Molecular analysis of oral and respiratory bacterial species associated with ventilator-associated pneumonia.
Open accessAbstract
Trauma intensive care unit (TICU) patients requiring mechanical respiratory support frequently develop ventilator-associated pneumonia (VAP). Oral and oropharyngeal bacteria are believed to be responsible for many cases of VAP, but definitive evidence of this relationship is lacking. Earlier studies used conventional culture-based methods for identification of bacterial pathogens, but these methods are insufficient, as some bacteria may be uncultivable or difficult to grow. The purpose of this study was to use a culture-independent molecular approach to analyze and compare the bacterial species colonizing the oral cavity and the lungs of TICU patients who developed VAP. Bacterial samples were acquired from the dorsal tongue and bronchoalveolar lavage fluid of 16 patients. Bacterial DNA was extracted, and the 16S rRNA genes were PCR amplified, cloned into Escherichia coli, and sequenced. The sequencing data revealed the following: (i) a wide diversity of bacterial species in both the oral and pulmonary sites, some of them novel; (ii) known and putative respiratory pathogens colonizing both the oral cavity and lungs of 14 patients; and (iii) a number of bacterial pathogens (e.g., Dialister pneumosintes, Haemophilus segnis, Gemella morbillorum, and Pseudomonas fluorescens) in lung samples that had not been reported previously at this site when culture-based methods were used. Our data indicate that the dorsal surface of the tongue serves as a potential reservoir for bacterial species involved in VAP. Furthermore, it is clear that the diversity of bacterial pathogens for VAP is far more complex than the current literature suggests.
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Several members of the oral microbiota (e.g., Streptococcus oralis, Prevotella salivae, and Mycoplasma salivarium) have previously been detected by 16S rRNA gene analysis in the BALF samples of VAP patients.
“Several members of the oral microbiota (e.g., Streptococcus oralis, Prevotella salivae, and Mycoplasma salivarium) have previously been detected by 16S rRNA gene analysis in the BALF samples of VAP patients (Bahrani-Mougeot et al., 2007).”
From Oral Microbiome and SARS-CoV-2: Beware of Lung Co-infection (2020) · cites this paper as Bahrani-Mougeot et al., 2007
The main pathophysiologic mechanism for VAP development is oropharyngeal colonization.
“Many studies have reported that the main pathophysiologic mechanism for VAP development is oropharyngeal colonization (Doré et al., 1996; Bahrani-Mougeot et al., 2007).”
From Oral Microbiome and SARS-CoV-2: Beware of Lung Co-infection (2020) · cites this paper as Bahrani-Mougeot et al., 2007
In critically ill patients, healthy oral microbiota are displaced by gram-negative aerobes, including prominent members of the Proteobacteria phylum.
“in critically ill patients, healthy oral microbiota are displaced by gram-negative aerobes (figure 1), including prominent members of the Proteobacteria phylum”
From The microbiome and critical illness (2016) · cites this paper as [7]
The oropharynx in critical illness becomes overrun by potentially pathogenic bacteria, including prominent Proteobacteria such as P aeruginosa and K pneumoniae.
“becomes overrun by potentially pathogenic bacteria, including prominent Proteobacteria, such as P aeruginosa and K pneumoniae.”
From The microbiome and critical illness (2016) · cites this paper as [7]
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The neighbor-joining method: a new method for reconstructing phylogenetic trees.
Saitou, N., & Nei, M. (1987) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a040454 · Cited by 59,962 · see citing works
Evolution of Protein Molecules
JUKES, T. H., & CANTOR, C. R. (1969) · Mammalian Protein Metabolism · doi:10.1016/b978-1-4832-3211-9.50009-7 · Cited by 11,032 · see citing works
(1964) · Elsevier eBooks · doi:10.1016/b978-1-4832-3210-2.50006-6 · Cited by 3,130 · see citing works
Ventilator-associated Pneumonia
Chastre, J. E., & Fagon, J.-Y. (2002) · American Journal of Respiratory and Critical Care Medicine · doi:10.1164/ajrccm.165.7.2105078 · Cited by 2,884 · see citing works
de Peer, Y. V., & Wächter, R. D. (1994) · Computer applications in the biosciences · doi:10.1093/bioinformatics/10.5.569 · Cited by 2,272 · see citing works
Bacterial Diversity in Human Subgingival Plaque
Paster, B. J., Boches, S. K., Galvin, J. L., Ericson, R. E., Lau, C. N., Levanos, V. A., Sahasrabudhe, A., & Dewhirst, F. E. (2001) · Journal of Bacteriology · doi:10.1128/jb.183.12.3770-3783.2001 · Cited by 2,008 · see citing works
Self-citationLeVine, A. M., Kurak, K. E., Wright, J. R., Watford, W. T., Bruno, M. D., Ross, G. F., Whitsett, J. A., & Korfhagen, T. R. (1999) · American Journal of Respiratory Cell and Molecular Biology · doi:10.1165/ajrcmb.20.2.3303 · Cited by 1,272 · see citing works
Changing Pharyngeal Bacterial Flora of Hospitalized Patients: Emergence of Gram-Negative Bacilli
Johanson, W. G., Pierce, A. K., & Sanford, J. P. (1969) · New England Journal of Medicine · doi:10.1056/nejm196911202812101 · Cited by 910 · see citing works
Invasive and Noninvasive Strategies for Management of Suspected Ventilator-Associated Pneumonia
Fagon, J.-Y., Chastre, J. E., Wolff, M., Gervais, C., Parer, S., Stéphan, F., Similowski, T., Mercat, A., Diehl, J., Sollet, J.-P., et al. (2000) · Annals of Internal Medicine · doi:10.7326/0003-4819-132-8-200004180-00004 · Cited by 844 · see citing works
Fagon, J.-Y., Chastre, J. E., Domart, Y., Trouillet, J., Pierre, J., Darne, C., & Gibert, C. (1989) · American Review of Respiratory Disease · doi:10.1164/ajrccm/139.4.877 · Cited by 819 · see citing works
Bacterial diversity within the human subgingival crevice
Kroes, I., Lepp, P. W., & Relman, D. A. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.25.14547 · Cited by 606 · see citing works
Kazor, C. E., Mitchell, P. M., Lee, A. M., Stokes, L. N., Loesche, W. J., Dewhirst, F. E., & Paster, B. J. (2003) · Journal of Clinical Microbiology · doi:10.1128/jcm.41.2.558-563.2003 · Cited by 533 · see citing works
Self-citationThe Prevention of Ventilator-Associated Pneumonia
Kollef, M. H. (1999) · New England Journal of Medicine · doi:10.1056/nejm199902253400807 · Cited by 508 · see citing works
Factors Predisposing to Oropharyngeal Colonization with Gram-Negative Bacilli in the Aged
Valenti, W. M., Trudell, R. G., & Bentley, D. W. (1978) · New England Journal of Medicine · doi:10.1056/nejm197805182982002 · Cited by 415 · see citing works
Colonization of dental plaque by respiratory pathogens in medical intensive care patients
Scannapieco, F. A., Stewart, E., & Mylotte, J. M. (1992) · Critical Care Medicine · doi:10.1097/00003246-199206000-00007 · Cited by 384 · see citing works
Scannapieco, F. A., & Ho, A. W. (2001) · Journal of Periodontology · doi:10.1902/jop.2001.72.1.50 · Cited by 296 · see citing works
Colonization of dental plaque: A source of nosocomial infections in intensive care unit patients
Fourrier, F., Duvivier, B., Boutigny, H., Roussel‐Delvallez, M., & Chopin, C. (1998) · Critical Care Medicine · doi:10.1097/00003246-199802000-00032 · Cited by 292 · see citing works
Oropharyngeal or Gastric Colonization and Nosocomial Pneumonia in Adult Intensive Care Unit Patients
Garrouste-Orgeas, M., Chevret, S., Arlet, G., MARIE, O., Rouveau, M., POPOFF, N., & Schlemmer, B. (1997) · American Journal of Respiratory and Critical Care Medicine · doi:10.1164/ajrccm.156.5.96-04076 · Cited by 292 · see citing works
Pneumonia in Intubated Trauma Patients. Microbiology and Outcomes
Baker, A. M., Meredith, J. W., & Haponik, E. F. (1996) · American Journal of Respiratory and Critical Care Medicine · doi:10.1164/ajrccm.153.1.8542141 · Cited by 250 · see citing works
Paster, B. J., & Dewhirst, F. E. (1988) · International Journal of Systematic Bacteriology · doi:10.1099/00207713-38-1-56 · Cited by 215 · see citing works
Self-citationPrevalent Bacterial Species and Novel Phylotypes in Advanced Noma Lesions
Paster, B. J., Falkler, W. A., Enwonwu, C. O., Idigbe, E., Savage, K., Levanos, V. A., Tamer, M. A., Ericson, R. L., Lau, C. N., & Dewhirst, F. E. (2002) · Journal of Clinical Microbiology · doi:10.1128/jcm.40.6.2187-2191.2002 · Cited by 152 · see citing works
Self-citationIncidence of anaerobes in ventilator-associated pneumonia with use of a protected specimen brush.
Doré, P., Robert, R., Grollier, G., Rouffineau, J., Lanquetot, H., Charrière, J. M., & Fauchère, J. L. (1996) · American Journal of Respiratory and Critical Care Medicine · doi:10.1164/ajrccm.153.4.8616556 · Cited by 129 · see citing works
Bacterial Diversity in Necrotizing Ulcerative Periodontitis in HIV‐Positive Subjects
Paster, B. J., Russell, M. K., Alpagot, T., Lee, A. M., Boches, S. K., Galvin, J. L., & Dewhirst, F. E. (2002) · Annals of Periodontology · doi:10.1902/annals.2002.7.1.8 · Cited by 107 · see citing works
Self-citationThe role of oral microbial colonization in ventilator-associated pneumonia
Brennan, M. T., Bahrani‐Mougeot, F. K., Fox, P. C., Kennedy, T. P., Hopkins, S., Boucher, R. C., & Lockhart, P. B. (2004) · Oral Surgery Oral Medicine Oral Pathology Oral Radiology and Endodontology · doi:10.1016/j.tripleo.2004.06.005 · Cited by 63 · see citing works
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Flagged first, then by citations
1 of the 25 references couldn’t be matched to a known paper.
Cited by
Sorted by citations
Dewhirst, F. E., Chen, T., Izard, J., Paster, B. J., Tanner, A. C. R., Yu, W.-H., Lakshmanan, A., & Wade, W. G. (2010) · Journal of Bacteriology · doi:10.1128/jb.00542-10 · Cited by 3,352 · see citing works
Self-citationInterspecies Interactions within Oral Microbial Communities
Kuramitsu, H. K., He, X., Lux, R., Anderson, M. H., & Shi, W. (2007) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00024-07 · Cited by 595 · see citing works
The microbiome and critical illness
Dickson, R. P. (2016) · The Lancet Respiratory Medicine · doi:10.1016/s2213-2600(15)00427-0 · Cited by 460 · see citing works
Historical evolution and current status of the taxonomy of genus Pseudomonas
Péix, Á., Ramírez-Bahena, M.-H., & Velázquez, E. (2009) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2009.08.001 · Cited by 324 · see citing works
Scales, B. S., Dickson, R. P., LiPuma, J. J., & Huffnagle, G. B. (2014) · Clinical Microbiology Reviews · doi:10.1128/cmr.00044-14 · Cited by 303 · see citing works
Nørskov‐Lauritsen, N. (2014) · Clinical Microbiology Reviews · doi:10.1128/cmr.00103-13 · Cited by 262 · see citing works
Regulation of host-microbe interactions at oral mucosal barriers by type 17 immunity
Gaffen, S., & Moutsopoulos, N. (2020) · Science immunology · doi:10.1126/sciimmunol.aau4594 · Cited by 230 · see citing works
Molecular Detection of Multiple Emerging Pathogens in Sputa from Cystic Fibrosis Patients
Bittar, F., Richet, H., Dubus, J. ‐., Reynaud‐Gaubert, M., Stremler, N., Sarles, J., Raoult, D., & Rolain, J. (2008) · PLoS ONE · doi:10.1371/journal.pone.0002908 · Cited by 223 · see citing works
Oral Microbiome and SARS-CoV-2: Beware of Lung Co-infection
Bao, L., Zhang, C., Dong, J., Zhao, L., Li, Y., & Sun, J. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.01840 · Cited by 207 · see citing works
Dickson, R. P., Erb‐Downward, J. R., Freeman, C. M., Walker, N., Scales, B. S., Beck, J. M., Martínez, F. J., Curtis, J. L., Lama, V. N., & Huffnagle, G. B. (2014) · PLoS ONE · doi:10.1371/journal.pone.0097214 · Cited by 203 · see citing works
Heo, S., Haase, E. M., Lesse, A. J., Gill, S. R., & Scannapieco, F. A. (2008) · Clinical Infectious Diseases · doi:10.1086/593193 · Cited by 189 · see citing works
Dickson, R. P., Erb-Downward, J. R., Prescott, H. C., Martinez, F. J., Curtis, J. L., Lama, V. N., & Huffnagle, G. B. (2014) · Journal of Clinical Microbiology · doi:10.1128/jcm.01028-14 · Cited by 176 · see citing works
Jünger, M., Vautz, W., Kuhns, M., Hofmann, L. K., Ulbricht, S., Baumbach, J., Quintel, M., & Perl, T. (2012) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-012-3924-4 · Cited by 156 · see citing works
The nasal microbiome in asthma
Fazlollahi, M., Lee, T. D., Andrade, J. T., Oguntuyo, K. Y., Chun, Y., Grishina, G. T., Grishin, A. V., & Bunyavanich, S. (2018) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2018.02.020 · Cited by 137 · see citing works
Repertoire of intensive care unit pneumonia microbiota
Bousbia, S., Papazian, L., Saux, P., Forel, J. M., Auffray, J.-P., Martin, C., Raoult, D., & La Scola, B. (2012) · PLoS ONE · doi:10.1371/journal.pone.0032486 · Cited by 118 · see citing works
Tropheryma whippleiin Patients with Pneumonia
Bousbia, S., Papazian, L., Auffray, J., Fenollar, F., Martin, C., Li, W., Chiche, L., Scola, B. L., & Raoult, D. (2010) · Emerging infectious diseases · doi:10.3201/eid1602.090610 · Cited by 113 · see citing works
Zakharkina, T., Heinzel, E., Koczulla, R. A., Greulich, T., Rentz, K., Pauling, J. K., Baumbach, J., Herrmann, M., Grünewald, C., Dienemann, H., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0068302 · Cited by 108 · see citing works
Rafferty, B., Jönsson, D., Kalachikov, S., Demmer, R. T., Nowygrod, R., Elkind, M. S. V., Bush, H., & Kozarov, E. (2011) · Journal of Internal Medicine · doi:10.1111/j.1365-2796.2011.02373.x · Cited by 106 · see citing works
Sands, K. M., Wilson, M. J., Lewis, M. A. O., Wise, M. P., Palmer, N., Hayes, A. J., Barnes, R. A., & Williams, D. W. (2016) · Journal of Critical Care · doi:10.1016/j.jcrc.2016.07.019 · Cited by 103 · see citing works
Ventilator-associated pneumonia with or without toothbrushing: a randomized controlled trial
Lorente, L., Lecuona, M., Jiménez, A., Palmero, S., Pastor, E., Lafuente, N., Ramos, M. J. C., Mora, M. L., & Sierra, A. (2012) · European Journal of Clinical Microbiology & Infectious Diseases · doi:10.1007/s10096-012-1605-y · Cited by 101 · see citing works
Dysbiosis in the intensive care unit: Microbiome science coming to the bedside
Kitsios, G. D., Morowitz, M. J., Dickson, R. P., Huffnagle, G. B., McVerry, B. J., & Morris, A. (2016) · Journal of Critical Care · doi:10.1016/j.jcrc.2016.09.029 · Cited by 91 · see citing works
The Oral Microbiome and Lung Cancer Risk: An Analysis of 3 Prospective Cohort Studies
Vogtmann, E., Hua, X., Yu, G., Purandare, V., Hullings, A. G., Shao, D., Wan, Y., Li, S., Dagnall, C. L., Jones, K. M., et al. (2022) · JNCI Journal of the National Cancer Institute · doi:10.1093/jnci/djac149 · Cited by 88 · see citing works
Mosier, M. M., & Pham, T. N. (2009) · Journal of Burn Care & Research · doi:10.1097/bcr.0b013e3181bfb68f · Cited by 82 · see citing works
Colombo, A. V., Barbosa, G. M., Higashi, D., Micheli, G. D., Rodrigues, P. H. M., & Simionato, M. R. L. (2013) · Journal of Medical Microbiology · doi:10.1099/jmm.0.055830-0 · Cited by 85 · see citing works
Akata, K., Yatera, K., Yamasaki, K., Kawanami, T., Naito, K., Noguchi, S., Fukuda, K., Ishimoto, H., Taniguchi, H., & Mukae, H. (2016) · BMC Pulmonary Medicine · doi:10.1186/s12890-016-0235-z · Cited by 83 · see citing works
Molecular Analysis of Microbial Communities in Endotracheal Tube Biofilms
Cairns, S. A., Thomas, J. G., Hooper, S. J., Wise, M. P., Frost, P., Wilson, M. J., Lewis, M. A. O., & Williams, D. W. (2011) · PLoS ONE · doi:10.1371/journal.pone.0014759 · Cited by 83 · see citing works
Möller, D. R., Koth, L. L., Maier, L. A., Morris, A., Drake, W. P., Rossman, M. D., Leader, J. K., Collman, R. G., Hamzeh, N. Y., Sweiss, N., et al. (2015) · Annals of the American Thoracic Society · doi:10.1513/annalsats.201503-172ot · Cited by 81 · see citing works
Vandecandelaere, I., Matthijs, N., Nieuwerburgh, F. V., Deforce, D. L. D., Vosters, P., Bus, L. D., Nelis, H. J. C. F., Depuydt, P. O., & Coenye, T. (2012) · PLoS ONE · doi:10.1371/journal.pone.0038401 · Cited by 82 · see citing works
Preventing Ventilator-Associated Pneumonia
O’Grady, N. P., Murray, P. R., & Ames, N. J. (2012) · JAMA · doi:10.1001/jama.2012.6445 · Cited by 79 · see citing works
Bacterial infections of the oral mucosa
Dahlén, G. (2008) · Periodontology 2000 · doi:10.1111/j.1600-0757.2008.00295.x · Cited by 81 · see citing works
Perkins, S. D., Woeltje, K. F., & Angenent, L. T. (2010) · International Journal of Medical Microbiology · doi:10.1016/j.ijmm.2010.02.005 · Cited by 81 · see citing works
Association Between Daily Toothbrushing and Hospital-Acquired Pneumonia
Ehrenzeller, S., & Klompas, M. (2023) · JAMA Internal Medicine · doi:10.1001/jamainternmed.2023.6638 · Cited by 80 · see citing works
Filho, W. L. S. E. S., Casarin, R. C. V., Nicolela, E., Passos, H. M., Sallum, A. W., & Gonçalves, R. B. (2014) · PLoS ONE · doi:10.1371/journal.pone.0109761 · Cited by 80 · see citing works
Keyt, H., Faverio, P., & Restrepo, M. I. (2020) · Indian Journal of Forensic Medicine & Toxicology · doi:10.37506/ijfmt.v14i4.12331 · Cited by 78 · see citing works
Potential implications of SARS-CoV-2 oral infection in the host microbiota
Xiang, Z., Koo, H., Chen, Q., Zhou, X., Liu, Y., & Simón‐Soro, Á. (2020) · Journal of Oral Microbiology · doi:10.1080/20002297.2020.1853451 · Cited by 77 · see citing works
Severe COVID-19 Lung Infection in Older People and Periodontitis
Aquino-Martínez, R., & Vigueras, S. H. (2021) · Journal of Clinical Medicine · doi:10.3390/jcm10020279 · Cited by 76 · see citing works
Pneumonia nosocomial: importância do microambiente oral
Amaral, S. M., Côrtes, A. D. Q., & Pires, F. R. (2009) · Jornal Brasileiro de Pneumologia · doi:10.1590/s1806-37132009001100010 · Cited by 76 · see citing works
Microbial composition of atherosclerotic plaques
Calandrini, C. A. D. S., Ribeiro, A., Gonnelli, A., Ota‐Tsuzuki, C., Rangel, L., Saba‐Chujfi, E., & Mayer, M. (2013) · Oral Diseases · doi:10.1111/odi.12205 · Cited by 76 · see citing works
As-yet-uncultivated oral bacteria: breadth and association with oral and extra-oral diseases
Siqueira, J. F., Jr., & Rôças, I. N. (2013) · Journal of Oral Microbiology · doi:10.3402/jom.v5i0.21077 · Cited by 72 · see citing works
The Human Microbiome and Understanding the 16S rRNA Gene in Translational Nursing Science
Ames, N. J., Ranucci, A., Moriyama, B., & Wallen, G. R. (2017) · Nursing Research · doi:10.1097/nnr.0000000000000212 · Cited by 74 · see citing works
Zuanazzi, D., do Souto, R. M., Mattos, M., Zuanazzi, M. R., Tura, B. R., Sansone, C., & Colombo, A. P. V. (2009) · Archives of Oral Biology · doi:10.1016/j.archoralbio.2009.10.005 · Cited by 71 · see citing works
Gaeta, N. C., Lima, S. F., Teixeira, A. G. V., Ganda, E., Oikonomou, G., Gregory, L., & Bicalho, R. C. (2016) · Journal of Dairy Science · doi:10.3168/jds.2016-11522 · Cited by 71 · see citing works
Tan, L., Wang, H., Li, C., & Pan, Y. (2014) · Journal of Periodontal Research · doi:10.1111/jre.12159 · Cited by 69 · see citing works
Modulation of potential respiratory pathogens by pH1N1 viral infection.
Leung, R. K.-K., Zhou, J.-W., Guan, W., Li, S.-K., Yang, Z.-F., & Tsui, S. K.-W. (2013) · Clinical Microbiology and Infection · doi:10.1111/1469-0691.12054 · Cited by 66 · see citing works
Bacterial Invasion of Vascular Cell Types: Vascular Infectology and Atherogenesis
Kozarov, E. V. (2011) · Future Cardiology · doi:10.2217/fca.11.75 · Cited by 64 · see citing works
Krause, R., Halwachs, B., Thallinger, G., Klymiuk, I., Gorkiewicz, G., Hoenigl, M., Prattes, J., Valentin, T., Heidrich, K., Buzina, W., et al. (2016) · PLoS ONE · doi:10.1371/journal.pone.0155033 · Cited by 62 · see citing works
Vandecandelaere, I., & Coenye, T. (2014) · Advances in experimental medicine and biology · doi:10.1007/978-3-319-11038-7_9 · Cited by 59 · see citing works
de Carvalho Baptista, I. M., Martinho, F. C., Nascimento, G. G., da Rocha Santos, C. E., Prado, R. F. D., & Valera, M. C. (2018) · Archives of Oral Biology · doi:10.1016/j.archoralbio.2017.09.029 · Cited by 58 · see citing works
Use of rapid diagnostic techniques in ICU patients with infections
Burillo, A., & Bouza, E. (2014) · BMC Infectious Diseases · doi:10.1186/s12879-014-0593-1 · Cited by 58 · see citing works
Nagata, E., de Toledo, A., & Oho, T. (2010) · Molecular Oral Microbiology · doi:10.1111/j.2041-1014.2010.00597.x · Cited by 57 · see citing works
Marchandin, H., & Jumas‐Bilak, E. (2014) · Springer eBooks · doi:10.1007/978-3-642-30120-9_361 · Cited by 52 · see citing works
Caries-associated oral microbiome in head and neck cancer radiation patients: a longitudinal study
Mougeot, J.-L., Stevens, C. B., Almon, K. G., Paster, B. J., Lalla, R. V., Brennan, M. T., & Mougeot, F. B. (2019) · Journal of Oral Microbiology · doi:10.1080/20002297.2019.1586421 · Cited by 50 · see citing works
Self-citationAssociation of sputum microbiota profiles with severity of community-acquired pneumonia in children
Pettigrew, M. M., Gent, J. F., Kong, Y., Wade, M., Gansebom, S., Bramley, A. M., Jain, S., Arnold, S. L. R., & McCullers, J. A. (2016) · BMC Infectious Diseases · doi:10.1186/s12879-016-1670-4 · Cited by 48 · see citing works
Bacteriological Assessment of Healthcare-Associated Pneumonia Using a Clone Library Analysis
Noguchi, S., Mukae, H., Kawanami, T., Yamasaki, K., Fukuda, K., Akata, K., Ishimoto, H., Taniguchi, H., & Yatera, K. (2015) · PLoS ONE · doi:10.1371/journal.pone.0124697 · Cited by 47 · see citing works
Cieplik, F., Wiedenhofer, A. M., Pietsch, V., Hiller, K., Hiergeist, A., Wagner, A., Baldaranov, D., Linker, R. A., Jantsch, J., Buchalla, W., et al. (2020) · Frontiers in Neurology · doi:10.3389/fneur.2020.528056 · Cited by 47 · see citing works
Chen, M., Chang, C., Chiang-Ni, C., Hsieh, P., Shih, H., Ueng, S. W., & Chang, Y. (2019) · Bone and Joint Research · doi:10.1302/2046-3758.88.bjr-2019-0003.r2 · Cited by 46 · see citing works
Oral care for intubated patients: a survey of intensive care unit nurses
Saddki, N., Sani, F. E. M., & Tin‐Oo, M. M. (2014) · Nursing in Critical Care · doi:10.1111/nicc.12119 · Cited by 45 · see citing works
Nanotechnology: Pediatric Applications
Machado, M. C., Cheng, D., Tarquinio, K. M., & Webster, T. J. (2010) · Pediatric Research · doi:10.1203/pdr.0b013e3181d68e78 · Cited by 45 · see citing works
Marinò, P., Hannigan, A., Haywood, S., Cole, J. M., Palmer, N., Emanuel, C., Kinsella, T., Lewis, M. A. O., Wise, M. P., & Williams, D. W. (2016) · BMJ Open Respiratory Research · doi:10.1136/bmjresp-2016-000150 · Cited by 46 · see citing works
Analysis of oral risk factors for ventilator-associated pneumonia in critically ill patients
Takahama, A., de Sousa, V. I., Tanaka, E. E., Ono, E., Ito, F. A. N., Costa, P. P., Pedriali, M. B. B. P., de Lima, H. G., Fornazieri, M. A., Correia, L. S., et al. (2020) · Clinical Oral Investigations · doi:10.1007/s00784-020-03426-x · Cited by 44 · see citing works
May, A. K., Brady, J. S., Romano-Keeler, J., Drake, W. P., Norris, P. R., Jenkins, J. M., Isaacs, R. J., & Boczko, E. M. (2015) · Chest · doi:10.1378/chest.14-1687 · Cited by 40 · see citing works
Mukae, H., Noguchi, S., Naito, K., Kawanami, T., Yamasaki, K., Fukuda, K., Akata, K., Fukuda, Y., Kido, T., Ishimoto, H., et al. (2016) · Respiration · doi:10.1159/000447976 · Cited by 40 · see citing works
Cultivation of Enterobacter Hormaechei from Human Atherosclerotic Tissue
Rafferty, B., Dolgilevich, S. M., Kalachikov, S. M., Morozova, I., Ju, J., Whittier, S., Nowygrod, R., & Kozarov, E. V. (2011) · Journal of Atherosclerosis and Thrombosis · doi:10.5551/jat.5207 · Cited by 39 · see citing works
Lu, W., Yu, J., Ai, Q., Liu, D., Song, C., & Li, L. (2014) · PLoS ONE · doi:10.1371/journal.pone.0087504 · Cited by 36 · see citing works
Binkley, C. J., Haugh, G. S., Kitchens, D. H., Wallace, D. L., & Sessler, D. I. (2009) · Oral Surgery Oral Medicine Oral Pathology Oral Radiology and Endodontology · doi:10.1016/j.tripleo.2009.06.027 · Cited by 36 · see citing works
Perry, S. E., Huckabee, M., Tompkins, G. R., & Milne, T. J. (2019) · Journal of Oral Rehabilitation · doi:10.1111/joor.12903 · Cited by 36 · see citing works
Baselski, V. S., & Klutts, J. S. (2013) · Journal of Clinical Microbiology · doi:10.1128/jcm.03383-12 · Cited by 34 · see citing works
de Castilhos, J., Zamir, E., Hippchen, T., Rohrbach, R., Schmidt, S., Hengler, S., Schumacher, H., Neubauer, M., Kunz, S., Müller-Esch, T., et al. (2021) · Clinical Infectious Diseases · doi:10.1093/cid/ciab902 · Cited by 39 · see citing works
Can metagenomics unravel the impact of oral bacteriome in human diseases?
Chattopadhyay, I., Lu, W., Manikam, R., Malarvili, M. B., Ambati, R. R., & Gundamaraju, R. (2022) · Biotechnology and Genetic Engineering Reviews · doi:10.1080/02648725.2022.2102877 · Cited by 35 · see citing works
Detection of Dialister pneumosintes in the subgingival biofilm of subjects with periodontal disease
Ferraro, C. T. L., Gornic, C., Barbosa, A. S., Peixoto, R. J. M., & Colombo, A. P. V. (2007) · Anaerobe · doi:10.1016/j.anaerobe.2007.09.002 · Cited by 33 · see citing works
Sherrard, L. J., Schaible, B., Graham, K., McGrath, S., McIlreavey, L., Hatch, J., Wolfgang, M. C., Muhlebach, M. S., Gilpin, D. F., Schneiders, T., et al. (2014) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dku192 · Cited by 33 · see citing works
Oral health and ventilator‐associated pneumonia among critically ill patients: a prospective study
Saensom, D., Merchant, A., Wara-aswapati, N., Ruaisungnoen, W., & Pitiphat, W. (2016) · Oral Diseases · doi:10.1111/odi.12535 · Cited by 35 · see citing works
Andremont, O., Armand-Lefèvre, L., Dupuis, C., de Montmollin, É., Ruckly, S., Lucet, J., Smonig, R., Magalhaes, É., Ruppé, É., Mourvillier, B., et al. (2020) · Intensive Care Medicine · doi:10.1007/s00134-020-06029-y · Cited by 31 · see citing works
Bacteroides,Porphyromonas,Prevotella,Fusobacterium, and Other Anaerobic Gram-Negative Rods
Könönen, E., Conrads, G., & Nagy, E. (2015) · ASM Press eBooks · doi:10.1128/9781555817381.ch54 · Cited by 31 · see citing works
Applying Adult Ventilator-associated Pneumonia Bundle Evidence to the Ventilated Neonate
Weber, C. D. (2016) · Advances in Neonatal Care · doi:10.1097/anc.0000000000000276 · Cited by 29 · see citing works
The Oral Microbiome and Lung Diseases
Pu, C. Y., Seshadri, M., Manuballa, S., & Yendamuri, S. (2020) · Current Oral Health Reports · doi:10.1007/s40496-020-00259-1 · Cited by 30 · see citing works
Prevention of Nosocomial Pneumonia in the Intensive Care Unit: Beyond the Use of Bundles
Kollef, M. H. (2010) · Surgical Infections · doi:10.1089/sur.2010.060 · Cited by 28 · see citing works
Diagnosis of ventilator-associated pneumonia: is there a gold standard and a simple approach?
Lisboa, T. C., & Rello, J. (2008) · Current Opinion in Infectious Diseases · doi:10.1097/qco.0b013e3282f55dd1 · Cited by 28 · see citing works
Lee, M. Y., Kim, Y. J., Gu, H. J., & Lee, H. J. (2015) · Anaerobe · doi:10.1016/j.anaerobe.2015.11.006 · Cited by 27 · see citing works
A Characterization of the Oral Microbiome in Allogeneic Stem Cell Transplant Patients
Ames, N. J., Sulima, P., Ngo, T. D., Barb, J. J., Munson, P. J., Paster, B. J., & Hart, T. C. (2012) · PLoS ONE · doi:10.1371/journal.pone.0047628 · Cited by 26 · see citing works
Self-citationAdvances in the relationship between periodontopathogens and respiratory diseases (Review)
Zhang, Z., Wen, S., Liu, J., Ouyang, Y., Su, Z., Chen, D., Liang, Z., Wang, Y., Luo, T., Jiang, Q., et al. (2024) · Molecular Medicine Reports · doi:10.3892/mmr.2024.13166 · Cited by 26 · see citing works
Respiratory therapy device modifications to prevent ventilator-associated pneumonia
Pinciroli, R., Mietto, C., & Berra, L. M. (2013) · Current Opinion in Infectious Diseases · doi:10.1097/qco.0b013e32835d3349 · Cited by 25 · see citing works
Kabak, E., Hudcova, J., Magyarics, Z., Stulik, L., Goggin, M., Szijártó, V., Nagy, E., & Stevens, C. (2019) · BMC Infectious Diseases · doi:10.1186/s12879-019-4367-7 · Cited by 24 · see citing works
Carvajal, C., Pobo, Á., Dı́az, E., Lisboa, T. C., Llauradó‐Serra, M., & Rello, J. (2010) · Medicina Clínica · doi:10.1016/j.medcli.2010.02.039 · Cited by 25 · see citing works
Anticariogenic potentials of clove, tobacco and bitter kola
Dibua, E. U., & Nnamani, P. O. (2011) · Asian Pacific Journal of Tropical Medicine · doi:10.1016/s1995-7645(11)60200-9 · Cited by 24 · see citing works
Anaerobes in Biofilm-Based Healthcare-Associated Infections
Vuotto, C., & Donelli, G. (2014) · Advances in experimental medicine and biology · doi:10.1007/978-3-319-11038-7_6 · Cited by 24 · see citing works
Bousbia, S., Papazian, L., Scola, B. L., & Raoult, D. (2010) · PLoS ONE · doi:10.1371/journal.pone.0011298 · Cited by 23 · see citing works
Pneumonia caused by Pseudomonas fluorescens: a case report
Liu, X., Xiang, L., Yin, Y., Li, H., Ma, D., & Qu, Y.-Q. (2021) · BMC Pulmonary Medicine · doi:10.1186/s12890-021-01573-9 · Cited by 23 · see citing works
Geerds, M. A. J., Folbert, E. C., Visschedijk, S. F. M., Klunder, M. B., Vollenbroek-Hutten, M. M. R., & Hegeman, J. H. (2022) · Injury · doi:10.1016/j.injury.2022.06.017 · Cited by 24 · see citing works
Low Efficacy of Antibiotics Against Staphylococcus aureus Airway Colonization in Ventilated Patients
Stulik, L., Hudcova, J., Craven, D. E., Nagy, G., & Nagy, E. (2017) · Clinical Infectious Diseases · doi:10.1093/cid/cix055 · Cited by 23 · see citing works
Endotracheal tube microbiome in hospitalized patients defined largely by hospital environment
Cifuentes, E. A., Sierra, M. A., Yepes, A., Baldión, A. M., Rojas, J. A., Álvarez, C., Anzola, J. M., Zambrano, M. M., & Huertas, M. G. (2022) · Respiratory Research · doi:10.1186/s12931-022-02086-7 · Cited by 21 · see citing works
Pneumonia Pathogen Detection and Microbial Interactions in Polymicrobial Episodes
Bousbia, S., Raoult, D., & Scola, B. L. (2013) · Future Microbiology · doi:10.2217/fmb.13.26 · Cited by 21 · see citing works
Prevention of ventilator-associated pneumonia
Hong Kong East Cluster Task Force on Prevention of Ventilator-associated Pneumonia in Critical Care Areas, Lau, A. C., So, H., Tang, S., Yeung, A. W., Lam, S., & Yan, W. (2015) · Hong Kong Medical Journal · doi:10.12809/hkmj144367 · Cited by 22 · see citing works
Ventilator-associated pneumonia: Problems with diagnosis and therapy
Wiener-Kronish, J. P., & Dorr, H. I. (2008) · Best practice & research. Clinical anaesthesiology · doi:10.1016/j.bpa.2008.05.002 · Cited by 22 · see citing works
Microbiome: what intensivists should know
Nakov, R., Segal, J. P., Settanni, C. R., Bibbò, S., Gasbarrini, A., Cammarota, G., & Ianiro, G. (2020) · Minerva Anestesiologica · doi:10.23736/s0375-9393.20.14278-0 · Cited by 21 · see citing works
Pseudomonas fluorescens pneumonia
Ishii, H., Kushima, H., Koide, Y., & Kinoshita, Y. (2024) · International Journal of Infectious Diseases · doi:10.1016/j.ijid.2024.01.007 · Cited by 21 · see citing works
Bacteroides, Porphyromonas, Prevotella, Fusobacterium, and Other Anaerobic Gram-Negative Rods
K�n�nen, E., Wade, W. G., & Citron, D. M. (2011) · Wiley eBooks · doi:10.1128/9781555816728.ch51 · Cited by 21 · see citing works
Yatera, K., Noguchi, S., Yamasaki, K., Kawanami, T., Fukuda, K., Naito, K., Akata, K., Kido, T., Ishimoto, H., Sakamoto, N., et al. (2017) · The Tohoku Journal of Experimental Medicine · doi:10.1620/tjem.242.9 · Cited by 19 · see citing works
Parfenov, A., Petrova, M. V., Пичугина, И. М., & Luginina, E. V. (2020) · General Reanimatology · doi:10.15360/1813-9779-2020-4-72-89 · Cited by 19 · see citing works
Chappell, K. J. (2013) · Journal of Medical Microbiology & Diagnosis · doi:10.4172/2161-0703.s1-005 · Cited by 18 · see citing works
- Authors
- Bahrani-Mougeot, F. K., Paster, B. J., Coleman, S., Barbuto, S., Brennan, M. T., Noll, J., Kennedy, T., Fox, P. C., & Lockhart, P. B.
- Affiliations
- Department of Oral Medicine, Carolinas Medical Center, Charlotte, North Carolina
- The Forsyth Institute (US)
- Carolinas Medical Center (US)
- University of Utah (US)
- Venue
- Journal of Clinical Microbiology
- Publisher
- American Society for Microbiology
- Published
- 2007-05
- Volume
- 45
- Issue
- 5
- Pages
- 1588-1593
- ISSN
- 0095-1137 (ISSN-L)
- 1098-660X
- PMC
- PMC1865865
- OpenAlex
- W2069340069
- Cited by
- 176
- References
- 25
- Citations by year
- 2026: 4 · 2025: 4 · 2024: 4 · 2023: 9 · 2022: 10 · 2021: 7 · 2020: 13 · 2019: 8 · 2018: 2 · 2017: 10 · 2016: 10 · 2015: 12 · 2014: 19 · 2013: 13 · 2012: 8
- FWCI
- 9.67
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Clinical Microbiology (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Health Sciences › Medicine › Critical Care and Intensive Care Medicine › Nosocomial Infections in ICU
- Health Sciences › Dentistry › Periodontics › Oral microbiology and periodontitis research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Clinical Biochemistry › Bacterial Identification and Susceptibility Testing
- Keywords
- ventilator-associated pneumonia, oral bacteria, oropharyngeal colonization, tongue dorsum, bronchoalveolar lavage, 16S rRNA gene sequencing, bacterial diversity, uncultured bacteria, novel bacterial species, mechanical ventilation, trauma intensive care, bacterial reservoir, Dialister pneumosintes, Gemella morbillorum, Pseudomonas fluorescens
- MeSH terms
- Adult, Bacteria, Female, Humans, Male, Middle Aged, Mouth, Phylogeny, Respiratory System, Species Specificity, Wounds and Injuries, Pneumonia, Bacterial, Pneumonia, Ventilator-Associated
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