Cited by 301Genomics and Rare DiseasesMetabolism and Genetic DisordersArtificial Intelligence in Healthcare and Education

Diagnosis of genetic diseases in seriously ill children by rapid whole-genome sequencing and automated phenotyping and interpretation

Open access
Clark, Michelle M., Hildreth, Amber, Batalov, Sergey, Ding, Yan, Chowdhury, Shimul, Watkins, Kelly, Ellsworth, Katarzyna, Camp, Brandon +53 more·2019·Science Translational Medicine

Abstract

Automated phenotyping and interpretation of rapid whole-genome sequencing improve time to diagnosis of genetic diseases in hospitalized children.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1126/scitranslmed.aat6177

Cites

68 of 68 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 2

  1. [7]Committee on Approaching Death: Addressing Key End of Life Issues; Institute of Medicine, in Dying in America: Improving Quality and Honoring individual Preferences Near the End of Life (National Academies Press, 2015), chap. Appendix F Pediatric End-of-Life and Palliative Care: Epidemiology and Health Service Use. 25927121
  2. [15]National Center for Biotechnology Information, National Library of Medicine, Database of Single Nucleotide Polymorphisms (dbSNP) (2018); www.ncbi.nlm.nih.gov/dbvar?term=(%22clin%20pathogenic%22%5BFilter%5D)%20AND%20homo%20sapiens%5BOrganism%5D.

Cited by

Sorted by citations

Authors
Clark, M. M., Hildreth, A., Batalov, S., Ding, Y., Chowdhury, S., Watkins, K., Ellsworth, K., Camp, B., Kint, C. I., Yacoubian, C., Farnaes, L., Bainbridge, M. N., Beebe, C., Braun, J. J. A., Bray, M., Carroll, J., Cakici, J. A., Caylor, S. A., Clarke, C., Creed, M. P., Friedman, J., Frith, A., Gain, R., Gaughran, M., George, S., Gilmer, S., Gleeson, J., Gore, J., Grunenwald, H., Hovey, R. L., Janes, M. L., Lin, K., McDonagh, P. D., McBride, K., Mulrooney, P., Nahas, S., Oh, D., Oriol, A., Puckett, L., Rady, Z., Reese, M. G., Ryu, J., Salz, L., Sanford, E., Stewart, L., Sweeney, N., Tokita, M., Van Der Kraan, L., White, S., Wigby, K., Williams, B., Wong, T., Wright, M. S., Yamada, C., Schols, P., Reynders, J., Hall, K., Dimmock, D., Veeraraghavan, N., Defay, T., & Kingsmore, S. F.
Affiliations
  • Rady Children's Institute for Genomic Medicine (US)
  • University of Washington (US)
  • Rady Children’s Institute for Genomic Medicine, San Diego, CA 92123, USA.
  • Diploid, 3001 Leuven, Belgium.
  • Clinithink Ltd., London N1 6DR, UK.
  • University of California San Diego (US)
  • GenomeDesigns Lab (United States) (US)
  • Rady Children's Hospital-San Diego (US)
  • Alexion Pharmaceuticals (United States) (US)
  • University of Kansas (US)
  • Tessella, Needham, MA 02494, USA.
  • Illumina (United States) (US)
  • Ontario Genomics (CA)
Corresponding author
Kingsmore, Stephen F.
Venue
Science Translational Medicine
Published
2019-04-24
Volume
11
Issue
489
ISSN
  • 1946-6234 (ISSN-L)
  • 1946-6242
OpenAlex
W2942272601
Cited by
300
References
68
Citations by year
2026: 27 · 2025: 39 · 2024: 25 · 2023: 40 · 2022: 57 · 2021: 44 · 2020: 51 · 2019: 17
FWCI
25.38
Type
journal article
Language
en
Open access
Locations
  • Science Translational Medicine (publishedVersion)
  • PubMed (publishedVersion)
  • PubMed Central (acceptedVersion)
  • eScholarship (California Digital Library) (submittedVersion)
Funders
National Institutes of Health (u19hd077693, UL1TR002550, U01TR002271)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomics and Rare Diseases
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Clinical Biochemistry › Metabolism and Genetic Disorders
  • Health Sciences › Medicine › Health Informatics › Artificial Intelligence in Healthcare and Education
Keywords
genetic disease diagnosis, whole genome sequencing, automated phenotyping, natural language processing, electronic health records, neonatal intensive care, pediatric intensive care, critically ill infants, rapid sequencing, precision medicine
MeSH terms
Female, Humans, Intensive Care Units, Natural Language Processing, Retrospective Studies, Diabetic Ketoacidosis, Genomics, Electronic Health Records

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review