐Combaret, C. (2020) · Microbial Biotechnology · doi:10.1111/1751-7915.13598 · Cited by 74
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Glorieux, G., Nigám, S. K., Vanholder, R. C., & Verbeke, F. (2023) · Circulation Research · doi:10.1161/circresaha.123.321763 · Cited by 80
Zhang, F.-L., Chen, X., Wang, Y.-F., Hu, Z., Zhang, W., Zhou, B., Ci, P.-F., & Liu, K. (2023) · Journal of Translational Medicine · doi:10.1186/s12967-023-04109-3 · Cited by 80
Kirby, A. E., Garner, K., & Levin, B. R. (2012) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.06480-11 · Cited by 72
Cascioferro, S., Parrino, B., Petri, G. L., Cusimano, M. G., Schillaci, D., Sarno, V. D., Musella, S., Giovannetti, E., Cirrincione, G., & Diana, P. (2019) · European Journal of Medicinal Chemistry · doi:10.1016/j.ejmech.2019.02.007 · Cited by 73
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Steinmeyer, S. H., Lee, K., Jayaraman, A., & Alaniz, R. C. (2015) · Current Allergy and Asthma Reports · doi:10.1007/s11882-015-0524-2 · Cited by 73
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Gart, E. V., Suchodolski, J. S., Welsh, T. H., Alaniz, R. C., Randel, R. D., & Lawhon, S. D. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.01827 · Cited by 73
Kohli, N., Crisp, Z., Riordan, R., Li, M., Alaniz, R. C., & Jayaraman, A. (2018) · PLoS ONE · doi:10.1371/journal.pone.0190613 · Cited by 75
Bacterial volatile compound-based tools for crop management and quality
Cellini, A., Spinelli, F., Donati, I., Ryu, C., & Kloepper, J. W. (2021) · Trends in Plant Science · doi:10.1016/j.tplants.2021.05.006 · Cited by 72
Active Efflux Leads to Heterogeneous Dissipation of Proton Motive Force by Protonophores in Bacteria
Dai, L., Krasnopeeva, E., Sinjab, F., Piližota, T., & Kim, M. (2021) · mBio · doi:10.1128/mbio.00676-21 · Cited by 74
Shaw, C. A., Hess, M., & Weimer, B. C. (2022) · Virulence · doi:10.1080/21505594.2022.2127196 · Cited by 76
Antibiofilm and Antivirulence Properties of Indoles Against Serratia marcescens
Sethupathy, S., Sathiyamoorthi, E., Kim, Y., Lee, J., & Lee, J. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.584812 · Cited by 70
Tang, H., Li, P., Chen, L., Ma, J., Guo, H., Huang, X.-C., Zhong, R., Jing, S.-Q., & Jiang, L. (2022) · Food Chemistry · doi:10.1016/j.foodchem.2022.133253 · Cited by 71
Lee, J., Kim, Y., Kim, M., Kim, E., Choi, H., Kim, Y., & Lee, J. (2016) · Environmental Microbiology · doi:10.1111/1462-2920.13649 · Cited by 69
Li, L., Xiong, Q., Zhao, J., Lin, X., He, S., Wu, N., Yao, Y., Liang, W., Zuo, X., & Ying, C. (2019) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/nqz337 · Cited by 70
The Indole Pulse: A New Perspective on Indole Signalling in Escherichia coli
Gaimster, H., Cama, J., Hernández‐Ainsa, S., Keyser, U. F., & Summers, D. (2014) · PLoS ONE · doi:10.1371/journal.pone.0093168 · Cited by 70
Bunders, C. A., Cavanagh, J., & Melander, C. (2011) · Organic & Biomolecular Chemistry · doi:10.1039/c1ob05605k · Cited by 69
Oh, S., Go, G., Mylonakis, E. E., & Kim, Y.-S. (2012) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2012.05372.x · Cited by 71
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Metadata
- Authors
- Lee, J.-H., & Lee, J.
- Affiliations
- Yeungnam University (KR)
- Corresponding author
- Lee, Jintae
- Venue
- FEMS Microbiology Reviews
- Publisher
- Oxford University Press (OUP)
- Published
- 2010-07
- Volume
- 34
- Issue
- 4
- Pages
- 426-444
- ISSN
- 0168-6445 (ISSN-L)
- 1574-6976
- OpenAlex
- W2049821596
- Cited by
- 1,059
- References
- 174
- Citations by year
- 2026: 82 · 2025: 113 · 2024: 94 · 2023: 115 · 2022: 112 · 2021: 99 · 2020: 89 · 2019: 62 · 2018: 61 · 2017: 42 · 2016: 36 · 2015: 44 · 2014: 42 · 2013: 27 · 2012: 17
- FWCI
- 1.02
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- FEMS Microbiology Reviews (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Yeungnam University
- Directorate for Education and Human Resources
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Bacterial biofilms and quorum sensing
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Immunology and Microbiology › Microbiology › Escherichia coli research studies
- Keywords
- intercellular communication, bacterial quorum sensing, microbial communities, sporulation, plasmid stability, drug resistance, biofilm formation, virulence, Gram-positive bacteria, Gram-negative bacteria
- MeSH terms
- Bacteria, Indoles, Plasmids, Virulence, Signal Transduction, Gene Expression Regulation, Bacterial, Bacterial Physiological Phenomena, Biofilms, Drug Resistance, Bacterial, Quorum Sensing
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