Cited by 1,403Genomics and Phylogenetic StudiesChromosomal and Genetic VariationsPrimate Behavior and Ecology

The DOI matches its Crossref record; 70 of the 70 references it cites were found in a registry or an index.

Evolutionary and biomedical insights from the rhesus macaque genome.

Open access

Gibbs, Richard A., Rogers, Jeffrey, Katze, Michael G., Bumgarner, Roger, Weinstock, George M., Mardis, Elaine R., Remington, Karin A., Strausberg, Robert L., Venter, J. Craig, Wilson, Richard K., Batzer, Mark A., Bustamante, Carlos D., Eichler, Evan E., Hahn, Matthew W., Hardison, Ross C., Makova, Kateryna D., Miller, Webb, Milosavljevic, Aleksandar, Palermo, Robert E., Siepel, Adam, Sikela, James M., Attaway, Tony, Bell, Stephanie, Bernard, Kelly E., Buhay, Christian J., Chandrabose, Mimi N., Dao, Marvin, Davis, Clay, Delehaunty, Kimberly D., Ding, Yan, Dinh, Huyen H., Dugan-Rocha, Shannon, Fulton, Lucinda A., Gabisi, Ramatu Ayiesha, Garner, Toni T., Godfrey, Jennifer, Hawes, Alicia C., Hernandez, Judith, Hines, Sandra, Holder, Michael, Hume, Jennifer, Jhangiani, Shalini N., Joshi, Vandita, Khan, Ziad Mohid, Kirkness, Ewen F., Cree, Andrew, Fowler, R. Gerald, Lee, Sandra, Lewis, Lora R., Li, Zhangwan, Liu, Yih-shin, Moore, Stephanie M., Muzny, Donna, Nazareth, Lynne V., Ngo, Dinh Ngoc, Okwuonu, Geoffrey O., Pai, Grace, Parker, David, Paul, Heidie A., Pfannkoch, Cynthia, Pohl, Craig S., Rogers, Yu-Hui, Ruiz, San Juana, Sabo, Aniko, Santibanez, Jireh, Schneider, Brian W., Smith, Scott M., Sodergren, Erica, Svatek, Amanda F., Utterback, Teresa R., Vattathil, Selina, Warren, Wesley, White, Courtney Sherell, Chinwalla, Asif T., Feng, Yucheng, Halpern, Aaron L., Hillier, LaDeana W., Huang, Xiaoqiu, Minx, Pat, Nelson, Joanne O., Pepin, Kymberlie H., Qin, Xiang, Sutton, Granger G., Venter, Eli, Walenz, Brian P., Wallis, John W., Worley, Kim C., Yang, Shiaw-Pyng, Jones, Steven M., Marra, Marco A., Rocchi, Mariano, Schein, Jacqueline E., Baertsch, Robert, Clarke, Laura, Csürös, Miklós, Glasscock, Jarret, Harris, R. Alan, Havlak, Paul, Jackson, Andrew R., Jiang, Huaiyang, Liu, Yue, Messina, David N., Shen, Yufeng, Song, Henry Xing-Zhi, Wylie, Todd, Zhang, Lan, Birney, Ewan, Han, Kyudong, Konkel, Miriam K., Lee, Jungnam, Smit, Arian F. A., Ullmer, Brygg, Wang, Hui, Xing, Jinchuan, Burhans, Richard, Cheng, Ze, Karro, John E., Ma, Jian, Raney, Brian, She, Xinwei, Cox, Michael J., Demuth, Jeffery P., Dumas, Laura J., Han, Sang-Gook, Hopkins, Janet, Karimpour-Fard, Anis, Kim, Young H., Pollack, Jonathan R., Vinar, Tomas, Addo-Quaye, Charles, Degenhardt, Jeremiah, Denby, Alexandra, Hubisz, Melissa J., Indap, Amit, Kosiol, Carolin, Lahn, Bruce T., Lawson, Heather A., Marklein, Alison, Nielsen, Rasmus, Vallender, Eric J., Clark, Andrew G., Ferguson, Betsy, Hernandez, Ryan D., Hirani, Kashif, Kehrer-Sawatzki, Hildegard, Kolb, Jessica, Patil, Shobha, Pu, Ling-Ling, Ren, Yanru, Smith, David Glenn, Wheeler, David A., Schenck, Ian, Ball, Edward V., Chen, Rui, Cooper, David N., Giardine, Belinda, Hsu, Fan, Kent, W. James, Lesk, Arthur, Nelson, David L., O'Brien, William E., Prüfer, Kay, Stenson, Peter D., Wallace, James C., Ke, Hui, Liu, Xiao-Ming, Wang, Peng, Xiang, Andy Peng, Yang, Fan, Barber, Galt P., Haussler, David, Karolchik, Donna, Kern, Andy D., Kuhn, Robert M., Smith, Kayla E., Zwieg, Ann S.·2007·Science

DOI 10.1126/science.1139247

Open this paper in CoChat — free account Open PDF

Abstract

The rhesus macaque ( Macaca mulatta ) is an abundant primate species that diverged from the ancestors of Homo sapiens about 25 million years ago. Because they are genetically and physiologically similar to humans, rhesus monkeys are the most widely used nonhuman primate in basic and applied biomedical research. We determined the genome sequence of an Indian-origin Macaca mulatta female and compared the data with chimpanzees and humans to reveal the structure of ancestral primate genomes and to identify evidence for positive selection and lineage-specific expansions and contractions of gene families. A comparison of sequences from individual animals was used to investigate their underlying genetic diversity. The complete description of the macaque genome blueprint enhances the utility of this animal model for biomedical research and improves our understanding of the basic biology of the species.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

Integrity signals

Registry

Crossref · 10.1126/science.1139247

Cites

70 of 70 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Gene Ontology: tool for the unification of biology
Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P., Dolinski, K., Dwight, S. S., Eppig, J. T., et al. (2000) · Nature Genetics · doi:10.1038/75556 · Cited by 43,206
Initial sequencing and analysis of the human genome
International Human Genome Sequencing Consortium, Whitehead Institute for Biomedical Research, C. F. G. R., Lander, E. S., Linton, L. M., Birren, B., Nusbaum, C., Zody, M. C., Baldwin, J., Devon, K., Dewar, K., et al. (2001) · Nature · doi:10.1038/35057062 · Cited by 24,216
Self-citation
<tt>BLAT</tt> —The <tt>BLAST</tt> -Like Alignment Tool
Kent, W. J. (2002) · Genome Research · doi:10.1101/gr.229202 · Cited by 8,480
PAML: a program package for phylogenetic analysis by maximum likelihood
Yang, Z. (1997) · Computer applications in the biosciences · doi:10.1093/bioinformatics/13.5.555 · Cited by 5,377
NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins
Pruitt, K. D., Tatusova, T. A., & Maglott, D. R. (2006) · Nucleic Acids Research · doi:10.1093/nar/gkl842 · Cited by 4,441
On the number of segregating sites in genetical models without recombination
Watterson, G. A. (1975) · Theoretical Population Biology · doi:10.1016/0040-5809(75)90020-9 · Cited by 3,933
Diabetes mellitus: a "thrifty" genotype rendered detrimental by "progress"?
Neel, J. V. (1962) · Europe PMC (PubMed Central) · Cited by 3,172
Detection of large-scale variation in the human genome
Iafrate, A. J., Feuk, L., Rivera, M. N., Listewnik, M. L., Donahoe, P. K., Qi, Y., Scherer, S. W., & Lee, C. (2004) · Nature Genetics · doi:10.1038/ng1416 · Cited by 2,892
Large-scale copy number polymorphism in the human genome
Sebat, J., Lakshmi, B., Troge, J., Alexander, J., Young, J., Lundin, P., Månér, S., Massa, H., Walker, M., Chi, M., et al. (2004) · Science · doi:10.1126/science.1098918 · Cited by 2,557
Initial sequence of the chimpanzee genome and comparison with the human genome
The Chimpanzee Sequencing and Analysis Consortium (2005) · Nature · doi:10.1038/nature04072 · Cited by 2,459

Flagged first, then by citations

Show all 69 references

Research works printed but not linked: 6

C. Groves Primate Taxonomy (Smithsonian Institution Press Washington DC 2001).
J. L. Ashurst et al., Nucleic Acids Res.33, D459 (2005).
N. Goldman, Z. Yang, Mol. Biol. Evol.11, 725 (1994).
Z. Yang, Comput. Appl. Biosci.13, 555 (1997).
R. D. Hernandez et al., Science316, XXXX (2007).
J. V. Neel, Am. J. Hum. Genet.14, 353 (1962).

Sorted by citations

Items 401–500 of 1,001

Large-scale analysis of Macaca fascicularis transcripts and inference of genetic divergence between M. fascicularis and M. mulatta
Osada, N., Hashimoto, K., Kameoka, Y., Hirata, M., Tanuma, R., Uno, Y., Inoue, I., Hida, M., Suzuki, Y., Sugano, S., et al. (2008) · BMC Genomics · doi:10.1186/1471-2164-9-90 · Cited by 43
Genomics and proteomics of vertebrate cholesterol ester lipase (LIPA) and cholesterol 25-hydroxylase (CH25H)
Holmes, R. S., VandeBerg, J. L., & Cox, L. A. (2011) · 3 Biotech · doi:10.1007/s13205-011-0013-9 · Cited by 46
An alternative pathway for Alu retrotransposition suggests a role in DNA double-strand break repair
Srikanta, D., Sen, S. K., Huang, C. T., Conlin, E. M., Rhodes, R. M., & Batzer, M. A. (2008) · Genomics · doi:10.1016/j.ygeno.2008.09.016 · Cited by 43
Self-citation
Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region
Mohajeri, K., Cantsilieris, S., Huddleston, J., Nelson, B. J., Coe, B. P., Campbell, C. D., Baker, C., Harshman, L., Munson, K. M., Kronenberg, Z. N., et al. (2016) · Genome Research · doi:10.1101/gr.211284.116 · Cited by 42
Self-citation
Lineage-specific accelerated sequences underlying primate evolution
Bi, X., Zhou, L., Zhang, J.-J., Feng, S., Hu, M. Y., Cooper, D. N., Lin, J., Li, J., Wu, D., & Zhang, G. (2023) · Science Advances · doi:10.1126/sciadv.adc9507 · Cited by 46
Self-citation
Testing NF-κB-based Therapy in Hemiparkinsonian Monkeys
Mondal, S., Roy, A., Jana, A., Ghosh, S., Kordower, J. H., & Pahan, K. (2012) · Journal of Neuroimmune Pharmacology · doi:10.1007/s11481-012-9377-9 · Cited by 42
Use of an anti‐CD16 antibody for in vivo depletion of natural killer cells in rhesus macaques
Choi, E. I., Wang, R., Peterson, L., Letvin, N. L., & Reimann, K. A. (2008) · Immunology · doi:10.1111/j.1365-2567.2007.02757.x · Cited by 42
Identification of novel homologous microRNA genes in the rhesus macaque genome
Yue, J., Yi, S., & Orwig, K. E. (2008) · BMC Genomics · doi:10.1186/1471-2164-9-8 · Cited by 41
Protein Kinase C Mediated Extraembryonic Endoderm Differentiation of Human Embryonic Stem Cells
Feng, X., Zhang, J., Smuga‐Otto, K., Tian, S., Yu, J., Stewart, R. M., & Thomson, J. A. (2011) · Stem Cells · doi:10.1002/stem.1018 · Cited by 41
Repertoire comparison of the B‐cell receptor‐encoding loci in humans and rhesus macaques by next‐generation sequencing
Vigdorovich, V. I., Oliver, B. G. G., Carbonetti, S., Dambrauskas, N., Lange, M. D., Yacoob, C., Leahy, W., Callahan, J., Stamatatos, L., & Sather, D. N. (2016) · Clinical & Translational Immunology · doi:10.1038/cti.2016.42 · Cited by 41
Heightened extended amygdala metabolism following threat characterizes the early phenotypic risk to develop anxiety-related psychopathology
Shackman, A. J., Fox, A. S., Oler, J. A., Shelton, S. E., Oakes, T. R., Davidson, R. J., & Kalin, N. H. (2016) · Molecular Psychiatry · doi:10.1038/mp.2016.132 · Cited by 40
Whole thorax irradiation of non-human primates induces persistent nuclear damage and gene expression changes in peripheral blood cells
Ghandhi, S. A., Turner, H. C., Shuryak, I., Dugan, G. O., Bourland, J. D., Olson, J. D., Tooze, J. A., Morton, S. R., Batinic̈‐Haberle, I., Cline, J. M., et al. (2018) · PLoS ONE · doi:10.1371/journal.pone.0191402 · Cited by 41
The Gastrointestinal Subsyndrome of the Acute Radiation Syndrome in Rhesus Macaques: A Systematic Review of the Lethal Dose-response Relationship With and Without Medical Management
MacVittie, T. J., Farese, A. M., Parker, G. A., Jackson, W., Booth, C. E., Tudor, G. L., Hankey, K. G., & Potten, C. S. (2019) · Health Physics · doi:10.1097/hp.0000000000000903 · Cited by 41
Vestigial auriculomotor activity indicates the direction of auditory attention in humans
Strauß, D. J., Corona–Strauss, F. I., Schroeer, A., Flotho, P., Hannemann, R., & Hackley, S. A. (2020) · eLife · doi:10.7554/elife.54536 · Cited by 41
New insights into the evolution of chorionic gonadotrophin
Henke, A., & Gromoll, J. (2008) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2008.05.009 · Cited by 43
The ethics of using transgenic non-human primates to study what makes us human
Coors, M. E., Glover, J. J., Juengst, E. T., & Sikela, J. M. (2010) · Nature Reviews Genetics · doi:10.1038/nrg2864 · Cited by 41
Self-citation
Cell Contact–Dependent Priming and Fc Interaction with CD32+ Immune Cells Contribute to the TGN1412-Triggered Cytokine Response
Bartholomaeus, P., Semmler, L. Y., Bukur, T., Boisguerin, V., Römer, P. S., Tabares, P., Chuvpilo, S., Tyrsin, D. Y., Matskevich, A., Hengel, H., et al. (2014) · The Journal of Immunology · doi:10.4049/jimmunol.1302461 · Cited by 40
A single-cell multi-omic atlas spanning the adult rhesus macaque brain
Chiou, K. L., Huang, X., Bohlen, M. O., Tremblay, S., DeCasien, A. R., O’Day, D. R., Spurrell, C. H., Gogate, A. A., Zintel, T. M., Andrews, M. G., et al. (2023) · Science Advances · doi:10.1126/sciadv.adh1914 · Cited by 44
Self-citation
Co‐evolution of the MHC class I and KIR gene families in rhesus macaques: ancestry and plasticity
de Groot, N. G., Blokhuis, J. H., Otting, Ń., Doxiadis, G. G. M., & Bontrop, R. E. (2015) · Immunological Reviews · doi:10.1111/imr.12313 · Cited by 40
Determining genetic background in captive stocks of cynomolgus macaques (Macaca fascicularis)
Stevison, L. S., & Kohn, M. H. (2008) · Journal of Medical Primatology · doi:10.1111/j.1600-0684.2008.00292.x · Cited by 40
Ancient hybridization and admixture in macaques (genus Macaca) inferred from whole genome sequences
Fan, Z., Zhou, A., Osada, N., Yu, J., Jiang, J., Li, J., Du, L., Niu, L., Deng, J., Xu, H., et al. (2018) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2018.03.038 · Cited by 39
Self-citation
Deficiency of PRKD2 triggers hyperinsulinemia and metabolic disorders
Xiao, Y., Wang, C., Chen, J., Lu, F., Wang, J., Hou, N., Hu, X., Zeng, F., Ma, D., Sun, X., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-04352-z · Cited by 39
Self-citation
Large-scale discovery of insertion hotspots and preferential integration sites of human transposed elements
Levy, A., Schwartz, S., & Ast, G. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp1134 · Cited by 41
Genome sequence and global sequence variation map with 5.5 million SNPs in Chinese rhesus macaque
Fang, X., Zhang, Y., Zhang, R., Yang, L., Li, M., Ye, K., Guo, X., Wang, J., & Su, B. (2011) · Genome biology · doi:10.1186/gb-2011-12-7-r63 · Cited by 39
Nonhuman Primate Models of Neuropsychiatric Disorders: Influences of Early Rearing, Genetics, and Epigenetics
Dettmer, A. M., & Suomi, S. J. (2014) · ILAR Journal · doi:10.1093/ilar/ilu025 · Cited by 42
The role of major immune cells in myocardial infarction
Feng, Q., Li, Q., Zhou, H., Sun, L., Lin, C., Ye, J., Wang, D., & Guo, G. (2023) · Frontiers in Immunology · doi:10.3389/fimmu.2022.1084460 · Cited by 46
Evolutionary rate variation in Old World monkeys
Elango, N., Lee, J., Peng, Z., Loh, Y. E., & Yi, S. V. (2009) · Biology Letters · doi:10.1098/rsbl.2008.0712 · Cited by 39
Self-citation
Inversion variants in human and primate genomesPreprint
Catacchio, C. R., Maggiolini, F. A. M., D’Addabbo, P., Bitonto, M., Capozzi, O., Signorile, M. L., Miroballo, M., Archidiacono, N., Eichler, E. E., Ventura, M., et al. (2018) · Genome Research · doi:10.1101/gr.234831.118 · Cited by 38
Self-citation
Forces shaping major histocompatibility complex evolution in two hyena species
Califf, K. J., Ratzloff, E. K., Wagner, A. P., Holekamp, K. E., & Williams, B. L. (2013) · Journal of Mammalogy · doi:10.1644/12-mamm-a-054.1 · Cited by 38
Large-scale transcriptome sequencing and gene analyses in the crab-eating macaque (Macaca fascicularis) for biomedical research
Huh, J., Kim, Y., Park, S.-J., Kim, D., Lee, S., Kim, K.-M., Jeong, K.-J., Kim, J.-S., Song, B., Sim, B., et al. (2012) · BMC Genomics · doi:10.1186/1471-2164-13-163 · Cited by 38
Self-citation
Simulation of Genome-Wide Evolution under Heterogeneous Substitution Models and Complex Multispecies Coalescent Histories
Arenas, M., & Posada, D. (2014) · Molecular Biology and Evolution · doi:10.1093/molbev/msu078 · Cited by 38
Dopamine pathway is highly diverged in primate species that differ markedly in social behavior
Bergey, C. M., Phillips‐Conroy, J. E., Disotell, T. R., & Jolly, C. J. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1525530113 · Cited by 39
Fibroblast-adapted human CMV vaccines elicit predominantly conventional CD8 T cell responses in humans
Murray, S., Nesterenko, P. A., Vanarsdall, A. L., Munks, M. W., Smart, S. M., Veziroglu, E. M., Sagario, L. C., Lee, R., Claas, F. H. J., Doxiadis, I. I. N., et al. (2017) · The Journal of Experimental Medicine · doi:10.1084/jem.20161988 · Cited by 38
Large Animal Models of Glioma: Current Status and Future Prospects
Hicks, W. H., Bird, C. E., Pernik, M. N., Haider, A. S., Dobariya, A., Abdullah, K. G., Aoun, S. G., Bentley, R. T., Cohen‐Gadol, A., Bachoo, R. M., et al. (2021) · Anticancer Research · doi:10.21873/anticanres.15347 · Cited by 44
Lineage-Specific Variation in Intensity of Natural Selection in Mammals
Toll‐Riera, M., Laurie, S., & Albà, M. M. (2010) · Molecular Biology and Evolution · doi:10.1093/molbev/msq206 · Cited by 39
Associations of genetic polymorphisms of Siglecs with human diseases
Angata, T. (2014) · Glycobiology · doi:10.1093/glycob/cwu043 · Cited by 39
Calcitonin receptor-stimulating peptide: Its evolutionary and functional relationship with calcitonin/calcitonin gene-related peptide based on gene structure
Katafuchi, T., Yasue, H., Osaki, T., & Minamino, N. (2009) · Peptides · doi:10.1016/j.peptides.2009.06.012 · Cited by 37
From Perception to Pleasure
Zatorre, R. J. (2023) · doi:10.1093/oso/9780197558287.001.0001 · Cited by 43
Proteomic analysis of the nucleus accumbens in rhesus monkeys of morphine dependence and withdrawal intervention
Bu, Q., Yang, Y., Yan, G., Hu, Z., Hu, C., Duan, J.-C., Lv, L., Zhou, J., Zhao, J., Shao, X., et al. (2011) · Journal of Proteomics · doi:10.1016/j.jprot.2011.11.008 · Cited by 36
Interstitial cells of Cajal in the cynomolgus monkey rectoanal region and their relationship to sympathetic and nitrergic nerves
Cobine, C. A., Hennig, G. W., Bayguinov, Y. R., Hatton, W. J., Ward, S. M., & Keef, K. D. (2010) · American Journal of Physiology-Gastrointestinal and Liver Physiology · doi:10.1152/ajpgi.00260.2009 · Cited by 37
The rhesus macaque is three times as diverse but more closely equivalent in damaging coding variation as compared to the human
Yuan, Q., Zhou, Z.-F., Lindell, S. G., Higley, J., Ferguson, B., Thompson, R. C., Lopez, J. F., Suomi, S., Baghal, B., Baker, M., et al. (2012) · BMC Genetics · doi:10.1186/1471-2156-13-52 · Cited by 39
Self-citation
Metabolomic analysis of CSF indicates brain metabolic impairment precedes hematological indices of anemia in the iron-deficient infant monkey
Rao, R., Ennis, K., Lubach, G. R., Lock, E. F., Georgieff, M., & Coe, C. L. (2016) · Nutritional Neuroscience · doi:10.1080/1028415x.2016.1217119 · Cited by 38
Using pupil size and heart rate to infer affective states during behavioral neurophysiology and neuropsychology experiments
Mitz, A. R., Chacko, R. V., Putnam, P. T., Rudebeck, P. H., & Murray, E. A. (2017) · Journal of Neuroscience Methods · doi:10.1016/j.jneumeth.2017.01.004 · Cited by 36
Whole genome sequencing predicts novel human disease models in rhesus macaques
Bimber, B. N., Ramakrishnan, R., Cervera‐Juanes, R. P., Madhira, R., Peterson, S. M., Norgren, R. B., & Ferguson, B. M. (2017) · Genomics · doi:10.1016/j.ygeno.2017.04.001 · Cited by 38
Self-citation
Conserved signaling pathways genetically associated with longevity across the species
Khan, A. H., Zou, Z., Yang, X. D., Chen, S., & Tian, X. (2018) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2018.09.001 · Cited by 41
Expression of Genes Encoding Multi-Transmembrane Proteins in Specific Primate Taste Cell Populations
Moyer, B. D., Hevezi, P. A., Gao, N., Lü, M., Kalabat, D. Y., Soto, H., Echeverri, F., Laita, B., Yeh, S. A., Zoller, M. J., et al. (2009) · PLoS ONE · doi:10.1371/journal.pone.0007682 · Cited by 37
The effect of SNP discovery method and sample size on estimation of population genetic data for Chinese and Indian rhesus macaques (Macaca mulatta)
Trask, J. A. S., Malhi, R. S., Kanthaswamy, S., Johnson, J. W., Garnica, W. T., Malladi, V. S., & Smith, D. G. (2011) · Primates · doi:10.1007/s10329-010-0232-4 · Cited by 35
Self-citation
Diversity of MHC class I haplotypes in cynomolgus macaques
Saito, Y., Naruse, T. K., Akari, H., Matano, T., & Kimura, A. (2011) · Immunogenetics · doi:10.1007/s00251-011-0568-y · Cited by 36
Ancient and Recent Adaptive Evolution of Primate Non-Homologous End Joining Genes
Demogines, A., East, A. M., Lee, J., Grossman, S. R., Sabeti, P. C., Paull, T. T., & Sawyer, S. L. (2010) · PLoS Genetics · doi:10.1371/journal.pgen.1001169 · Cited by 36
Self-citation
A Null Allele Impairs Function of CYP2C76 Gene in Cynomolgus Monkeys: A Possible Genetic Tool for Generation of a Better Animal Model in Drug Metabolism
Uno, Y., Sakuraba, H., Uehara, S., Kumano, T., Matsuno, K., Nakamura, C., Kito, G., Kamataki, T., & Nagata, R. (2008) · Drug Metabolism and Disposition · doi:10.1124/dmd.108.023622 · Cited by 36
Lizards and LINEs: Selection and Demography Affect the Fate of L1 Retrotransposons in the Genome of the Green Anole (Anolis carolinensis)
Tollis, M., & Boissinot, S. (2013) · Genome Biology and Evolution · doi:10.1093/gbe/evt133 · Cited by 36
Macaque Proteome Response to Highly Pathogenic Avian Influenza and 1918 Reassortant Influenza Virus Infections
Brown, J. N., Palermo, R. E., Baskin, C. R., Gritsenko, M., Sabourin, P. J., Long, J. P., Sabourin, C. L. K., Bielefeldt‐Ohmann, H., García‐Sastre, A., Albrecht, R. A., et al. (2010) · Journal of Virology · doi:10.1128/jvi.01129-10 · Cited by 36
Self-citation
Preclinical assessment of the receptor-binding domain of Plasmodium vivax Duffy-binding protein as a vaccine candidate in rhesus macaques
Moreno, A., Caro-Aguilar, I., Yazdani, S. S., Shakri, A. R., Lapp, S. A., Strobert, E. A., McClure, H. M., Chitnis, C. E., & Galinski, M. R. (2008) · Vaccine · doi:10.1016/j.vaccine.2008.06.010 · Cited by 36
Reduced Genotoxicity of Avian Sarcoma Leukosis Virus Vectors in Rhesus Long-term Repopulating Cells Compared to Standard Murine Retrovirus Vectors
Hu, J., Renaud, G., Golmes, T., Ferris, A. L., Hendrie, P. C., Donahue, R. E., Hughes, S. H., Wolfsberg, T. G., Russell, D. W., & Dunbar, C. E. (2008) · Molecular Therapy · doi:10.1038/mt.2008.135 · Cited by 36
Evolutionary Interrogation of Human Biology in Well-Annotated Genomic Framework of Rhesus Macaque
Zhang, S., Liu, C., Yu, P., Zhong, X., Chen, J., Yang, X., Peng, J., Yan, S., Wang, C., Zhu, X., et al. (2014) · Molecular Biology and Evolution · doi:10.1093/molbev/msu084 · Cited by 36
Inverse relationship between genetic diversity and epigenetic complexityPreprint
Huang, S. (2009) · Nature Precedings · doi:10.1038/npre.2009.1751.2 · Cited by 36
CYBB, an NADPH-oxidase gene: restricted diversity in humans and evidence for differential long-term purifying selection on transmembrane and cytosolic domains
Tarazona‐Santos, E., Bernig, T., Burdett, L. A., Magalhães, W. C. S., Fabbri, C., Liao, J. S., Redondo, R. A. F., Welch, R. A., Yeager, M., & Chanock, S. J. (2008) · Human Mutation · doi:10.1002/humu.20667 · Cited by 35
Phylogeny of Tec Family Kinases: Identification of a Premetazoan Origin of Btk, Bmx, Itk, Tec, Txk, and the Btk Regulator SH3BP5
Ortutay, C., Nore, B. F., Vihinen, M., & Smith, C. I. E. (2008) · Advances in genetics · doi:10.1016/s0065-2660(08)00803-1 · Cited by 34
Efficient Generation of Nonhuman Primate Induced Pluripotent Stem Cells
Zhong, B., Trobridge, G. D., Zhang, X., Watts, K. L., Ramakrishnan, A., Wohlfahrt, M. E., Adair, J. E., & Kiem, H. (2010) · Stem Cells and Development · doi:10.1089/scd.2010.0343 · Cited by 35
Evolutionary and biochemical differences between human and monkey acidic mammalian chitinases
Krykbaev, R. A., Fitz, L. J., Reddy, P. S., Winkler, A. R., Xuan, D., Yang, X., Fleming, M. M., & Wolf, S. F. (2009) · Gene · doi:10.1016/j.gene.2009.12.005 · Cited by 35
Systematic identification and evolutionary features of rhesus monkey small nucleolar RNAs
Zhang, Y., Liu, J., Jia, C., Li, T., Wu, R., Wang, J., Chen, Y., Zou, X., Chen, R., Wang, X., et al. (2010) · BMC Genomics · doi:10.1186/1471-2164-11-61 · Cited by 36
Self-citation
The psoriasis-associated deletion of late cornified envelope genes LCE3B and LCE3C has been maintained under balancing selection since Human Denisovan divergence
Pajic, P., Lin, Y., Xu, D., & Gökçümen, Ö. (2016) · BMC Evolutionary Biology · doi:10.1186/s12862-016-0842-6 · Cited by 38
The Rhesus Macaque as a Translational Model for Neurodegeneration and Alzheimer’s Disease
Stonebarger, G. A., Bimonte‐Nelson, H. A., & Urbanski, H. F. (2021) · Frontiers in Aging Neuroscience · doi:10.3389/fnagi.2021.734173 · Cited by 38
HIV-1/AIDS susceptibility and copy number variation in CCL3L1, a gene encoding a natural ligand for HIV-1 co-receptor CCR5
Nakajima, T., Kaur, G., Mehra, N. K., & Kimura, A. (2008) · Cytogenetic and Genome Research · doi:10.1159/000184703 · Cited by 35
Realistic artificial DNA sequences as negative controls for computational genomics
Caballero-Pérez, J., Smit, A. F. A., Hood, L., & Glusman, G. (2014) · Nucleic Acids Research · doi:10.1093/nar/gku356 · Cited by 35
Self-citation
Evolution of the CYP2D gene cluster in humans and four non-human primates
Yasukochi, Y., & Satta, Y. (2011) · Genes & Genetic Systems · doi:10.1266/ggs.86.109 · Cited by 35
Evidence of a Paucity of Genes That Interact with the Mitochondrion on the X in Mammals
Drown, D. M., Preuss, K. M., & Wade, M. J. (2012) · Genome Biology and Evolution · doi:10.1093/gbe/evs064 · Cited by 38
Single‐Nucleotide Polymorphisms Reveal Patterns of Allele Sharing Across the Species Boundary Between Rhesus (Macaca mulatta) and Cynomolgus (M. fascicularis) Macaques
Trask, J. A. S., Garnica, W. T., Smith, D. G., Houghton, P., Lerche, N. W., & Kanthaswamy, S. (2012) · American Journal of Primatology · doi:10.1002/ajp.22091 · Cited by 34
Self-citation
Genetic analysis of samples from wild populations opens new perspectives on hybridization between long‐tailed (Macaca fascicularis) and rhesus macaques (Macaca mulatta)
Bunlungsup, S., Kanthaswamy, S., Oldt, R. F., Smith, D. G., Houghton, P., Hamada, Y., & Malaivijitnond, S. (2017) · American Journal of Primatology · doi:10.1002/ajp.22726 · Cited by 34
Self-citation
The use of nonhuman primates in studies of noise injury and treatment
Burton, J. A., Valero, M. D., Hackett, T. A., & Ramachandran, R. (2019) · The Journal of the Acoustical Society of America · doi:10.1121/1.5132709 · Cited by 35
Eph receptors: the bridge linking host and virus
Wang, J., Zheng, X., Qiu, P., Zhang, X., & Qin, Z. (2019) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-019-03409-6 · Cited by 34
Enhancement of Migration and Tenogenic Differentiation of Macaca Mulatta Tendon-Derived Stem Cells by Decellularized Tendon Hydrogel
Ning, L., Zhang, Y., Zhang, Y., Zhu, M., Ding, W., Jiang, Y., Zhang, Y., Luo, J., & Qin, T. (2021) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2021.651583 · Cited by 34
Questions regarding the predictive value of one evolved complex adaptive system for a second: Exemplified by the SOD1 mouse
Greek, R., & Hansen, L. A. (2013) · Progress in Biophysics and Molecular Biology · doi:10.1016/j.pbiomolbio.2013.06.002 · Cited by 34
Simian herpesviruses and their risk to humans
Estep, R. D., Messaoudi, I., & Wong, S. W. (2010) · Vaccine · doi:10.1016/j.vaccine.2009.11.026 · Cited by 34
Mammalian carboxylesterase 5: Comparative biochemistry and genomics
Holmes, R. S., Cox, L. A., & VandeBerg, J. L. (2008) · Comparative Biochemistry and Physiology Part D Genomics and Proteomics · doi:10.1016/j.cbd.2008.05.002 · Cited by 34
The Effect of Species Representation on the Detection of Positive Selection in Primate Gene Data Sets
McBee, R. M., Rozmiarek, S. A., Meyerson, N. R., Rowley, P. A., & Sawyer, S. L. (2015) · Molecular Biology and Evolution · doi:10.1093/molbev/msu399 · Cited by 38
KIR3DL01 Recognition of Bw4 Ligands in the Rhesus Macaque: Maintenance of Bw4 Specificity since the Divergence of Apes and Old World Monkeys
Schafer, J. L., Colantonio, A. D., Neidermyer, W. J., Dudley, D. M., Connole, M., O’Connor, D. H., & Evans, D. T. (2014) · The Journal of Immunology · doi:10.4049/jimmunol.1302883 · Cited by 33
Selection of New Appropriate Reference Genes for RT-qPCR Analysis via Transcriptome Sequencing of Cynomolgus Monkeys (Macaca fascicularis)
Park, S.-J., Kim, Y., Huh, J., Lee, S., Kim, S., Kim, S., Kim, J., Jeong, K.-J., Kim, K.-M., Kim, H., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0060758 · Cited by 33
Self-citation
An ex vivo bladder model with detrusor smooth muscle removed to analyse biologically active mediators released from the suburothelium
Durnin, L., Kwok, B., Kukadia, P., McAvera, R. M., Corrigan, R. D., Ward, S. M., Zhang, Y., Chen, Q., Koh, S. D., Sanders, K. M., et al. (2018) · The Journal of Physiology · doi:10.1113/jp276924 · Cited by 33
Nonhuman primate genetic models for the study of rare diseases
Vallender, E. J., Hotchkiss, C. E., Lewis, A. D., Rogers, J., Stern, J. A., Peterson, S. M., Ferguson, B. M., & Sayers, K. (2023) · Orphanet Journal of Rare Diseases · doi:10.1186/s13023-023-02619-3 · Cited by 36
Self-citation
Patterns of Positive Selection and Neutral Evolution in the Protein-Coding Genes of Tetraodon and Takifugu
Montoya‐Burgos, J. I. (2011) · PLoS ONE · doi:10.1371/journal.pone.0024800 · Cited by 32
Effects of age on clock gene expression in the rhesus macaque pituitary gland
Sitzmann, B. D., Lemos, D. R., Ottinger, M. A., & Urbanski, H. F. (2008) · Neurobiology of Aging · doi:10.1016/j.neurobiolaging.2008.05.024 · Cited by 33
Characterization of single-nucleotide variation in Indian-origin rhesus macaques (Macaca mulatta)
Fawcett, G., Raveendran, M., Deiros, D. R., Chen, D., Yu, F.-L., Harris, R. A., Ren, Y.-R., Muzny, D., Reid, J., Wheeler, D., et al. (2011) · BMC Genomics · doi:10.1186/1471-2164-12-311 · Cited by 38
Self-citation
The monkey's perspective
Disotell, T. R., & Tosi, A. J. (2007) · Genome biology · doi:10.1186/gb-2007-8-9-226 · Cited by 33
Germline and somatic imprinting in the nonhuman primate highlights species differences in oocyte methylationPreprint
Cheong, C. Y., Chng, K., Ng, S., Chew, S. B., Chan, L., & Ferguson‐Smith, A. C. (2015) · Genome Research · doi:10.1101/gr.183301.114 · Cited by 33
Selection on the Protein-Coding Genome
Kosiol, C., & Anisimova, M. O. (2012) · Methods in molecular biology · doi:10.1007/978-1-61779-585-5_5 · Cited by 32
Self-citation
Understanding the heterogeneity of anxiety using a translational neuroscience approach
Drzewiecki, C. M., & Fox, A. S. (2024) · Cognitive Affective & Behavioral Neuroscience · doi:10.3758/s13415-024-01162-3 · Cited by 34
The precision of the hominid timescale estimated by relaxed clock methods
Schrago, C. G., & Voloch, C. M. (2013) · Journal of Evolutionary Biology · doi:10.1111/jeb.12076 · Cited by 33
Comparative study on synteny between yeasts and vertebrates
Drillon, G., & Fischer, G. (2011) · Comptes Rendus Biologies · doi:10.1016/j.crvi.2011.05.011 · Cited by 31
Chemical Induction of Endogenous Retrovirus Particles from the Vero Cell Line of African Green Monkeys
Ma, H., Ma, Y., Ma, W., Williams, D. K., Galvin, T. A., & Khan, A. S. (2011) · Journal of Virology · doi:10.1128/jvi.00147-11 · Cited by 32
Establishment and ultrasound characteristics of atherosclerosis in rhesus monkey
Zeng, W., Wen, X., Gong, L., Sun, J., Yang, J., Liao, J., Qian, C., Chen, W., Song, B., & Gao, F. (2015) · BioMedical Engineering OnLine · doi:10.1186/1475-925x-14-s1-s13 · Cited by 32
Improving the in silico assessment of pathogenicity for compensated variants
Azevedo, L., Mort, M. E., Costa, A. C., Silva, R. M., Quelhas, D., Amorim, A., & Cooper, D. N. (2016) · European Journal of Human Genetics · doi:10.1038/ejhg.2016.129 · Cited by 34
Self-citation
Prostaglandin E2 Receptors Are Differentially Expressed in Subpopulations of Granulosa Cells from Primate Periovulatory Follicles1
Harris, S. M., Aschenbach, L. C., Skinner, S. M., Dozier, B. L., & Duffy, D. M. (2011) · Biology of Reproduction · doi:10.1095/biolreprod.111.091306 · Cited by 32
The Role of Production Frequency in the Sharing of Simian Immunodeficiency Virus-Specific CD8+ TCRs between Macaques
Venturi, V., Chin, H. Y., Price, D. A., Douek, D. C., & Davenport, M. P. (2008) · The Journal of Immunology · doi:10.4049/jimmunol.181.4.2597 · Cited by 32
RhesusBase: a knowledgebase for the monkey research community
Zhang, S., Liu, C., Shi, M., Kong, L., Chen, J., Zhou, W., Zhu, X., Yu, P., Wang, J., Yang, X., et al. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks835 · Cited by 32
Differential virus restriction patterns of rhesus macaque and human APOBEC3A: Implications for lentivirus evolution
Schmitt, K. P., Guo, K., Algaier, M., Ruiz, A. J., Cheng, F., Qiu, J., Wissing, S., Santiago, M. L., & Stephens, E. B. (2011) · Virology · doi:10.1016/j.virol.2011.07.017 · Cited by 31
Epigenetic Regulation by Chromatin Activation Mark H3K4me3 in Primate Progenitor Cells within Adult Neurogenic Niche
Sandstrom, R. S., Foret, M. R., Grow, D. A., Haugen, E., Rhodes, C. T., Cardona, A. E., Phelix, C. F., Wang, Y., Berger, M. S., & Lin, C. A. (2014) · Scientific Reports · doi:10.1038/srep05371 · Cited by 33
547 transcriptomes from 44 brain areas reveal features of the aging brain in non-human primates
Li, M., Wu, S., Zhang, J.-J., Tian, H.-Y., Shao, Y., Wang, Z., Irwin, D. M., Li, J., Hu, X., & Wu, D. (2019) · Genome biology · doi:10.1186/s13059-019-1866-1 · Cited by 32
Antidiabetic effect of an engineered bacterium Lactobacillus plantarum-pMG36e -GLP-1 in monkey model
Luo, J., Zhang, H., Lu, J., Ma, C., & Chen, T. (2021) · Synthetic and Systems Biotechnology · doi:10.1016/j.synbio.2021.09.009 · Cited by 33
Functional variation in the 3′ untranslated region of the serotonin transporter in human and rhesus macaque
Vallender, E. J., Priddy, C. M., Hakim, S., Yang, H., Chen, G., & Miller, G. M. (2008) · Genes Brain & Behavior · doi:10.1111/j.1601-183x.2008.00407.x · Cited by 31
Self-citation

Authors: Gibbs, R. A., Rogers, J., Katze, M. G., Bumgarner, R., Weinstock, G. M., Mardis, E. R., Remington, K. A., Strausberg, R. L., Venter, J. C., Wilson, R. K., Batzer, M. A., Bustamante, C. D., Eichler, E. E., Hahn, M. W., Hardison, R. C., Makova, K. D., Miller, W., Milosavljevic, A., Palermo, R. E., Siepel, A., Sikela, J. M., Attaway, T., Bell, S., Bernard, K. E., Buhay, C. J., Chandrabose, M. N., Dao, M., Davis, C., Delehaunty, K. D., Ding, Y., Dinh, H. H., Dugan-Rocha, S., Fulton, L. A., Gabisi, R. A., Garner, T. T., Godfrey, J., Hawes, A. C., Hernandez, J., Hines, S., Holder, M., Hume, J., Jhangiani, S. N., Joshi, V., Khan, Z. M., Kirkness, E. F., Cree, A., Fowler, R. G., Lee, S., Lewis, L. R., Li, Z., Liu, Y.-S., Moore, S. M., Muzny, D., Nazareth, L. V., Ngo, D. N., Okwuonu, G. O., Pai, G., Parker, D., Paul, H. A., Pfannkoch, C., Pohl, C. S., Rogers, Y.-H., Ruiz, S. J., Sabo, A., Santibanez, J., Schneider, B. W., Smith, S. M., Sodergren, E., Svatek, A. F., Utterback, T. R., Vattathil, S., Warren, W., White, C. S., Chinwalla, A. T., Feng, Y., Halpern, A. L., Hillier, L. W., Huang, X., Minx, P., Nelson, J. O., Pepin, K. H., Qin, X., Sutton, G. G., Venter, E., Walenz, B. P., Wallis, J. W., Worley, K. C., Yang, S.-P., Jones, S. M., Marra, M. A., Rocchi, M., Schein, J. E., Baertsch, R., Clarke, L., Csürös, M., Glasscock, J., Harris, R. A., Havlak, P., Jackson, A. R., Jiang, H., Liu, Y., Messina, D. N., Shen, Y., Song, H. X.-Z., Wylie, T., Zhang, L., Birney, E., Han, K., Konkel, M. K., Lee, J., Smit, A. F. A., Ullmer, B., Wang, H., Xing, J., Burhans, R., Cheng, Z., Karro, J. E., Ma, J., Raney, B., She, X., Cox, M. J., Demuth, J. P., Dumas, L. J., Han, S.-G., Hopkins, J., Karimpour-Fard, A., Kim, Y. H., Pollack, J. R., Vinar, T., Addo-Quaye, C., Degenhardt, J., Denby, A., Hubisz, M. J., Indap, A., Kosiol, C., Lahn, B. T., Lawson, H. A., Marklein, A., Nielsen, R., Vallender, E. J., Clark, A. G., Ferguson, B., Hernandez, R. D., Hirani, K., Kehrer-Sawatzki, H., Kolb, J., Patil, S., Pu, L.-L., Ren, Y., Smith, D. G., Wheeler, D. A., Schenck, I., Ball, E. V., Chen, R., Cooper, D. N., Giardine, B., Hsu, F., Kent, W. J., Lesk, A., Nelson, D. L., O'Brien, W. E., Prüfer, K., Stenson, P. D., Wallace, J. C., Ke, H., Liu, X.-M., Wang, P., Xiang, A. P., Yang, F., Barber, G. P., Haussler, D., Karolchik, D., Kern, A. D., Kuhn, R. M., Smith, K. E., & Zwieg, A. S.
Affiliations: Texas Biomedical Research Institute (US)
Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
ORCID: Gibbs, Richard A.
Rogers, Jeffrey
Bumgarner, Roger
Weinstock, George M.
Mardis, Elaine R.
Venter, J. Craig
Wilson, Richard K.
Batzer, Mark A.
Bustamante, Carlos D.
Eichler, Evan E.
Hahn, Matthew W.
Hardison, Ross C.
Makova, Kateryna D.
Milosavljevic, Aleksandar
Palermo, Robert E.
Siepel, Adam
Sikela, James M.
Ding, Yan
Dinh, Huyen H.
Hernandez, Judith
Jhangiani, Shalini N.
Khan, Ziad Mohid
Muzny, Donna
Pohl, Craig S.
Sabo, Aniko
Sodergren, Erica
Vattathil, Selina
Warren, Wesley
Chinwalla, Asif T.
Feng, Yucheng
Halpern, Aaron L.
Huang, Xiaoqiu
Nelson, Joanne O.
Pepin, Kymberlie H.
Qin, Xiang
Walenz, Brian P.
Worley, Kim C.
Marra, Marco A.
Rocchi, Mariano
Baertsch, Robert
Clarke, Laura
Glasscock, Jarret
Harris, R. Alan
Liu, Yue
Messina, David N.
Shen, Yufeng
Wylie, Todd
Zhang, Lan
Birney, Ewan
Han, Kyudong
Konkel, Miriam K.
Lee, Jungnam
Smit, Arian F. A.
Ullmer, Brygg
Wang, Hui
Xing, Jinchuan
Ma, Jian
Raney, Brian
Demuth, Jeffery P.
Dumas, Laura J.
Pollack, Jonathan R.
Hubisz, Melissa J.
Indap, Amit
Kosiol, Carolin
Lahn, Bruce T.
Lawson, Heather A.
Marklein, Alison
Nielsen, Rasmus
Vallender, Eric J.
Clark, Andrew G.
Ferguson, Betsy
Hernandez, Ryan D.
Ren, Yanru
Smith, David Glenn
Wheeler, David A.
Chen, Rui
Cooper, David N.
Giardine, Belinda
Lesk, Arthur
Nelson, David L.
Wallace, James C.
Wang, Peng
Xiang, Andy Peng
Yang, Fan
Haussler, David
Kuhn, Robert M.
Venue: Science
Publisher: American Association for the Advancement of Science (AAAS)
Published: 2007-04-13
Volume: 316
Issue: 5822
Pages: 222-234
ISSN: 0036-8075 (ISSN-L)
1095-9203
DOI: 10.1126/science.1139247
OpenAlex: W2125548284
Cited by: 1,403
References: 69
Citations by year: 2026: 28 · 2025: 51 · 2024: 34 · 2023: 63 · 2022: 69 · 2021: 69 · 2020: 53 · 2019: 50 · 2018: 59 · 2017: 46 · 2016: 51 · 2015: 73 · 2014: 74 · 2013: 78 · 2012: 98
FWCI: 52.32
Type: journal article
Language: en
Open access: green
digitalcommons.lsu.edu
Locations: Science (publishedVersion)
PubMed (publishedVersion)
Cold Spring Harbor Laboratory Institutional Repository (Cold Spring Harbor Laboratory) (acceptedVersion)
Civil War Book Review (submittedVersion)
Max Planck Institute for Plasma Physics (submittedVersion)
Research at the University of Copenhagen (University of Copenhagen) (submittedVersion)
MPG.PuRe (Max Planck Society) (submittedVersion)
CINECA IRIS Institutional Research Information System (University of Bari Aldo Moro) (submittedVersion)
Funders: Wellcome Trust (062023)
National Human Genome Research Institute (U54HG003068, U54HG003079, R01HG002939)
Topics: Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Chromosomal and Genetic Variations
Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Primate Behavior and Ecology
Keywords: rhesus monkeys, genome sequence, comparative genomics, primate evolution, positive selection, gene family expansion and contraction, genetic diversity, nonhuman primate model
MeSH terms: Animals, Pan troglodytes, Female, Multigene Family, Humans, Macaca mulatta, Male, Mutation, Species Specificity, Genetic Variation, Gene Rearrangement, Genome, Sequence Analysis, DNA, Evolution, Molecular, Gene Duplication, Genetic Diseases, Inborn, Biomedical Research

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

Evolutionary and biomedical insights from the rhesus macaque genome.

Abstract

Overview

Integrity signals

Verification

Claims the paper makes

Claims other papers make about this one

Self-check

Citations

Cites

Cited by

Related

Metadata

Record

About these checks