Genetic mechanisms underlying feed utilization and implementation of genomic selection for improved feed efficiency in dairy cattle
Open accessAbstract
The economic importance of genetically improving feed efficiency has been recognized by cattle producers worldwide. It has the potential to considerably reduce costs, minimize environmental impact, optimize land and resource use efficiency, and improve the overall cattle industry’s profitability. Feed efficiency is a genetically complex trait that can be described as units of product output (e.g., milk yield) per unit of feed input. The main objective of this review paper is to present an overview of the main genetic and physiological mechanisms underlying feed utilization in ruminants and the process towards implementation of genomic selection for feed efficiency in dairy cattle. In summary, feed efficiency can be improved via numerous metabolic pathways and biological mechanisms through genetic selection. Various studies have indicated that feed efficiency is heritable, and genomic selection can be successfully implemented in dairy cattle with a large enough training population. In this context, some organizations have worked collaboratively to do research and develop training populations for successful implementation of joint international genomic evaluations. The integration of “-omics” technologies, further investments in high-throughput phenotyping, and identification of novel indicator traits will also be paramount in maximizing the rates of genetic progress for feed efficiency in dairy cattle worldwide.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Genetic manipulation of rumen microbiota is possible through different techniques as host genetics influences some heritable microbial traits.
“However, genetic manipulation of rumen microbiota is also possible through different techniques as host genetics influences some heritable microbial traits (81–83).”
From Phytogenic Additives Can Modulate Rumen Microbiome to Mediate Fermentation Kinetics and Methanogenesis Through Exploiting Diet–Microbe Interaction (2020) · cites this paper as [82]
The sections on heritability estimates and host–microbiome interactions report heritable microbial features and links to host genetics. The role-of-rumen-microbiome section describes genetic selection for a desirable profile as a potential, not an established means of manipulating rumen microbiota through different techniques. Page numbers are not available in the supplied passages. (LLM, conf=0.85)
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
WGCNA: an R package for weighted correlation network analysis
Langfelder, P., & Horvath, S. (2008) · BMC Bioinformatics · doi:10.1186/1471-2105-9-559 · Cited by 27,252 · see citing works
Prediction of Total Genetic Value Using Genome-Wide Dense Marker Maps
Meuwissen, T. H. E., Hayes, B. J., & Goddard, M. E. (2001) · Genetics · doi:10.1093/genetics/157.4.1819 · Cited by 7,917 · see citing works
Effects of Diet on Short-Term Regulation of Feed Intake by Lactating Dairy Cattle
Allen, M. S. (2000) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(00)75030-2 · Cited by 1,550 · see citing works
Invited Review: Reliability of genomic predictions for North American Holstein bulls
VanRaden, P. M., Tassell, C. P. V., Wiggans, G. R., Sonstegard, T. S., Schnabel, R. D., Taylor, J. F., & Schenkel, F. S. (2008) · Journal of Dairy Science · doi:10.3168/jds.2008-1514 · Cited by 1,336 · see citing works
Self-citationBenson, A. K., Kelly, S. A., Legge, R., Ma, F., Low, S. J., Kim, J., Zhang, M., Oh, P. L., Nehrenberg, D., Hua, K., et al. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1007028107 · Cited by 1,314 · see citing works
Efficiency of Feed Use in Beef Cattle
Koch, R. M., Swiger, L. A., Chambers, D., & GREGORY, K. E. (1963) · Journal of Animal Science · doi:10.2527/jas1963.222486x · Cited by 1,304 · see citing works
A whole-genome assembly of the domestic cow, Bos taurus
Zimin, A. V., Delcher, A. L., Florea, L., Kelley, D. R., Schatz, M. C., Puiu, D., Hanrahan, F., Pertea, G. M., Tassell, C. P. V., Sonstegard, T. S., et al. (2009) · Genome biology · doi:10.1186/gb-2009-10-4-r42 · Cited by 1,143 · see citing works
Genomic selection: prediction of accuracy and maximisation of long term response
Goddard, M. E. (2008) · Genetica · doi:10.1007/s10709-008-9308-0 · Cited by 1,094 · see citing works
Specific microbiome-dependent mechanisms underlie the energy harvest efficiency of ruminants.
Shabat, S. K. B., Sasson, G., Doron-Faigenboim, A., Durman, T., Yaacoby, S., Berg Miller, M. E., White, B. A., Shterzer, N., & Mizrahi, I. (2016) · The ISME Journal · doi:10.1038/ismej.2016.62 · Cited by 823 · see citing works
Accuracy of Predicting the Genetic Risk of Disease Using a Genome-Wide Approach
Daetwyler, H. D., Villanueva, B., & Woolliams, J. A. (2008) · PLoS ONE · doi:10.1371/journal.pone.0003395 · Cited by 721 · see citing works
Williams, A. G., & Coleman, G. S. (1991) · Cited by 675 · see citing works
Allen, M. S., Bradford, B. J., & Oba, M. (2009) · Journal of Animal Science · doi:10.2527/jas.2009-1779 · Cited by 633 · see citing works
Physiological basis for residual feed intake.
Herd, R., & Arthur, P. (2009) · Journal of Animal Science · doi:10.2527/jas.2008-1345 · Cited by 539 · see citing works
Li, F., Li, C., Chen, Y., Liu, J., Zhang, C., Irving, B., Fitzsimmons, C., Plastow, G., & Guan, L. L. (2019) · Microbiome · doi:10.1186/s40168-019-0699-1 · Cited by 530 · see citing works
Accuracy of genomic breeding values in multi-breed dairy cattle populations
Hayes, B. J., Bowman, P. J., Chamberlain, A. C., VERBYLA, K. L., & Goddard, M. E. (2009) · Genetics Selection Evolution · doi:10.1186/1297-9686-41-51 · Cited by 493 · see citing works
Miglior, F., Fleming, A., Malchiodi, F., Brito, L. F., Martin, P. M., & Baes, C. F. (2017) · Journal of Dairy Science · doi:10.3168/jds.2017-12968 · Cited by 472 · see citing works
Self-citationAssociation of host genome with intestinal microbial composition in a large healthy cohort
GEM Project Research Consortium, Turpin, W., Espin-Garcia, O., Xu, W., Silverberg, M. S., Kevans, D., Smith, M. I., Guttman, D. S., Griffiths, A., Panaccione, R., et al. (2016) · Nature Genetics · doi:10.1038/ng.3693 · Cited by 460 · see citing works
The impact of genetic relationship information on genomic breeding values in German Holstein cattle
Habier, D., Tetens, J., Seefried, F. R., Lichtner, P., & Thaller, G. E. (2010) · Genetics Selection Evolution · doi:10.1186/1297-9686-42-5 · Cited by 455 · see citing works
Rumen Microbiome from Steers Differing in Feed Efficiency
Myer, P. R., Smith, T. P. L., Wells, J. E., Kuehn, L. A., & Freetly, H. C. (2015) · PLoS ONE · doi:10.1371/journal.pone.0129174 · Cited by 413 · see citing works
A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions
Wallace, R. J., Sasson, G., Garnsworthy, P. C., Tapio, I., Gregson, E., Bani, P., Huhtanen, P., Bayat, A. R., Strozzi, F., Biscarini, F., et al. (2019) · Science Advances · doi:10.1126/sciadv.aav8391 · Cited by 410 · see citing works
A review of feed efficiency in swine: biology and application
Patience, J. F., Rossoni-Serão, M. C., & Gutierrez, N. A. (2015) · Journal of Animal Science and Biotechnology/Journal of animal science and biotechnology · doi:10.1186/s40104-015-0031-2 · Cited by 396 · see citing works
Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows
Difford, G. F., Plichta, D. R., Løvendahl, P., Lassen, J., Noel, S. J., Højberg, O., Wright, A. G., Zhu, Z., Kristensen, L., Nielsen, H. B., et al. (2018) · PLoS Genetics · doi:10.1371/journal.pgen.1007580 · Cited by 387 · see citing works
Harnessing genomic information for livestock improvement
Georges, M., Charlier, C., & Hayes, B. (2019) · Nature Reviews Genetics · doi:10.1038/s41576-018-0082-2 · Cited by 384 · see citing works
Hayes, B. J., Lewin, H. A., & Goddard, M. E. (2012) · Trends in Genetics · doi:10.1016/j.tig.2012.11.009 · Cited by 383 · see citing works
CELL BIOLOGY SYMPOSIUM: Genetics of feed efficiency in dairy and beef cattle1
Berry, D. P., & Crowley, J. J. (2013) · Journal of Animal Science · doi:10.2527/jas.2012-5862 · Cited by 377 · see citing works
Li, F., & Guan, L. L. (2017) · Applied and Environmental Microbiology · doi:10.1128/aem.00061-17 · Cited by 346 · see citing works
Richardson, E. C., & Herd, R. M. (2004) · Australian Journal of Experimental Agriculture · doi:10.1071/ea02221 · Cited by 312 · see citing works
Weimer, P. J., Stevenson, D. M., Mantovani, H. C., & Man, S. L. C. (2010) · Journal of Dairy Science · doi:10.3168/jds.2010-3500 · Cited by 267 · see citing works
Kelly, A. K., McGee, M., Crews, D. H., Fahey, A. G., Wylie, A. R. G., & Kenny, D. A. (2009) · Journal of Animal Science · doi:10.2527/jas.2009-2196 · Cited by 247 · see citing works
Herd, R. M., Oddy, V. H., & Richardson, E. C. (2004) · Australian Journal of Experimental Agriculture · doi:10.1071/ea02220 · Cited by 243 · see citing works
Herd, R. M., Archer, J. A., & Arthur, P. F. (2003) · Journal of Animal Science · doi:10.2527/2003.8113_suppl_1e9x · Cited by 224 · see citing works
Sasson, G., Kruger Ben-Shabat, S., Seroussi, E., Doron-Faigenboim, A., Shterzer, N., Yaacoby, S., Berg Miller, M. E., White, B. A., Halperin, E., & Mizrahi, I. (2017) · mBio · doi:10.1128/mbio.00703-17 · Cited by 219 · see citing works
Major Advances in Applied Dairy Cattle Nutrition
Eastridge, M. L. (2006) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(06)72199-3 · Cited by 206 · see citing works
Manipulating Metabolic Parameters to Improve Growth Rate and Milk Secretion
Baldwin, R. L., Smith, N. E., Taylor, J., et al. (1980) · Journal of Animal Science · doi:10.2527/jas1981.5161416x · Cited by 202 · see citing works
Basarab, J. A., Beauchemin, K. A., Baron, V. S., Ominski, K., Guan, L., Miller, S. P., & Crowley, J. J. (2013) · animal · doi:10.1017/s1751731113000888 · Cited by 202 · see citing works
Harnessing the genetics of the modern dairy cow to continue improvements in feed efficiency
VandeHaar, M. J., Armentano, L. E., WEIGEL, K. A., Spurlock, D. M., Tempelman, R. J., & Veerkamp, R. F. (2016) · Journal of Dairy Science · doi:10.3168/jds.2015-10352 · Cited by 200 · see citing works
Selecting sequence variants to improve genomic predictions for dairy cattle
VanRaden, P. M., Tooker, M. E., O’Connell, J. R., et al. (2017) · Genetics Selection Evolution · doi:10.1186/s12711-017-0307-4 · Cited by 190 · see citing works
SNP discovery in the bovine milk transcriptome using RNA-Seq technology
Cánovas, Á., Rincón, G., Islas‐Trejo, A., Wickramasinghe, S., & Medrano, J. F. F. (2010) · Mammalian Genome · doi:10.1007/s00335-010-9297-z · Cited by 188 · see citing works
Invited review: Improving feed efficiency in dairy production: challenges and possibilities
Connor, E. E. (2014) · animal · doi:10.1017/s1751731114002997 · Cited by 188 · see citing works
Genetic aspects of feed intake and efficiency in lactating dairy heifers
van Arendonk, J. A. M., Nieuwhof, G. J., Vos, H., et al. (1991) · Livestock Production Science · doi:10.1016/0301-6226(91)90103-w · Cited by 182 · see citing works
Goddard, M. E., Kemper, K. E., MacLeod, I. M., Chamberlain, A. J., & Hayes, B. J. (2016) · Proceedings of the Royal Society B Biological Sciences · doi:10.1098/rspb.2016.0569 · Cited by 179 · see citing works
Bolormaa, S., Pryce, J. E., Kemper, K. E., Savin, K. W., Hayes, B. J., Barendse, W., Zhang, Y., Reich, C. M., Mason, B., Bunch, R. J., et al. (2013) · Journal of Animal Science · doi:10.2527/jas.2012-5827 · Cited by 176 · see citing works
Animal size and efficiency: basic concepts
Dickerson, G. E. (1978) · Animal Science · doi:10.1017/s0003356100036278 · Cited by 168 · see citing works
Pryce, J. E., Arias, J., Bowman, P. J., Davis, S. R., Macdonald, K. A., Waghorn, G. C., Wales, W. J., Williams, Y. J., Spelman, R. J., & Hayes, B. J. (2012) · Journal of Dairy Science · doi:10.3168/jds.2011-4628 · Cited by 156 · see citing works
Montanholi, Y. R., Swanson, K. C., Palme, R., et al. (2009) · animal · doi:10.1017/s1751731109991522 · Cited by 155 · see citing works
Hot topic: Definition and implementation of a breeding value for feed efficiency in dairy cows
Pryce, J. E., González-Recio, Ó., Nieuwhof, G. J., et al. (2015) · Journal of Dairy Science · doi:10.3168/jds.2015-9621 · Cited by 144 · see citing works
Rumen bacterial community structure impacts feed efficiency in beef cattle
Paz, H. A., Hales, K. E., Wells, J. E., Kuehn, L. A., Freetly, H. C., Berry, E. D., Flythe, M. D. D., Spangler, M. L., & Fernando, S. C. (2018) · Journal of Animal Science · doi:10.1093/jas/skx081 · Cited by 140 · see citing works
Genomic selection for feed efficiency in dairy cattle
Pryce, J. E., Wales, W. J., de Haas, Y., Veerkamp, R. F., & Hayes, B. J. (2013) · animal · doi:10.1017/s1751731113001687 · Cited by 139 · see citing works
Tempelman, R. J., Spurlock, D. M., Coffey, M. P., et al. (2015) · Journal of Dairy Science · doi:10.3168/jds.2014.8510 · Cited by 138 · see citing works
Veerkamp, R. F., Simm, G., & Oldham, J. D. (1994) · Livestock Production Science · doi:10.1016/0301-6226(94)90202-x · Cited by 134 · see citing works
Berry, D. P., Coffey, M. P., Pryce, J. E., de Haas, Y., Løvendahl, P., Krattenmacher, N., Crowley, J. J., Wang, Z., Spurlock, D. M., WEIGEL, K. A., et al. (2014) · Journal of Dairy Science · doi:10.3168/jds.2013-7548 · Cited by 131 · see citing works
Technical note: Prediction of breeding values using marker-derived relationship matrices
Hayes, B. J., & Goddard, M. E. (2008) · Journal of Animal Science · doi:10.2527/jas.2007-0733 · Cited by 131 · see citing works
Genetic parameters for energy balance, feed efficiency, and related traits in Holstein cattle
Spurlock, D. M., Dekkers, J. C. M., Fernando, R. L., et al. (2012) · Journal of Dairy Science · doi:10.3168/jds.2012-5407 · Cited by 120 · see citing works
Genome‐wide association analysis for feed efficiency in Angus cattle
Rolf, M. M., Taylor, J. F., Schnabel, R. D., McKay, S., McClure, M. C., Northcutt, S. L., Kerley, M. S., & Weaber, R. L. (2011) · Animal Genetics · doi:10.1111/j.1365-2052.2011.02273.x · Cited by 120 · see citing works
Rumen Function and Development
Baldwin, R. L., & Connor, E. E. (2017) · Veterinary Clinics of North America Food Animal Practice · doi:10.1016/j.cvfa.2017.06.001 · Cited by 119 · see citing works
Williams, A. G., & Coleman, G. S. (1997) · Springer eBooks · doi:10.1007/978-94-009-1453-7_3 · Cited by 117 · see citing works
Olivieri, B. F., Mercadante, M. E. Z., Cyrillo, J. N. D. S. G., Branco, R. H., Bonilha, S. F. M., de Albuquerque, L. G., Silva, R. M. D. O., & Baldi, F. S. (2016) · PLoS ONE · doi:10.1371/journal.pone.0164390 · Cited by 116 · see citing works
McParland, S., Lewis, E., Kennedy, E., Moore, S. G., McCarthy, B., O’Donovan, M., Butler, S. T., Pryce, J. E., & Berry, D. P. (2014) · Journal of Dairy Science · doi:10.3168/jds.2014-8214 · Cited by 115 · see citing works
Variation in residual feed intake in Holstein-Friesian dairy heifers in southern Australia
Williams, Y. J., Pryce, J. E., Grainger, C. I., et al. (2011) · Journal of Dairy Science · doi:10.3168/jds.2010-4015 · Cited by 111 · see citing works
Salleh, M. S. M., Mazzoni, G., Höglund, J., Olijhoek, D., Lund, P., Løvendahl, P., & Kadarmideen, H. N. (2017) · BMC Genomics · doi:10.1186/s12864-017-3622-9 · Cited by 106 · see citing works
Vallimont, J. E., Dechow, C. D., Daubert, J., et al. (2011) · Journal of Dairy Science · doi:10.3168/jds.2010-3888 · Cited by 102 · see citing works
Forbes, J. M. (2007) · Nutrition Research Reviews · doi:10.1017/s0954422407797834 · Cited by 98 · see citing works
MacLeod, I. M., Hayes, B. J., & Goddard, M. E. (2014) · Genetics · doi:10.1534/genetics.114.168344 · Cited by 97 · see citing works
The genetic and biological basis of feed efficiency in mid-lactation Holstein dairy cows
Hardie, L. C., VandeHaar, M. J., Tempelman, R. J., WEIGEL, K. A., Armentano, L. E., Wiggans, G. R., Veerkamp, R. F., de Haas, Y., Coffey, M. P., Connor, E. E., et al. (2017) · Journal of Dairy Science · doi:10.3168/jds.2017-12604 · Cited by 95 · see citing works
Moore, K. L., Johnston, D. J., Graser, H., et al. (2005) · Australian Journal of Agricultural Research · doi:10.1071/ar04248 · Cited by 88 · see citing works
Yao, C., Spurlock, D. M., Armentano, L. E., Page, C. D., VandeHaar, M. J., Bickhart, D. M., & WEIGEL, K. A. (2013) · Journal of Dairy Science · doi:10.3168/jds.2012-6237 · Cited by 86 · see citing works
Review of the feed industry from a historical perspective and implications for its future
Coffey, D., Dawson, K., Ferket, P. R., et al. (2016) · Journal of Applied Animal Nutrition · doi:10.1017/jan.2015.11 · Cited by 86 · see citing works
Coleman, J. M., Berry, D. P., Pierce, K. M., et al. (2010) · Journal of Dairy Science · doi:10.3168/jds.2009-2686 · Cited by 81 · see citing works
Dórea, J. R. R., Rosa, G. J. M., Weld, K. A., et al. (2018) · Journal of Dairy Science · doi:10.3168/jds.2017-13997 · Cited by 81 · see citing works
Vallimont, J. E., Dechow, C. D., Daubert, J., et al. (2010) · Journal of Dairy Science · doi:10.3168/jds.2010-3189 · Cited by 80 · see citing works
de Haas, Y., Calus, M. P. L., Veerkamp, R. F., Wall, E., Coffey, M. P., Daetwyler, H. D., Hayes, B. J., & Pryce, J. E. (2012) · Journal of Dairy Science · doi:10.3168/jds.2011-5280 · Cited by 80 · see citing works
High-density genome-wide association study for residual feed intake in Holstein dairy cattle
Li, B., Fang, L., Null, D. J., Hutchison, J. L., Connor, E. E., VanRaden, P. M., VandeHaar, M. J., Tempelman, R. J., WEIGEL, K. A., & Cole, J. B. (2019) · Journal of Dairy Science · doi:10.3168/jds.2019-16645 · Cited by 80 · see citing works
RNA-Sequencing: A tool to explore new frontiers in animal genetics
Wickramasinghe, S., Cánovas, Á., Rincón, G., & Medrano, J. F. F. (2014) · Livestock Science · doi:10.1016/j.livsci.2014.06.015 · Cited by 79 · see citing works
Hart, E. H., Creevey, C. J., Hitch, T. C. A., & Kingston‐Smith, A. H. (2018) · Scientific Reports · doi:10.1038/s41598-018-28827-7 · Cited by 79 · see citing works
Hou, Y., Bickhart, D. M., Chung, H., et al. (2012) · Functional & Integrative Genomics · doi:10.1007/s10142-012-0295-y · Cited by 74 · see citing works
Shetty, N., Løvendahl, P., Lund, M. S., et al. (2016) · Journal of Dairy Science · doi:10.3168/jds.2016-11609 · Cited by 73 · see citing works
Predicted accuracy of and response to genomic selection for new traits in dairy cattle
Calus, M. P. L., de Haas, Y., Pszczoła, M., & Veerkamp, R. F. (2012) · animal · doi:10.1017/s1751731112001450 · Cited by 69 · see citing works
Single nucleotide polymorphisms for feed efficiency and performance in crossbred beef cattle
Abo-Ismail, M. K., Voort, G. V., Squires, J. J., Swanson, K. C., Mandell, I. B., Liao, X., Stothard, P., Moore, S. S., Plastow, G. S., & Miller, S. P. (2014) · BMC Genetics · doi:10.1186/1471-2156-15-14 · Cited by 68 · see citing works
de Haas, Y., Pryce, J. E., Calus, M. P. L., Wall, E., Berry, D. P., Løvendahl, P., Krattenmacher, N., Miglior, F., WEIGEL, K. A., Spurlock, D. M., et al. (2015) · Journal of Dairy Science · doi:10.3168/jds.2014-9257 · Cited by 66 · see citing works
Self-citationGenetic Evaluations for Mixed-Breed Populations
VanRaden, P. M., Tooker, M. E., Cole, J. B., et al. (2007) · Journal of Dairy Science · doi:10.3168/jds.2006-704 · Cited by 62 · see citing works
Santschi, D. E., Lefebvre, D., Cue, R. I., et al. (2011) · Journal of Dairy Science · doi:10.3168/jds.2010-3594 · Cited by 62 · see citing works
Accuracy of genomic breeding values for residual feed intake in crossbred beef cattle1
Mujibi, F. D. N., Nkrumah, J. D., Durunna, O. N., et al. (2011) · Journal of Animal Science · doi:10.2527/jas.2010-3361 · Cited by 60 · see citing works
Flay, H., Kuhn‐Sherlock, B., Macdonald, K. A., Camara, M. D., Lopez-Villalobos, N., Donaghy, D. J., & Roche, J. R. (2019) · Journal of Dairy Science · doi:10.3168/jds.2018-15234 · Cited by 60 · see citing works
Invited review: Determination of large-scale individual dry matter intake phenotypes in dairy cattle
Seymour, D. J., Cánovas, Á., Baes, C. F., Chud, T. C. S., Osborne, V. R., Cant, J. P., Brito, L. F., Gredler, B., Finocchiaro, R., Veerkamp, R. F., et al. (2019) · Journal of Dairy Science · doi:10.3168/jds.2019-16454 · Cited by 60 · see citing works
Self-citationOn the value of the phenotypes in the genomic era
González-Recio, Ó., Coffey, M. P., & Pryce, J. E. (2014) · Journal of Dairy Science · doi:10.3168/jds.2014-8125 · Cited by 56 · see citing works
Manafiazar, G., Goonewardene, L. A., Miglior, F., et al. (2015) · animal · doi:10.1017/s1751731115002281 · Cited by 56 · see citing works
Self-citationGenetic parameters for feed intake and feed efficiency in growing dairy heifers
Korver, S., van Eekelen, E. A. M., Vos, H., et al. (1991) · Livestock Production Science · doi:10.1016/0301-6226(91)90119-b · Cited by 55 · see citing works
Salleh, S. M., Mazzoni, G., Løvendahl, P., & Kadarmideen, H. N. (2018) · BMC Bioinformatics · doi:10.1186/s12859-018-2553-z · Cited by 55 · see citing works
Byskov, M. V., Fogh, A., & Løvendahl, P. (2017) · Journal of Dairy Science · doi:10.3168/jds.2016-12511 · Cited by 53 · see citing works
Symposium review: Building a better cow—The Australian experience and future perspectives
Pryce, J. E., Nguyen, T. T. T., Axford, M., Nieuwhof, G. J., & Shaffer, M. (2018) · Journal of Dairy Science · doi:10.3168/jds.2017-13377 · Cited by 53 · see citing works
Zhou, Y., Connor, E. E., Wiggans, G. R., et al. (2018) · BMC Genomics · doi:10.1186/s12864-018-4699-5 · Cited by 53 · see citing works
Mäntysaari, P., Liinamo, A.-E., & Mäntysaari, E. A. (2012) · Journal of Dairy Science · doi:10.3168/jds.2011-4685 · Cited by 51 · see citing works
McParland, S., Banos, G., McCarthy, B., et al. (2012) · Journal of Dairy Science · doi:10.3168/jds.2012-5406 · Cited by 51 · see citing works
Wallen, S. E., Prestløkken, E., Meuwissen, T. H. E., et al. (2018) · Journal of Dairy Science · doi:10.3168/jds.2017-13874 · Cited by 51 · see citing works
Forage Intake and Efficiency of Feed Utilization in Dairy Cattle
Stone, J. B., Trimberger, G. W., Henderson, C. E., et al. (1960) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(60)90314-3 · Cited by 50 · see citing works
Connor, E. E., Hutchison, J. L., Tassell, C. P. V., et al. (2019) · Journal of Dairy Science · doi:10.3168/jds.2018-15407 · Cited by 50 · see citing works
Gómez, E. S., Bellocchio, L., & Marsicano, G. (2014) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2014.09.023 · Cited by 48 · see citing works
Inter-relationships among alternative definitions of feed efficiency in grazing lactating dairy cows
Hurley, A., Lopez-Villalobos, N., McParland, S., Kennedy, E., Lewis, E., O'Donovan, M., Burke, J. L., & Berry, D. P. (2015) · Journal of Dairy Science · doi:10.3168/jds.2015-9928 · Cited by 48 · see citing works
Genome-wide association analyses based on a multiple-trait approach for modeling feed efficiency
Lu, Y., VandeHaar, M. J., Spurlock, D. M., WEIGEL, K. A., Armentano, L. E., Connor, E. E., Coffey, M. P., Veerkamp, R. F., de Haas, Y., Staples, C. R., et al. (2018) · Journal of Dairy Science · doi:10.3168/jds.2017-13364 · Cited by 47 · see citing works
Can greenhouse gases in breath be used to genetically improve feed efficiency of dairy cows?
Difford, G. F., Løvendahl, P., Veerkamp, R. F., Bovenhuis, H., Visker, M. H. P. W., Lassen, J., & de Haas, Y. (2020) · Journal of Dairy Science · doi:10.3168/jds.2019-16966 · Cited by 44 · see citing works
Estimation of genomic breeding values for residual feed intake in a multibreed cattle population1
Khansefid, M., Pryce, J. E., Bolormaa, S., Miller, S. P., Wang, Z., Li, C., & Goddard, M. E. (2014) · Journal of Animal Science · doi:10.2527/jas.2014-7375 · Cited by 41 · see citing works
Genome‐wide association studies pathway‐based meta‐analysis for residual feed intake in beef cattle
Duarte, D. A. S., Newbold, C. J., Detmann, E., Silva, F. F. E., Freitas, P. H. F., Veroneze, R., & Duarte, M. D. S. (2019) · Animal Genetics · doi:10.1111/age.12761 · Cited by 41 · see citing works
Self-citationWang, X. Q., & Kadarmideen, H. N. (2019) · Metabolites · doi:10.3390/metabo9070151 · Cited by 41 · see citing works
An alternative approach to modeling genetic merit of feed efficiency in dairy cattle
Lu, Y., VandeHaar, M. J., Spurlock, D. M., et al. (2015) · Journal of Dairy Science · doi:10.3168/jds.2015-9414 · Cited by 39 · see citing works
Fischer, A., Friggens, N. C., Berry, D. P., et al. (2017) · animal · doi:10.1017/s1751731117003214 · Cited by 39 · see citing works
Tetens, J., Thaller, G. E., & Krattenmacher, N. (2013) · Journal of Dairy Science · doi:10.3168/jds.2013-7301 · Cited by 38 · see citing works
de Almeida, R. T. R., do Prado, R. M., Porto, C., dos Santos, G. T., Huws, S., & Pilau, E. J. (2018) · Scientific Reports · doi:10.1038/s41598-018-36196-4 · Cited by 38 · see citing works
Khansefid, M., Millen, C. A., Chen, Y., Pryce, J. E., Chamberlain, A. J., Jagt, C. J. V., Gondro, C., & Goddard, M. E. (2017) · Journal of Animal Science · doi:10.2527/jas2016.1320 · Cited by 35 · see citing works
Lin, Z., MacLeod, I. M., & Pryce, J. E. (2013) · Journal of Dairy Science · doi:10.3168/jds.2012-6134 · Cited by 34 · see citing works
Fonseca, P. A. D. S., Santos, F. C. D., Lam, S., Suárez‐Vega, A., Miglior, F., Schenkel, F. S., Diniz, L. D. A. F., Id‐Lahoucine, S., Carvalho, M. R. S., & Cánovas, Á. (2018) · Journal of Animal Science · doi:10.1093/jas/sky382 · Cited by 34 · see citing works
Self-citationFromont, C., Adair, K. L., & Douglas, A. E. (2019) · Molecular Ecology · doi:10.1111/mec.15041 · Cited by 34 · see citing works
Pszczoła, M., Strabel, T., van Arendonk, J. A. M., et al. (2012) · Journal of Dairy Science · doi:10.3168/jds.2012-5550 · Cited by 33 · see citing works
Measuring residual feed intake in dairy heifers fed an alfalfa (Medicago sativa) cube diet
Waghorn, G. C., Macdonald, K. A., Williams, Y. J., et al. (2012) · Journal of Dairy Science · doi:10.3168/jds.2011-4670 · Cited by 32 · see citing works
The dynamic behavior of feed efficiency in primiparous dairy cattle
Seymour, D. J., Cánovas, Á., Chud, T. C. S., Cant, J. P., Osborne, V. R., Baes, C. F., Schenkel, F. S., & Miglior, F. (2019) · Journal of Dairy Science · doi:10.3168/jds.2019-17414 · Cited by 32 · see citing works
Self-citationde Ondarza, M. B., & Tricárico, J. M. (2017) · The Professional Animal Scientist · doi:10.15232/pas.2017-01624 · Cited by 30 · see citing works
Bilal, G., Cue, R. I., & Hayes, J. (2016) · Canadian Journal of Animal Science · doi:10.1139/cjas-2015-0127 · Cited by 28 · see citing works
Vallimont, J. E., Dechow, C. D., Daubert, J., et al. (2012) · Journal of Dairy Science · doi:10.3168/jds.2012-5712 · Cited by 27 · see citing works
Physiological and metabolic aspects of feed intake control.
Forbes, J. M. (2009) · CABI eBooks · doi:10.1079/9780851993782.0319 · Cited by 26 · see citing works
Liinamo, A.-E., Mäntysaari, P., Lidauer, M., et al. (2015) · Acta Agriculturae Scandinavica Section A – Animal Science · doi:10.1080/09064702.2015.1070897 · Cited by 26 · see citing works
Technical note: Prediction of liveweight from linear conformation traits in dairy cattle
Banos, G., & Coffey, M. P. (2012) · Journal of Dairy Science · doi:10.3168/jds.2011-4838 · Cited by 25 · see citing works
Genetic Aspects of the Efficiency of Nutrient Utilization for Milk Production
Freeman, A. E. (1967) · Journal of Animal Science · doi:10.2527/jas1967.265976x · Cited by 25 · see citing works
Santschi, D. E., Lefebvre, D., Cue, R. I., et al. (2011) · Journal of Dairy Science · doi:10.3168/jds.2010-3596 · Cited by 24 · see citing works
Does the rumen microbiome play a role in feed efficiency of beef cattle?1
Li, F., Zhou, M., Ominski, K., & Guan, L. L. (2016) · Journal of Animal Science · doi:10.2527/jas.2016-0524 · Cited by 23 · see citing works
Köck, A., Ledinek, M., Gruber, L., et al. (2017) · Journal of Dairy Science · doi:10.3168/jds.2017-13281 · Cited by 23 · see citing works
Genetic parameters in the feed conversion complex of primiparous cows in the first two trimesters
Svendsen, M., Skipenes, P., & Mao, I. L. (1993) · Journal of Animal Science · doi:10.2527/1993.7171721x · Cited by 22 · see citing works
Ho, C. K. M., Malcolm, B., & Doyle, P. T. (2013) · Animal Production Science · doi:10.1071/an12140 · Cited by 22 · see citing works
Negussie, E., Mehtiö, T., Mäntysaari, P., et al. (2019) · Journal of Dairy Science · doi:10.3168/jds.2018-16020 · Cited by 22 · see citing works
A glimpse of the future in animal nutrition science. 1. Past and future challenges
Tedeschi, L. O., Almeida, A. K., Atzori, A. S., MUIR, J. P., Fonseca, M. A., & Cannas, A. (2017) · Revista Brasileira de Zootecnia · doi:10.1590/s1806-92902017000500011 · Cited by 19 · see citing works
Zhang, J., Shi, H., Li, S., Cao, Z., Yang, H., & Wang, Y. (2018) · Journal of Proteomics · doi:10.1016/j.jprot.2018.12.026 · Cited by 19 · see citing works
Landscape of copy number variations in Bos taurus: individual – and inter-breed variability
Mielczarek, M., Frąszczak, M., Nicolazzi, E. L., Williams, J. L., & Szyda, J. (2018) · BMC Genomics · doi:10.1186/s12864-018-4815-6 · Cited by 18 · see citing works
Bottje, W. G. (2019) · Journal of Animal Science · doi:10.1093/jas/skz219 · Cited by 17 · see citing works
Jensen, J., Hohenboken, W. D., Madsen, P., et al. (1995) · Acta Agriculturae Scandinavica Section A – Animal Science · doi:10.1080/09064709509415835 · Cited by 15 · see citing works
Ang, S. Y., Hutchinson, D. S., Evans, B. A., et al. (2016) · Naunyn-Schmiedeberg s Archives of Pharmacology · doi:10.1007/s00210-016-1321-8 · Cited by 12 · see citing works
Mammary cell turnover: relevance to lactation persistency and dry period management
Capuco, A. V., Annen, E. L., Fitzgerald, A. C., et al. (2006) · Wageningen Academic Publishers eBooks · doi:10.3920/9789086865666_015 · Cited by 11 · see citing works
Genetic regulation of prepartum dry matter intake in Holstein cows
Shonka, B. N., Tao, S., Dahl, G. E., et al. (2015) · Journal of Dairy Science · doi:10.3168/jds.2015-9675 · Cited by 9 · see citing works
Guidelines to measure individual feed intake of dairy cows for genomic and genetic evaluations
Veerkamp, R. F., de Haas, Y., Pryce, J. E., et al. (2015) · Socio-Environmental Systems Modeling · Cited by 2 · see citing works
Seymour, D. J., Miglior, F., Fonseca, P. A. D. S., et al. (2018) · Journal of Animal Science · doi:10.1093/jas/sky404.319 · Cited by 1 · see citing works
Self-citation
Flagged first, then by citations
Research works printed but not linked: 6
- Benson, A.K., Kelly, S.A., Legge, R., Ma, F., Low, S. J., Kim, J., Zhang, M., Oh, P. L., Nehrenberg, D., Hua, K., Kachman, S. D., Moriyama, E. N., Walter, J., Peterson, D. A., and Pomp, D. 2010. Individuality in gut microbiota composition is a complex polygenic Canovas, A., Casellas, J., Thomas, M., Medrano, J.F. 2017. Applying new genomic technologies to accelerate genetic improvement in beef and dairy cattle. Proc. Assoc. Advmt. Anim. Breed. Genet. 22:377-383
- de Jong, G., Schopen, G.C.B., Bouwmeester-Vosman, J.J., van der Linde, C., de Haas, Y., and Veerkamp, R.F. 2019. Feed intake genetic evaluation: porgress and an index for saved feed costs. Interbull Bulletin No. 55, Cincinatti, OH, USA.
- Erbe, M., Hayes, B.J., Matukumalli, L.K., Goswami, S., Bowman, P.J., Reich, C.M., Mason, B.A., and Goddard, M.E. 2012. Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels. J. Dairy Sci., 95(7):4114-4129.
- Pryce, J.E., Arias, J., Bowman, P.J., Davis, S.R., Macdonald, K.A., Waghorn, G.C., Wales, W.J., Williams, Y.J., Spelman, R.J., and Hayes, B.J. 2012. Accuracy of genomic predictions of residual feed intake and 250-day bodyweight in growing heifers using 625,000 SNP markers. J. Dairy Sci., 95(4):2108-2119.
- Rosen, B., Bickhart, D., Schnabel, R., Koren, S., Elsik, C., Zimin, A., Dreischer, C., Schultheiss, S., Hall, R., Schroeder, S., Van Tassell, C., Smith, T., and Medrano, J. 2018. Modernizing the Bovine Reference Genome Assembly. In: Proc. World Congr. Genet. Appl. to Livest. Prod. 802, Auckland, New Zealand.
- Wolc, A., Arango, J., Settar, P., Fulton, J.E., O'Sullivan, N.P., Preisinger, R., Habier, D., Fernando, R., Garrick, D.J., Hill, W.G., and Dekkers, J.C.M. 2012. Genome-wide association analysis and genetic architecture of egg weight and egg uniformity in layer chickens. Anim. Genet. 43(1):87-96.
Cited by
Sorted by citations
Hassan, F.-U., Arshad, M. A., Ebeid, H. M., Rehman, M. S.-U., Khan, M. S., Shahid, S., & Yang, C. (2020) · Frontiers in Veterinary Science · doi:10.3389/fvets.2020.575801 · Cited by 160 · see citing works
- Authors
- Brito, L. F., Oliveira, H. R., Houlahan, K., Fonseca, P. A. S., Lam, S., Butty, A. M., Seymour, D. J., Vargas, G., Chud, T. C. S., Silva, F. F., Baes, C. F., Cánovas, A., Miglior, F., & Schenkel, F. S.
- Affiliations
- Purdue University West Lafayette (US)
- University of Guelph (CA)
- Centre for Genetic Improvement of Livestock, Department of Animal Biosciences, University of Guelph, Guelph, ON N1G 2W1, Canada.
- Universidade Federal de Viçosa (BR)
- University of Bern (CH)
- Corresponding author
- Baes, Christine F.
- Miglior, Filippo
- ORCID
- Venue
- Canadian Journal of Animal Science
- Publisher
- Canadian Science Publishing
- Published
- 2020-12-01
- Volume
- 100
- Issue
- 4
- Pages
- 587-604
- ISSN
- 0008-3984 (ISSN-L)
- 1918-1825
- OpenAlex
- W3049342574
- Cited by
- 53
- References
- 137
- Citations by year
- 2026: 4 · 2025: 5 · 2024: 10 · 2023: 14 · 2022: 14 · 2021: 5 · 2020: 1
- FWCI
- 4.98
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Locations
- Canadian Journal of Animal Science (publishedVersion, cc-by)
- TSpace (University of Toronto) (acceptedVersion)
- Bern Open Repository and Information System (University of Bern) (submittedVersion, other-oa)
- Open Access CRIS of the University of Bern
- Funders
- U.S. Department of Agriculture
- Aarhus Universitet
- Genome Canada
- Dairy Farmers of Canada
- Alberta Agriculture and Forestry
- Ontario Genomics
- Ontario Ministry of Agriculture, Food and Rural Affairs
- Ministry of Agriculture, Food and Rural Affairs
- Genome Alberta
- Agricultural Research Service
- Agriculture and Agri-Food Canada
- Ontario Ministry of Research and Innovation
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and phenotypic traits in livestock
- Life Sciences › Agricultural and Biological Sciences › Agronomy and Crop Science › Ruminant Nutrition and Digestive Physiology
- Life Sciences › Agricultural and Biological Sciences › Agronomy and Crop Science › Reproductive Physiology in Livestock
- Keywords
- feed efficiency, genomic selection, dairy cattle, ruminant metabolism, heritability, training population, high-throughput phenotyping, omics technologies, indicator traits, genetic advance
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review