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Receptor Recognition by the Novel Coronavirus from Wuhan: an Analysis Based on Decade-Long Structural Studies of SARS Coronavirus
Open accessAbstract
The recent emergence of Wuhan coronavirus (2019-nCoV) puts the world on alert. 2019-nCoV is reminiscent of the SARS-CoV outbreak in 2002 to 2003. Our decade-long structural studies on the receptor recognition by SARS-CoV have identified key interactions between SARS-CoV spike protein and its host receptor angiotensin-converting enzyme 2 (ACE2), which regulate both the cross-species and human-to-human transmissions of SARS-CoV. One of the goals of SARS-CoV research was to build an atomic-level iterative framework of virus-receptor interactions to facilitate epidemic surveillance, predict species-specific receptor usage, and identify potential animal hosts and animal models of viruses. Based on the sequence of 2019-nCoV spike protein, we apply this predictive framework to provide novel insights into the receptor usage and likely host range of 2019-nCoV. This study provides a robust test of this reiterative framework, providing the basic, translational, and public health research communities with predictive insights that may help study and battle this novel 2019-nCoV.
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“RBD contains a core structure and a variable receptor-binding motif (RBM; 437–508 a.a.) which interacts and attaches with the host cell ACE-2 receptor (Fig. 2) [7].”
From Waves and variants of SARS-CoV-2: understanding the causes and effect of the COVID-19 catastrophe (2022) · cites this paper as [7]
Experimental — accuracy not yet measuredThe source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
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“RBD contains a core structure and a variable receptor-binding motif (RBM; 437–508 a.a.) which interacts and attaches with the host cell ACE-2 receptor (Fig. 2) [7].”
From Waves and variants of SARS-CoV-2: understanding the causes and effect of the COVID-19 catastrophe (2022) · cites this paper as [7]
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Herbal immune-boosters: Substantial warriors of pandemic Covid-19 battle
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Master Regulator Analysis of the SARS-CoV-2/Human Interactome
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One year update on the COVID-19 pandemic: Where are we now?
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“in various CoVs, and natural selection has promoted optimal binding affinity during the course of host shifting (Wan et al., 2020; Wrapp et al., 2020; Zhou et al., 2020).”
Peripheral Nervous System Manifestations Associated with COVID-19
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COVID-19—Zoonosis or Emerging Infectious Disease?
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“Zoo animals including a tiger and a lion were reported to have been infected by their zoo career (8, 33, 34).”
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“Therefore, RBD is the critical determinant of virus receptor interaction and reflects host selectivity, virus tropism, and infectivity [88,89].”
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Lazarević, I., Pravica, V., Miljanovic, D., & Cupic, M. D. (2021) · Viruses · doi:10.3390/v13071192 · Cited by 193
SARS-CoV-2: The viral shedding vs infectivity dilemma
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Molecular Mechanism of Evolution and Human Infection with SARS-CoV-2
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Two important controversial risk factors in SARS-CoV-2 infection: Obesity and smoking
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Psycho-Neuroendocrine-Immune Interactions in COVID-19: Potential Impacts on Mental Health
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“Although the existence of more than one receptor for this virus cannot be excluded by now, evidence so far reveals that SARS-CoV-2 enters human host cells using the same receptor of SARS-CoV, the human angiotensin-converting enzyme 2 (hACE2) (14).”
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“Similarly, ACE2 is highly expressed on podocytes and tubule epithelial cells of the kidney, whereas a recent study has suggested viral tropism for the kidney.(8) Furthermore, studies of previous coronaviruses have shown that blocking C3 activation significantly attenuates the lungdirected proinflammatory sequelae of i…”
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“SARS-CoV-2 is strongly suspected to use ACE2 as its receptor, and ACE2 binding affinity has been shown to be one of the most important determinants of SARS-CoV infectivity [28].”
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“Mouse adaptation of SARS-CoV-2 would be useful for the acceleration of mouse testing but may prove difficult as SARS-CoV-2 Spike appears to have evolved high affinity for human ACE2 at the expense of lower affinity for ACE2 in other organisms (Wan et al., 2020).”
BackgroundPulmonary and Extra-Pulmonary Clinical Manifestations of COVID-19
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“Additionally, studies have found overexpression of ACE-2 in the epithelial cells of the GI tract, suggesting SARS-CoV-2 replication in the GI tract (42).”
BackgroundAnimal and translational models of SARS-CoV-2 infection and COVID-19
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“115 117 Recently, ferret ACE2 was shown to contain the critical residues required for binding by SARS-CoV-2 RBD. 118 The animals were susceptible to SARS-CoV-2 infection with viral replication in the URT, however, only low levels of virus were detected in lungs.”
Background
Metadata
- Authors
- Wan, Y., Shang, J., Graham, R., Baric, R. S., & Li, F.
- Affiliations
- University of Minnesota (US)
- University of North Carolina at Chapel Hill (US)
- Corresponding author
- Li, Fang
- Venue
- Journal of Virology
- Publisher
- American Society for Microbiology
- Published
- 2020-03-17
- Volume
- 94
- Issue
- 7
- ISSN
- 0022-538X (ISSN-L)
- 1098-5514
- PMC
- PMC7081895
- OpenAlex
- W3004348779
- Cited by
- 4,341
- References
- 38
- Citations by year
- 2026: 27 · 2025: 75 · 2024: 170 · 2023: 299 · 2022: 619 · 2021: 1273 · 2020: 1865
- FWCI
- 133.25
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Virology (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- HHS | NIH | National Institute of Allergy and Infectious Diseases (R01AI089728, R01AI110700)
- Topics
- Health Sciences › Medicine › Infectious Diseases › SARS-CoV-2 and COVID-19 Research
- Life Sciences › Agricultural and Biological Sciences › Animal Science and Zoology › Animal Virus Infections Studies
- Health Sciences › Medicine › Infectious Diseases › Viral Infections and Outbreaks Research
- Keywords
- SARS-CoV-2, SARS-CoV, spike protein, angiotensin-converting enzyme 2, receptor recognition, host range prediction, interspecies transmission, human-to-human transmission, animal models, disease surveillance
- MeSH terms
- Protein Domains, Betacoronavirus, Angiotensin-Converting Enzyme 2, COVID-19, SARS-CoV-2, Amino Acid Sequence, Animals, China, Chiroptera, Humans, Peptidyl-Dipeptidase A, Models, Molecular, Phylogeny, Pneumonia, Viral, Receptors, Virus, Sequence Alignment, Coronavirus Infections, Severe acute respiratory syndrome-related coronavirus, Host Specificity, Spike Glycoprotein, Coronavirus
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