High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

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Septin‐associated proteins Aim44 and Nis1 traffic between the bud neck and the nucleus in the yeast Saccharomyces cerevisiae

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Predicted networks of protein-protein interactions in Stegodyphus mimosarum by cross-species comparisons

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Sensitive Readout for Microfluidic High-Throughput Applications using Scanning SQUID Microscopy

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Feature Fusion Based Subgraph Classification for Link Prediction

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Oxidative Stress Responses and Nutrient Starvation in MCHM Treated Saccharomyces cerevisiae

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Vir1p, the yeast homolog of virilizer, is required for mRNA m6A methylation and meiosis

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Reconstructing Genome-Wide Protein–Protein Interaction Networks Using Multiple Strategies with Homologous Mapping

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Cliques in mitotic spindle network bring kinetochore‐associated complexes to form dependence pathway

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Link Prediction Using BenefitRanks in Weighted Networks

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The Mpn1 RNA exonuclease: Cellular functions and implication in disease

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Identification of Human Protein Interaction Domains using an ORFeome-based Yeast Two-hybrid Fragment Library

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Toward a more nuanced understanding of long-tail distributions and their generative process in entrepreneurship

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TORC2-Dependent Ypk1-Mediated Phosphorylation of Lam2/Ltc4 Disrupts Its Association with the β-Propeller Protein Laf1 at Endoplasmic Reticulum-Plasma Membrane Contact Sites in the Yeast Saccharomyces cerevisiae

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Protein Interaction Networks: Protein Domain Interaction and Protein Function Prediction

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Protein-Protein Interaction Prediction via Graph Signal Processing

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Using machine learning techniques and genomic/proteomic information from known databases for defining relevant features for PPI classification

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Link Prediction Using BenefitRanks in Weighted Networks

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Random Mutagenesis MAPPIT Analysis Identifies Binding Sites for Vif and Gag in Both Cytidine Deaminase Domains of Apobec3G

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The severity of mental disorders is linked to interaction among candidate genes

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Investigating the impact human protein–protein interaction networks have on disease-gene analysis

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Use of the Yeast Two-Hybrid System to Identify Targets of Fungal Effectors

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Visualization of the interactome: What are we looking at?

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Assigning Confidence Scores to Protein–Protein Interactions

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Docking-based modeling of protein-protein interfaces for extensive structural and functional characterization of missense mutations

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Pby1 is a direct partner of the Dcp2 decapping enzyme

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A review of phosphatidate phosphatase assays

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PRIMOS: An Integrated Database of Reassessed Protein–Protein Interactions Providing Web-Based Access to In Silico Validation of Experimentally Derived Data

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Decomposing protein interactome networks by graph entropy

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A two-step framework for inferring direct protein-protein interaction network from AP-MS data

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INTERSPIA: a web application for exploring the dynamics of protein-protein interactions among multiple species

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PPI network analyses of human WD40 protein family systematically reveal their tendency to assemble complexes and facilitate the complex predictions

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Collective influencers in protein interaction networks

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Using yeast two-hybrid system and molecular dynamics simulation to detect venom protein-protein interactions

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Spectral density of random graphs: convergence properties and application in model fitting

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Ortho_Sim_Loc: Essential protein prediction using orthology and priority-based similarity approach

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Sir3 heterochromatin protein promotes non‐homologous end joining by direct inhibition of Sae2

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The Topology of the Growing Human Interactome Data

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Yeast Irc6p is a novel type of conserved clathrin coat accessory factor related to small G proteins

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Sequence correlations shape protein promiscuity

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Genomic Resources of Magnaporthe oryzae (GROMO): A comprehensive and integrated database on rice blast fungus

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Interaction networks: Lessons from large‐scale studies in yeast

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Reconstruction of the yeast protein-protein interaction network involved in nutrient sensing and global metabolic regulation

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High Throughput Analyses of Budding Yeast ARSs Reveal New DNA Elements Capable of Conferring Centromere-Independent Plasmid Propagation

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Slx5/Slx8‐dependent ubiquitin hotspots on chromatin contribute to stress tolerance

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Correction: Systematic Two-Hybrid and Comparative Proteomic Analyses Reveal Novel Yeast Pre-mRNA Splicing Factors Connected to Prp19

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A novel strategy for dynamic modeling of genome-scale interaction networks

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Improved Link Prediction Method for Maritime Silk Road Shipping Network Using Composite Index

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Computational tools to predict context-specific protein complexes

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Next-Generation Yeast Two-Hybrid Screening to Discover Protein–Protein Interactions

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Topological Characteristics of Molecular Networks

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Functional genomics in the study of yeast cell polarity: moving in the right direction

Styles, E. B., Youn, J., Ušaj, M. M., & Andrews, B. (2013) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2013.0118 · Cited by 9

Scoring Function Based on Weighted Residue Network

Jiao, X., & Chang, S. (2011) · International Journal of Molecular Sciences · doi:10.3390/ijms12128773 · Cited by 9

FRep: A Fluorescent Protein-Based Bioprobe for in Vivo Detection of Protein–DNA Interactions

Shahravan, S. H., Li, I. T. S., Truong, K., & Shin, J. A. (2011) · Analytical Chemistry · doi:10.1021/ac2024602 · Cited by 9

Latent Model-Based Clustering for Biological Discovery

Bing, X., Bunea, F., Royer, M., & Das, J. (2018) · iScience · doi:10.1016/j.isci.2019.03.018 · Cited by 9

The connectivity of graphs of graphs with self-loops and a given degree sequence

Nishimura, J. (2018) · Journal of Complex Networks · doi:10.1093/comnet/cny008 · Cited by 9

Mapping and characterization of protein interactome networks

Desbuleux, A. (2019) · ORBi (University of Liège)

Yeast two-hybrid contributions to interactome mapping

Parrish, J. R., Gulyas, K. D., & Finley, R. L. (2006) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2006.06.006 · Cited by 247

A comprehensive two-hybrid analysis to explore the yeast protein interactome

Ito, T., Chiba, T., Ozawa, R., Yoshida, M., Hattori, M., & Sakaki, Y. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.061034498 · Cited by 3,566

A pipeline for systematic yeast 2-hybrid matricial screening in liquid culture.Preprint

Monachello, D., Damien, G., & Claire Lurin, A. (2019) · doi:10.21203/rs.2.9948/v1 · Cited by 5

An empirical framework for binary interactome mapping

Venkatesan, K., Rual, J.-F. M., Vázquez, A., Stelzl, U., Lemmens, I. H., Hirozane-Kishikawa, T., Hao, T., Zenkner, M., Xin, X., Goh, K. I., et al. (2008) · Nature Methods · doi:10.1038/nmeth.1280 · Cited by 925