The DOI matches its Crossref record; 46 of the 46 references it cites were found in a registry or an index.
RNA-Dependent RNA Polymerases, Viruses, and RNA Silencing
Abstract
Most viruses have RNA genomes that are replicated and transcribed into messenger RNA by viral RNA–dependent RNA polymerases (RdRps), usually in concert with other viral and host factors. Many, if not most, eukaryotes also encode putative RdRps that have been implicated in sequence-specific, RNA-triggered gene silencing. Although the viral and cellular RdRps have no sequence homology, they share functional similarities such as copying messenger RNA templates and intercellular spread of the amplified sequences. Better understanding of viral and host RdRps will improve our ability to control viruses and to use RNA silencing and viruses as tools for research, biotechnology, and medicine.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
Elbashir, S. M., Harborth, J., Lendeckel, W., Yalcin, A., Weber, K., & Tuschl, T. (2001) · Nature · doi:10.1038/35078107 · Cited by 9,456
Argonaute2, a Link Between Genetic and Biochemical Analyses of RNAi
Hammond, S. M., Boettcher, S., Caudy, A. A., Kobayashi, R., & Hannon, G. J. (2001) · Science · doi:10.1126/science.1064023 · Cited by 1,580
Tsg101 and the vacuolar protein sorting pathway are essential for HIV-1 budding
Garrus, J. E., von Schwedler, U. K., Pornillos, O. W., Morham, S. G., Zavitz, K. H., Wang, H. E., Wettstein, D. A., Stray, K. M., Côté, M., Rich, R. L., et al. (2001) · Cell · doi:10.1016/s0092-8674(01)00506-2 · Cited by 1,369
On the Role of RNA Amplification in dsRNA-Triggered Gene Silencing
Sijen, T., Fleenor, J., Simmer, F., Thijssen, K. L., Parrish, S., Timmons, L., Plasterk, R. H. A., & Fire, A. (2001) · Cell · doi:10.1016/s0092-8674(01)00576-1 · Cited by 1,277
Mourrain, P., Béclin, C., Elmayan, T., Feuerbach, F., Godon, C., Morel, J.-B., Jouette, D., Lacombe, A.-M., Nikic, S., Picault, N., et al. (2000) · Cell · doi:10.1016/s0092-8674(00)80863-6 · Cited by 1,095
Dalmay, T., Hamilton, A., Rudd, S., Angell, S., & Baulcombe, D. C. (2000) · Cell · doi:10.1016/s0092-8674(00)80864-8 · Cited by 1,068
Caplen, N. J., Parrish, S., Imani, F., Fire, A., & Morgan, R. A. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.171251798 · Cited by 1,043
ATP Requirements and Small Interfering RNA Structure in the RNA Interference Pathway
Nykänen, A., Haley, B., & Zamore, P. D. (2001) · Cell · doi:10.1016/s0092-8674(01)00547-5 · Cited by 1,016
Gene silencing as an adaptive defence against viruses
Waterhouse, P. M., Wang, M.-B., & Lough, T. (2001) · Nature · doi:10.1038/35081168 · Cited by 980
Induction and Suppression of RNA Silencing by an Animal Virus
Li, H., Li, W. X., & Ding, S. W. (2002) · Science · doi:10.1126/science.1070948 · Cited by 868
RNA virus error catastrophe: Direct molecular test by using ribavirin
Crotty, S., Cameron, C. E., & Andino, R. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.111085598 · Cited by 849
Weber, P. C., Lesburg, C. A., Cable, M., Ferrari, E., Hong, Z., & Mannarino, A. F. (1999) · Nature Structural Biology · doi:10.1038/13305 · Cited by 755
Voinnet, O., Vain, P., Angell, S., & Baulcombe, D. C. (1998) · Cell · doi:10.1016/s0092-8674(00)81749-3 · Cited by 706
Sharp, P. A. (2001) · Genes & Development · doi:10.1101/gad.880001 · Cited by 701
RNA recombination in animal and plant viruses
Lai, M. M. C. (1992) · Microbiological Reviews · doi:10.1128/mmbr.56.1.61-79.1992 · Cited by 664
Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase
Cogoni, C., & Macino, G. (1999) · Nature · doi:10.1038/20215 · Cited by 653
Fast forward genetics based on virus-induced gene silencing
Baulcombe, D. C. (1999) · Current Opinion in Plant Biology · doi:10.1016/s1369-5266(99)80022-3 · Cited by 633
RNA Silencing in Plants--Defense and Counterdefense
Vance, V., & Vaucheret, H. (2001) · Science · doi:10.1126/science.1061334 · Cited by 598
Crystal structure of the RNA-dependent RNA polymerase of hepatitis C virus
Bressanelli, S., Tomei, L., Roussel, A., Incitti, I., Vitale, R. L., Mathieu, M., De Francesco, R., & Rey, F. A. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.23.13034 · Cited by 586
Smardon, A., Spoerke, J. M., Stacey, S. C., Klein, M. E., Mackin, N., & Maine, E. M. (2000) · Current Biology · doi:10.1016/s0960-9822(00)00323-7 · Cited by 538
Switch from translation to RNA replication in a positive-stranded RNA virus
Gamarnik, A. V., & Andino, R. (1998) · Genes & Development · doi:10.1101/gad.12.15.2293 · Cited by 508
A mechanism for initiating RNA-dependent RNA polymerization
Butcher, S. J., Grimes, J. M., Makeyev, E. V., Bamford, D. H., & Stuart, D. I. (2001) · Nature · doi:10.1038/35065653 · Cited by 491
Structure of the RNA-dependent RNA polymerase of poliovirus
Hansen, J. L., Long, A. M., & Schultz, S. C. (1997) · Structure · doi:10.1016/s0969-2126(97)00261-x · Cited by 457
Meiotic Silencing by Unpaired DNA
Shiu, P. K. T., Raju, N. B., Zickler, D., & Metzenberg, R. L. (2001) · Cell · doi:10.1016/s0092-8674(01)00609-2 · Cited by 442
Structure of the reovirus core at 3.6?Å resolution
Reinisch, K. M., Nibert, M. L., & Harrison, S. C. (2000) · Nature · doi:10.1038/35010041 · Cited by 438
Crystal structure of the RNA-dependent RNA polymerase of hepatitis C virus
Ago, H., Adachi, T., Yoshida, A., Yamamoto, M., Habuka, N., Yatsunami, K., & Miyano, M. (1999) · Structure · doi:10.1016/s0969-2126(00)80031-3 · Cited by 417
A Positive-Strand RNA Virus Replication Complex Parallels Form and Function of Retrovirus Capsids
Schwartz, M., Chen, J., Janda, M., Sullivan, M., den Boon, J., & Ahlquist, P. (2002) · Molecular Cell · doi:10.1016/s1097-2765(02)00474-4 · Cited by 397
Self-citationPal-Bhadra, M., Bhadra, U., & Birchler, J. A. (2002) · Molecular Cell · doi:10.1016/s1097-2765(02)00440-9 · Cited by 376
RNAi as Random Degradative PCR
Lipardi, C., Wei, Q., & Paterson, B. M. (2001) · Cell · doi:10.1016/s0092-8674(01)00537-2 · Cited by 374
Matzke, M., Matzke, A. J. M., & Kooter, J. M. (2001) · Science · doi:10.1126/science.1063051 · Cited by 372
Ruvkun, G. (2001) · Science · doi:10.1126/science.1066315 · Cited by 355
Antisense RNA: Function and Fate of Duplex RNA in Cells of Higher Eukaryotes
Kumar, M., & Carmichael, G. G. (1998) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.62.4.1415-1434.1998 · Cited by 320
O'Reilly, E. K., & Kao, C. C. (1998) · Virology · doi:10.1006/viro.1998.9463 · Cited by 309
Bitko, V., & Barik, S. (2001) · BMC Microbiology · doi:10.1186/1471-2180-1-34 · Cited by 287
Lindbo, J. A., Silva-Rosales, L., Proebsting, W. M., & Dougherty, W. G. (1993) · The Plant Cell · doi:10.2307/3869691 · Cited by 286
Lai, M. M. C. (1998) · Virology · doi:10.1006/viro.1998.9098 · Cited by 273
Isolation of an RNA-Directed RNA Polymerase–Specific cDNA Clone from Tomato
Schiebel, W., Pélissier, T., Riedel, L., Thalmeir, S., Schiebel, R., Kempe, D., Lottspeich, F., Sänger, H. L., & Wassenegger, M. (1998) · The Plant Cell · doi:10.1105/tpc.10.12.2087 · Cited by 256
Roles of the influenza virus polymerase and nucleoprotein in forming a functional RNP structure
Klumpp, K., Ruigrok, R. W. H., & Baudin, F. (1997) · The EMBO Journal · doi:10.1093/emboj/16.6.1248 · Cited by 224
Bernstein, E., Denli, A. M., & Hannon, G. J. (2001) · PubMed · Cited by 224
Nishikura, K. (2001) · Cell · doi:10.1016/s0092-8674(01)00581-5 · Cited by 176
Structure of the RNA Polymerase Domain of E. coli Primase
Keck, J. L., Roche, D. D., Lynch, A. S., & Berger, J. M. (2000) · Science · doi:10.1126/science.287.5462.2482 · Cited by 161
Ng, K. K.-S., Cherney, M. M., Vázquez, A. L., Machín, Á., Martín-Alonso, J. M., Parra, F., & James, M. N. G. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m109261200 · Cited by 155
RNA Helicase MUT-14-Dependent Gene Silencing Triggered in C. elegans by Short Antisense RNAs
Tijsterman, M., Ketting, R. F., Okihara, K. L., Sijen, T., & Plasterk, R. H. A. (2002) · Science · doi:10.1126/science.1067534 · Cited by 154
Macnaughton, T. B., Shi, S. T., Modahl, L. E., & Lai, M. M. C. (2002) · Journal of Virology · doi:10.1128/jvi.76.8.3920-3927.2002 · Cited by 134
Host RNA Polymerase Requirements for Transcription of the Human Hepatitis Delta Virus Genome
Moraleda, G., & Taylor, J. M. (2001) · Journal of Virology · doi:10.1128/jvi.75.21.10161-10169.2001 · Cited by 71
Virus-induced cell death in plants expressing the mammalian 2′,5′ oligoadenylate system
Ogawa, T., Hori, T., & Ishida, I. (1996) · Nature Biotechnology · doi:10.1038/nbt1196-1566 · Cited by 61
Cited by
Tolerance for mutations and chemical modifications in a siRNA
Amarzguioui, M. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg147 · Cited by 534
Common and unique features of viral RNA-dependent polymerases
te Velthuis, A. J. W. (2014) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-014-1695-z · Cited by 275
Serva, S., & Nagy, P. D. (2006) · Journal of Virology · doi:10.1128/jvi.80.5.2162-2169.2006 · Cited by 181
Uyaguari-Diaz, M. I., Chan, M., Chaban, B. L., Croxen, M. A., Finke, J. F., Hill, J. E., Peabody, M. A., Van Rossum, T., Suttle, C. A., Brinkman, F. S. L., et al. (2016) · Microbiome · doi:10.1186/s40168-016-0166-1 · Cited by 104
Making of Viral Replication Organelles by Remodeling Interior Membranes
Sasvari, Z., & Nagy, P. D. (2010) · Viruses · doi:10.3390/v2112436 · Cited by 32
Metadata
- Authors
- Ahlquist, P.
- Venue
- Science
- Published
- 2002-05-17
- Volume
- 296
- Issue
- 5571
- Pages
- 1270-1273
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2145665475
- Cited by
- 462
- References
- 46
- FWCI
- 48.25
- Type
- journal article
- Language
- en
- Open access
- closed
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.