The epigenetic pathways to ribosomal DNA silencing
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SUMMARY: Heterochromatin is the transcriptionally repressed portion of eukaryotic chromatin that maintains a condensed appearance throughout the cell cycle. At sites of ribosomal DNA (rDNA) heterochromatin, epigenetic states contribute to gene silencing and genome stability, which are required for proper chromosome segregation and a normal life span. Here, we focus on recent advances in the epigenetic regulation of rDNA silencing in Saccharomyces cerevisiae and in mammals, including regulation by several histone modifications and several protein components associated with the inner nuclear membrane within the nucleolus. Finally, we discuss the perturbations of rDNA epigenetic pathways in regulating cellular aging and in causing various types of diseases.
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Repressive histone modifications, DNA methylation and nucleosome remodeling are mechanisms responsible for rDNA silencing in yeast and mammalian cells.
“Repressive histone modifications, DNA methylation and nucleosome remodeling have been identified as the mechanisms responsible for rDNA silencing in studies performed mainly in yeast and mammalian cells (see (26–29) for reviews).”
From Impaired function of rDNA transcription initiation machinery leads to derepression of ribosomal genes with insertions of R2 retrotransposon (2022) · cites this paper as [28]
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- Authors
- Srivastava, R., Srivastava, R., & Ahn, S. H.
- Affiliations
- Hanyang University (KR)
- Venue
- Microbiology and Molecular Biology Reviews
- Publisher
- American Society for Microbiology
- Published
- 2016-09
- Volume
- 80
- Issue
- 3
- Pages
- 545-563
- ISSN
- 1092-2172 (ISSN-L)
- 1098-5557
- PMC
- PMC4981667
- OpenAlex
- W2416688624
- Cited by
- 90
- References
- 13
- Citations by year
- 2026: 6 · 2025: 10 · 2024: 9 · 2023: 9 · 2022: 11 · 2021: 16 · 2020: 2 · 2019: 17 · 2018: 6 · 2017: 1 · 2016: 2
- FWCI
- 0.78
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Microbiology and Molecular Biology Reviews (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Nuclear Structure and Function
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Epigenetics and DNA Methylation
- Keywords
- heterochromatin, epigenetic regulation, histone modifications, nucleolus, inner nuclear membrane, genome stability, cellular aging, Saccharomyces cerevisiae, chromosome segregation
- MeSH terms
- Acetylation, DNA, Ribosomal, Heterochromatin, Histones, Poly(ADP-ribose) Polymerases, Cellular Senescence, DNA Methylation, Gene Silencing, Ubiquitination
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