Cited by 394Liver physiology and pathologyOrgan Transplantation Techniques and OutcomesTissue Engineering and Regenerative Medicine

Cholangiocyte organoids can repair bile ducts after transplantation in the human liver

Open access
Sampaziotis, Fotios, Muraro, Daniele, Tysoe, Olivia C., Sawiak, Stephen, Beach, Timothy E., Godfrey, Edmund M., Upponi, Sara S., Brevini, Teresa +32 more·2021·Science

Abstract

Organoids regenerate human bile ducts: Bile ducts carry bile from the liver and gall bladder to the small intestine, where it aids digestion. Cholangiocytes are epithelial cells that line bile ducts and modify bile as its transported through the biliary tree. Chronic liver diseases involving cholangiocytes account for a large fraction of liver failure and the need for liver transplantation. Because liver donors are in short supply, Sampaziotis et al. used organoid technology to develop a cell-based therapy using human tissue (see the Perspective by Kurial and Willenbring). Cholangiocyte organoids were transplanted into the intrahepatic ducts of deceased human donor livers undergoing ex vivo normothermic perfusion. The livers could be maintained for up to 100 hours, and the transplanted organoids engrafted, exhibited function, and could repair bile ducts. Science , this issue p. 839 ; see also p. 786

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Crossref · 10.1126/science.aaz6964

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Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Undefined ECMs such as Matrigel suffer from unknown composition and batch-to-batch variability, making reproducibility a significant concern.

    “Similarly, undefined ECMs (e.g. Matrigel) suffer from their unknown composition and batch to batch variability, making reproducibility a significant concern13,205.”

    From Organoids (2022) · cites this paper as [205]

    The organoid derivation and culture passage (Analysis of normalized 10X data; page unavailable) says the cells were cultured under the same conditions, but does not address the composition or variability of the matrix. Searches for Matrigel, batch-to-batch variability, and ECM reproducibility found no passage in our copy supporting the attributed concern. (LLM, conf=0.73)

    Experimental — accuracy not yet measured
  • There are two main paths to overcome the use of non-specific ECM such as Matrigel: synthetic matrices with more complete control over composition and stiffness, and decellularized tissue to create tissue-specific matrices.

    “There are two main paths to overcome the use of non-specific ECM such as Matrigel: one is the use of synthetic matrices with more complete control over composition and stiffness, and the other is to take decellularized tissue and create tissue-specific matrices205,243.”

    From Organoids (2022) · cites this paper as [205]

    The Main text discusses how environmental cues affect cholangiocyte organoids, while the ‘Organoid derivation and culture’ passage says they were grown using an established method. Neither passage addresses two alternatives to Matrigel. Searches for synthetic matrices, stiffness, Matrigel, and decellularized tissue found no passage supporting the attributed claim. (LLM, conf=0.76)

    Experimental — accuracy not yet measured
  • Gallbladder-derived cholangiocyte organoids have been shown to engraft in the intrahepatic biliary tree after injection into deceased transplant donor livers and prevent ischemic injury while the organ is under machine perfusion.

    “For example, gallbladder-derived cholangiocyte organoids have been shown to engraft in the intrahepatic biliary tree after injection into deceased transplant donor livers and prevent ischemic injury while the organ is under machine perfusion, which represents a promising example of ex vivo cell-based therapy [164].”

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Research works printed but not linked: 3

  1. R. G. Farmer, W. A. Hawk, R. B. Turnbull, Farmer, R. G., Hawk, W. A. and Turnbull, R. B. (1975) 'Clinical patterns in Crohn's disease: a statistical study of 615 cases.', Gastroenterology, 68(4 Pt 1), pp. 627-35. Available at: http://www.ncbi.nlm.nih.gov/pubmed/1123132 (Accessed: 11 September 201. Gastroenterology. 68, 627-35 (1975).
  2. S. A. MacParland, J. C. Liu, X. Z. Ma, B. T. Innes, A. M. Bartczak, B. K. Gage, J. Manuel, N. Khuu, J. Echeverri, I. Linares, R. Gupta, M. L. Cheng, L. Y. Liu, D. Camat, S. W. Chung, R. K. Seliga, Z. Shao, E. Lee, S. Ogawa, M. Ogawa, M. D. Wilson, J. E. Fish, M. Selzner, A. Ghanekar, D. Grant, P. Greig, G. Sapisochin, N. Selzner, N. Winegarden, O. Adeyi, G. Keller, G. D. Bader, I. D. McGilvray, Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations. Nat. Commun. 9, 4383 (2018).
  3. L. Zappia, A. Oshlack, Clustering trees: a visualization for evaluating clusterings at multiple resolutions. Gigascience. 7 (2018), doi:10.1093/gigascience/giy083. · DOI · Paper page

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Authors
Sampaziotis, F., Muraro, D., Tysoe, O. C., Sawiak, S., Beach, T. E., Godfrey, E. M., Upponi, S. S., Brevini, T., Wesley, B. T., Garcia-Bernardo, J., Mahbubani, K., Canu, G., Gieseck, R., Berntsen, N. L., Mulcahy, V. L., Crick, K., Fear, C., Robinson, S., Swift, L., Gambardella, L., Bargehr, J., Ortmann, D., Brown, S. E., Osnato, A., Murphy, M. P., Corbett, G., Gelson, W. T. H., Mells, G. F., Humphreys, P., Davies, S. E., Amin, I., Gibbs, P., Sinha, S., Teichmann, S. A., Butler, A. J., See, T. C., Melum, E., Watson, C. J. E., Saeb-Parsy, K., & Vallier, L.
Affiliations
  • Wellcome/MRC Cambridge Stem Cell Institute (GB)
  • University of Cambridge (GB)
  • Cambridge University Hospitals NHS Foundation Trust (GB)
  • Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, UK.
  • National Institutes of Health (US)
  • Oslo University Hospital (NO)
  • NHS Blood and Transplant (GB)
  • Department of Surgery, University of Cambridge and NIHR Cambridge Biomedical Research Centre, Cambridge, Cambridgeshire, UK.
Corresponding author
  • Sampaziotis, Fotios
  • Vallier, Ludovic
Venue
Science
Published
2021-02-19
Volume
371
Issue
6531
Pages
839-846
ISSN
  • 0036-8075 (ISSN-L)
  • 1095-9203
OpenAlex
W3129440616
Cited by
394
References
7
Citations by year
2026: 63 · 2025: 79 · 2024: 87 · 2023: 56 · 2022: 67 · 2021: 42
FWCI
34.97
Type
journal article
Language
en
Open access
Locations
  • Science (publishedVersion)
  • PubMed (publishedVersion)
  • PubMed Central (acceptedVersion)
  • Apollo (University of Cambridge) (submittedVersion)
  • UCL Discovery (University College London) (submittedVersion)
  • Apollo
Funders
  • Medical Research Council
  • National Institute for Health Research
  • British Heart Foundation
  • Academy of Medical Sciences
  • European Research Council
  • Rosetrees Trust
  • Addenbrooke's Charitable Trust, Cambridge University Hospitals
  • European Association for the Study of the Liver
  • Wellcome Trust Centre for Mitochondrial Research
  • Cambridge University Hospitals National Institute for Health Research Biomedical Research Centre
Topics
  • Health Sciences › Medicine › Hepatology › Liver physiology and pathology
  • Health Sciences › Medicine › Surgery › Organ Transplantation Techniques and Outcomes
  • Health Sciences › Medicine › Surgery › Tissue Engineering and Regenerative Medicine
Keywords
cholangiocyte organoids, cholangiopathy, liver transplantation, cholangiocytes, transcriptional diversity, single-cell RNA sequencing, ex vivo normothermic perfusion, cell engraftment, regenerative medicine
MeSH terms
RNA-Seq, Animals, Bile, Bile Duct Diseases, Bile Ducts, Bile Ducts, Intrahepatic, Common Bile Duct, Epithelial Cells, Gallbladder, Gene Expression Regulation, Humans, Liver, Tissue and Organ Procurement, Organoids, Liver Transplantation, Mesenchymal Stem Cell Transplantation, Mice, Transcriptome, Cell- and Tissue-Based Therapy

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