Harnessing genomic information for livestock improvement
Open accessAbstract
The world demand for animal-based food products is anticipated to increase by 70% by 2050. Meeting this demand in a way that has a minimal impact on the environment will require the implementation of advanced technologies, and methods to improve the genetic quality of livestock are expected to play a large part. Over the past 10 years, genomic selection has been introduced in several major livestock species and has more than doubled genetic progress in some. However, additional improvements are required. Genomic information of increasing complexity (including genomic, epigenomic, transcriptomic and microbiome data), combined with technological advances for its cost-effective collection and use, will make a major contribution.
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A global reference for human genetic variation
The 1000 Genomes Project Consortium, authors, C., Auton, A., Abecasis, G. R., Steering committee, Altshuler, D. M., Durbin, R. M., Abecasis, G. R., Bentley, D. R., Chakravarti, A., et al. (2015) · Nature · doi:10.1038/nature15393 · Cited by 18,247 · see citing works
Multiplex Genome Engineering Using CRISPR/Cas Systems
Cong, L., Ran, F. A., Cox, D., Lin, S., Barretto, R., Habib, N., Hsu, P. D., Wu, X., Jiang, W., Marraffini, L. A., et al. (2013) · Science · doi:10.1126/science.1231143 · Cited by 15,339 · see citing works
Analysis of protein-coding genetic variation in 60,706 humans
Exome Aggregation Consortium, Lek, M., Karczewski, K. J., Minikel, E. V., Samocha, K. E., Banks, E., Fennell, T., O’Donnell-Luria, A. H., Ware, J. S., Hill, A. J., et al. (2016) · Nature · doi:10.1038/nature19057 · Cited by 9,587 · see citing works
Prediction of Total Genetic Value Using Genome-Wide Dense Marker Maps
Meuwissen, T. H. E., Hayes, B. J., & Goddard, M. E. (2001) · Genetics · doi:10.1093/genetics/157.4.1819 · Cited by 7,917 · see citing works
Self-citationGenetics and Analysis of Quantitative Traits
(2002) · Journal of Animal Breeding and Genetics · doi:10.1046/j.1439-0388.2002.00356.x · Cited by 6,172 · see citing works
Efficient Methods to Compute Genomic Predictions
VanRaden, P. M. (2008) · Journal of Dairy Science · doi:10.3168/jds.2007-0980 · Cited by 6,050 · see citing works
Viable offspring derived from fetal and adult mammalian cells
Wilmut, I., Schnieke, A., McWhir, J., Kind, A., & Campbell, K. (1997) · Nature · doi:10.1038/385810a0 · Cited by 4,976 · see citing works
Common SNPs explain a large proportion of the heritability for human height
Yang, J., Benyamin, B., McEvoy, B. P., Gordon, S., Henders, A. K., Nyholt, D. R., Madden, P. A., Heath, A. C., Martin, N. G., Montgomery, G. W., et al. (2010) · Nature Genetics · doi:10.1038/ng.608 · Cited by 4,446 · see citing works
Genetic effects on gene expression across human tissues
GTEx Consortium (2017) · Nature · doi:10.1038/nature24277 · Cited by 4,036 · see citing works
Wang, H., Yang, H., Shivalila, C. S., Dawlaty, M. M., Cheng, A. W., Zhang, F., & Jaenisch, R. (2013) · Cell · doi:10.1016/j.cell.2013.04.025 · Cited by 3,495 · see citing works
International Chicken Genome Sequencing Consortium (2004) · Nature · doi:10.1038/nature03154 · Cited by 2,750 · see citing works
Coefficients of Inbreeding and Relationship
Wright, S. (1922) · The American Naturalist · doi:10.1086/279872 · Cited by 2,307 · see citing works
Livestock production: recent trends, future prospects
Thornton, P. K. (2010) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2010.0134 · Cited by 2,217 · see citing works
Genetics and analysis of quantitative traits
Ewens, W. J. (1999) · American Journal of Human Biology · doi:10.1002/(sici)1520-6300(199911/12)11:6 · Cited by 2,084 · see citing works
Double muscling in cattle due to mutations in the myostatin gene
McPherron, A. C., & Lee, S.-J. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.23.12457 · Cited by 2,039 · see citing works
Association of Trypanolytic ApoL1 Variants with Kidney Disease in African Americans
Genovese, G., Friedman, D. J., Ross, M. D., Lecordier, L., Uzureau, P., Freedman, B. I., Bowden, D. W., Langefeld, C. D., Oleksyk, T. K., Uscinski Knob, A. L., et al. (2010) · Science · doi:10.1126/science.1193032 · Cited by 2,028 · see citing works
Genomic Selection in Plant Breeding: Methods, Models, and Perspectives
Crossa, J., Pérez-Rodríguez, P., Cuevas, J., Montesinos-López, O., Jarquín, D., de los Campos, G., Burgueño, J., González-Camacho, J. M., Pérez-Elizalde, S., Beyene, Y., et al. (2017) · Trends in Plant Science · doi:10.1016/j.tplants.2017.08.011 · Cited by 1,839 · see citing works
A deletion in the bovine myostatin gene causes the double–muscled phenotype in cattle
Grobet, L., Royo Martin, L. J., Poncelet, D., Pirottin, D., Brouwers, B., Riquet, J., Schoeberlein, A., Dunner, S., Ménissier, F., Massabanda, J., et al. (1997) · Nature Genetics · doi:10.1038/ng0997-71 · Cited by 1,556 · see citing works
Self-citationAguilar, I., Misztal, I., Johnson, D. L., Legarra, A., Tsuruta, S., & Lawlor, T. J. (2010) · Journal of Dairy Science · doi:10.3168/jds.2009-2730 · Cited by 1,499 · see citing works
Identification of a Mutation in Porcine Ryanodine Receptor Associated with Malignant Hyperthermia
Fujii, J., Otsu, K., Zorzato, F., et al. (1991) · Science · doi:10.1126/science.1862346 · Cited by 1,485 · see citing works
Analyses of pig genomes provide insight into porcine demography and evolution
Groenen, M. A. M., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Denis Milan, A., Megens, H., et al. (2012) · Nature · doi:10.1038/nature11622 · Cited by 1,386 · see citing works
Palmiter, R. D., Brinster, R. L., Hammer, R. E., Trumbauer, M. E., Rosenfeld, M. G., Birnberg, N. C., & Evans, R. M. (1982) · Nature · doi:10.1038/300611a0 · Cited by 1,341 · see citing works
The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution
The Bovine Genome Sequencing and Analysis Consortium, Elsik, C. G., Tellam, R. L., Worley, K. C., Gibbs, R. A., Muzny, D. M., Weinstock, G. M., Adelson, D. L., Eichler, E. E., Elnitski, L., et al. (2009) · Science · doi:10.1126/science.1169588 · Cited by 1,287 · see citing works
A Systematic Survey of Loss-of-Function Variants in Human Protein-Coding Genes
MacArthur, D. G., Balasubramanian, S., Frankish, A., Huang, N., Morris, J., Walter, K., Jostins, L., Habegger, L., Pickrell, J. K., Montgomery, S. B., et al. (2012) · Science · doi:10.1126/science.1215040 · Cited by 1,272 · see citing works
Clop, A., Marcq, F., Takeda, H., Pirottin, D., Tordoir, X., Bibé, B., Bouix, J., Caiment, F., Elsen, J.-M., Eychenne, F., et al. (2006) · Nature Genetics · doi:10.1038/ng1810 · Cited by 1,260 · see citing works
Self-citationExtension of the bayesian alphabet for genomic selection
Habier, D., Fernando, R. L., Kızılkaya, K., & Garrick, D. J. (2011) · BMC Bioinformatics · doi:10.1186/1471-2105-12-186 · Cited by 1,234 · see citing works
Mutations in <i>myostatin</i> ( <i>GDF8</i> ) in Double-Muscled Belgian Blue and Piedmontese Cattle
Kambadur, R., Sharma, M., Smith, T. P. L., & Bass, J. J. (1997) · Genome Research · doi:10.1101/gr.7.9.910 · Cited by 1,204 · see citing works
A guide to genome engineering with programmable nucleases
Kim, S., & Kim, J. (2014) · Nature Reviews Genetics · doi:10.1038/nrg3686 · Cited by 1,162 · see citing works
In vivo genome editing via CRISPR/Cas9 mediated homology-independent targeted integration
Suzuki, K., Tsunekawa, Y., Hernandez-Benitez, R., Wu, J., Zhu, J., Kim, E. J., Hatanaka, F., Yamamoto, M., Araoka, T., Li, Z., et al. (2016) · Nature · doi:10.1038/nature20565 · Cited by 1,150 · see citing works
Whole-genome resequencing reveals loci under selection during chicken domestication
Rubin, C.-J., Zody, M. C., Eriksson, J., Meadows, J. R. S., Sherwood, E., Webster, M. T., Jiang, L., Ingman, M., Sharpe, T., Ka, S., et al. (2010) · Nature · doi:10.1038/nature08832 · Cited by 1,138 · see citing works
Galloway, S., McNatty, K. P., Cambridge, L. M., et al. (2000) · Nature Genetics · doi:10.1038/77033 · Cited by 1,111 · see citing works
A high-resolution map of human evolutionary constraint using 29 mammals
Broad Institute Sequencing Platform and Whole Genome Assembly Team, Lindblad-Toh, K., Baylor College of Medicine Human Genome Sequencing Center Sequencing Team, Genome Institute at Washington University, Garber, M., Zuk, O., Lin, M. F., Parker, B. J., Washietl, S., Kheradpour, P., et al. (2011) · Nature · doi:10.1038/nature10530 · Cited by 1,108 · see citing works
The genomic landscape of Neanderthal ancestry in present-day humans
Sankararaman, S., Mallick, S., Dannemann, M., Prüfer, K., Kelso, J., Pääbo, S., Patterson, N., & Reich, D. (2014) · Nature · doi:10.1038/nature12961 · Cited by 1,107 · see citing works
Mapping genes for complex traits in domestic animals and their use in breeding programmes
Goddard, M. E., & Hayes, B. J. (2009) · Nature Reviews Genetics · doi:10.1038/nrg2575 · Cited by 1,100 · see citing works
Self-citationGenomic selection: prediction of accuracy and maximisation of long term response
Goddard, M. E. (2008) · Genetica · doi:10.1007/s10709-008-9308-0 · Cited by 1,094 · see citing works
Production of transgenic rabbits, sheep and pigs by microinjection
Hammer, R. E., Pursel, V. G., Rexroad, C. E., et al. (1985) · Nature · doi:10.1038/315680a0 · Cited by 1,080 · see citing works
The Atlantic salmon genome provides insights into rediploidization
Lien, S., Koop, B. F., Sandve, S. R., Miller, J. R., Kent, M., Nome, T., Hvidsten, T. R., Leong, J. S., Minkley, D. R., Zimin, A. V., et al. (2016) · Nature · doi:10.1038/nature17164 · Cited by 1,043 · see citing works
Data and Theory Point to Mainly Additive Genetic Variance for Complex Traits
Hill, W. G., Goddard, M. E., & Visscher, P. M. (2008) · PLoS Genetics · doi:10.1371/journal.pgen.1000008 · Cited by 1,039 · see citing works
CRISPR-Based Technologies for the Manipulation of Eukaryotic Genomes
Komor, A. C., Badran, A. H., & Liu, D. R. (2016) · Cell · doi:10.1016/j.cell.2016.10.044 · Cited by 1,011 · see citing works
Grisart, B., Coppieters, W. R., Farnir, F., Karim, L., Ford, C. A., Berzi, P., Cambisano, N., Mni, M., Reid, S. J., Simon, P., et al. (2002) · Genome Research · doi:10.1101/gr.224202 · Cited by 967 · see citing works
Self-citationA regulatory mutation in IGF2 causes a major QTL effect on muscle growth in the pig
Laere, A.-S. V., Nguyen, M. Q., Braunschweig, M., Nezer, C., Collette, C., Moreau, L., Archibald, A. L., Haley, C., Buys, N., Tally, M., et al. (2003) · Nature · doi:10.1038/nature02064 · Cited by 949 · see citing works
Self-citationEver-Changing Landscapes: Transcriptional Enhancers in Development and Evolution
Long, H. K., Prescott, S. L., & Wysocka, J. (2016) · Cell · doi:10.1016/j.cell.2016.09.018 · Cited by 945 · see citing works
Kijas, J., Lenstra, J. A., Hayes, B. J., Boitard, S., Neto, L. R. P., Cristobal, M. S., Servin, B., McCulloch, R. J., Whan, V., Gietzen, K. J., et al. (2012) · PLoS Biology · doi:10.1371/journal.pbio.1001258 · Cited by 915 · see citing works
Self-citationGenomic prediction when some animals are not genotyped
Christensen, O. F., & Lund, M. S. (2010) · Genetics Selection Evolution · doi:10.1186/1297-9686-42-2 · Cited by 909 · see citing works
Hanrahan, J. P., Gregan, S. M., Mulsant, P., et al. (2004) · Biology of Reproduction · doi:10.1095/biolreprod.103.023093 · Cited by 873 · see citing works
Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds
The Bovine HapMap Consortium, Gibbs, R. A., Taylor, J. F., Van Tassell, C. P., Barendse, W., Eversole, K. A., Gill, C. A., Green, R. D., Hamernik, D. L., Kappes, S. M., et al. (2009) · Science · doi:10.1126/science.1167936 · Cited by 868 · see citing works
Self-citationHavenstein, G., Ferket, P., & Qureshi, M. (2003) · Poultry Science · doi:10.1093/ps/82.10.1500 · Cited by 861 · see citing works
Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle
Daetwyler, H. D., Capitan, A., Pausch, H., Stothard, P., van Binsbergen, R., Brøndum, R. F., Liao, X., Djari, A., Rodriguez, S. C., Grohs, C., et al. (2014) · Nature Genetics · doi:10.1038/ng.3034 · Cited by 838 · see citing works
Self-citationEnhancer Evolution across 20 Mammalian Species
Villar, D., Berthelot, C., Aldridge, S., Rayner, T. F., Lukk, M., Pignatelli, M., Park, T. J., Deaville, R., Erichsen, J. T., Jasinska, A. J., et al. (2015) · Cell · doi:10.1016/j.cell.2015.01.006 · Cited by 825 · see citing works
Estimators for pairwise relatedness and individual inbreeding coefficients
Ritland, K. (1996) · Genetics Research · doi:10.1017/s0016672300033620 · Cited by 785 · see citing works
SIRE EVALUATION AND GENETIC TRENDS
Henderson, C. (1973) · Journal of Animal Science · doi:10.1093/ansci/1973.symposium.10 · Cited by 777 · see citing works
[Environment favorable to female physicians: introduction].
Kawashiro, N., Iino, Y., Kudo, F., & Suzuka, Y. (2010) · PubMed · doi:10.3950/jibiinkoka.113.719 · Cited by 776 · see citing works
Accuracy of Predicting the Genetic Risk of Disease Using a Genome-Wide Approach
Daetwyler, H. D., Villanueva, B., & Woolliams, J. A. (2008) · PLoS ONE · doi:10.1371/journal.pone.0003395 · Cited by 721 · see citing works
A Mutation in PRKAG3 Associated with Excess Glycogen Content in Pig Skeletal Muscle
Denis Milan, A., Jeon, J., Looft, C., Amarger, V., Robic, A., Thelander, M., Rogel-Gaillard, C., Paul, S., Iannuccelli, N., Rask, L., et al. (2000) · Science · doi:10.1126/science.288.5469.1248 · Cited by 717 · see citing works
Linking disease associations with regulatory information in the human genomePreprint
Schaub, M. A., Boyle, A. P., Kundaje, A. B., Batzoglou, S., & Snyder, M. P. (2012) · Genome Research · doi:10.1101/gr.136127.111 · Cited by 715 · see citing works
Pitfalls of predicting complex traits from SNPs
Wray, N. R., Yang, J., Hayes, B. J., Price, A. L., Goddard, M. E., & Visscher, P. M. (2013) · Nature Reviews Genetics · doi:10.1038/nrg3457 · Cited by 672 · see citing works
Self-citationLes mathématiques de l'hérédité
Malécot, G. (1948) · Masson eBooks · Cited by 669 · see citing works
Increased accuracy of artificial selection by using the realized relationship matrix
Hayes, B. J., Visscher, P. M., & Goddard, M. E. (2009) · Genetics Research · doi:10.1017/s0016672308009981 · Cited by 665 · see citing works
Self-citationErbe, M., Hayes, B. J., Matukumalli, L. K., Goswami, S., Bowman, P. J., Reich, C. M., Mason, B., & Goddard, M. E. (2012) · Journal of Dairy Science · doi:10.3168/jds.2011-5019 · Cited by 650 · see citing works
Self-citationSex-dependent dominance at a single locus maintains variation in age at maturity in salmon
Barson, N. J., Aykanat, T., Hindar, K., Baranski, M., Bolstad, G. H., Fiske, P., Jacq, C., Jensen, A. J., Johnston, S. E., Karlsson, S., et al. (2015) · Nature · doi:10.1038/nature16062 · Cited by 627 · see citing works
Bickhart, D. M., Rosen, B. D., Koren, S., Sayre, B. L., Hastie, A. R., Chan, S., Lee, J., Lam, E. T., Liachko, I., Sullivan, S. T., et al. (2017) · Nature Genetics · doi:10.1038/ng.3802 · Cited by 620 · see citing works
Fine-mapping inflammatory bowel disease loci to single-variant resolution
International Inflammatory Bowel Disease Genetics Consortium, Huang, H., Fang, M., Jostins, L., Umićević Mirkov, M., Boucher, G., Anderson, C. A., Andersen, V., Cleynen, I., Cortes, A., et al. (2017) · Nature · doi:10.1038/nature22969 · Cited by 611 · see citing works
Self-citationMutations affecting fitness in Drosophila populations.
Simmons, M. J., & Crow, J. F. (1977) · Annual Review of Genetics · doi:10.1146/annurev.ge.11.120177.000405 · Cited by 584 · see citing works
García-Ruíz, A., Cole, J. B., VanRaden, P. M., Wiggans, G. R., Lopez, F. J., & Tassell, C. P. V. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1519061113 · Cited by 574 · see citing works
Economic aspects of mastitis: New developments
Hogeveen, H., Huijps, K., & Lam, T. (2011) · New Zealand Veterinary Journal · doi:10.1080/00480169.2011.547165 · Cited by 566 · see citing works
Fertility in the high-producing dairy cow
Pryce, J. E., Royal, M. D., Garnsworthy, P. C., & Mao, I. L. (2003) · Livestock Production Science · doi:10.1016/s0301-6226(03)00145-3 · Cited by 555 · see citing works
Dong, Y., Xie, M., Jiang, Y., Xiao, N., Du, X., Zhang, W., Tosser‐Klopp, G., Wang, J., Yang, S., Liang, J., et al. (2012) · Nature Biotechnology · doi:10.1038/nbt.2478 · Cited by 524 · see citing works
The sheep genome illuminates biology of the rumen and lipid metabolism
Jiang, Y., Xie, M., Chen, W., Talbot, R., Maddox, J. F., Faraut, T., Wu, C., Muzny, D. M., Li, Y., Zhang, W., et al. (2014) · Science · doi:10.1126/science.1252806 · Cited by 514 · see citing works
Accuracy of genomic breeding values in multi-breed dairy cattle populations
Hayes, B. J., Bowman, P. J., Chamberlain, A. C., VERBYLA, K. L., & Goddard, M. E. (2009) · Genetics Selection Evolution · doi:10.1186/1297-9686-41-51 · Cited by 493 · see citing works
Self-citationIpr1 gene mediates innate immunity to tuberculosis
Pan, H., Yan, B., Rojas, M., Shebzukhov, Y. V., Zhou, H., Kobzik, L., Higgins, D. E., Daly, M. J., Bloom, B. R., & Kramnik, I. (2005) · Nature · doi:10.1038/nature03419 · Cited by 471 · see citing works
Grobet, L., Poncelet, D. A., Royo, L. J., Brouwers, B., Pirottin, D., Michaux, C., Ménissier, F., Zanotti, M., Dunner, S., & Georges, M. (1998) · Mammalian Genome · doi:10.1007/s003359900727 · Cited by 471 · see citing works
Self-citationThe mosaic structure of variation in the laboratory mouse genome
Wade, C. M., Kulbokas, E. J., Kirby, A. W., Zody, M. C., Mullikin, J. C., Lander, E. S., Lindblad‐Toh, K., & Daly, M. J. (2002) · Nature · doi:10.1038/nature01252 · Cited by 458 · see citing works
A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms
Wong, G. K., Liu, B., Wang, J., Zhang, Y., Yang, X., Zhang, Z., Meng, Q., Zhou, J., Li, D., Zhang, J., et al. (2004) · Nature · doi:10.1038/nature03156 · Cited by 458 · see citing works
Genetic Engineering of Livestock
Pursel, V. G., Pinkert, C. A., Miller, K. F., et al. (1989) · Science · doi:10.1126/science.2499927 · Cited by 439 · see citing works
First dairying in green Saharan Africa in the fifth millennium bc
Dunne, J., Evershed, R. P., Roffet‐Salque, M., Cramp, L., Bruni, S., Ryan, K., Biagetti, S., & di Lernia, S. (2012) · Nature · doi:10.1038/nature11186 · Cited by 436 · see citing works
Mutations in DMRT3 affect locomotion in horses and spinal circuit function in mice
Andersson, L. S., Larhammar, M., Memic, F., Wootz, H., Schwochow, D., Rubin, C., Patra, K., Árnason, T., Wellbring, L., Hjälm, G., et al. (2012) · Nature · doi:10.1038/nature11399 · Cited by 431 · see citing works
Biochemistry of fish antifreeze proteins
Davies, P. L., & Hew, C. L. (1990) · The FASEB Journal · doi:10.1096/fasebj.4.8.2185972 · Cited by 428 · see citing works
Blott, S. C., Kim, J.-J., Moisio, S., Schmidt‐Küntzel, A., Cornet, A. M., Berzi, P., Cambisano, N., Ford, C. A., Grisart, B., Johnson, D., et al. (2003) · Genetics · doi:10.1093/genetics/163.1.253 · Cited by 417 · see citing works
Self-citationRabbit genome analysis reveals a polygenic basis for phenotypic change during domestication
Carneiro, M., Rubin, C.-J., Di Palma, F., Albert, F. W., Alföldi, J., Barrio, A. M., Pielberg, G., Rafati, N., Sayyab, S., Turner-Maier, J., et al. (2014) · Science · doi:10.1126/science.1253714 · Cited by 404 · see citing works
Bouwman, A. C., Daetwyler, H. D., Chamberlain, A. J., Ponce, C. H., Sargolzaei, M., Schenkel, F. S., Sahana, G., Govignon-Gion, A., Boitard, S., Dolezal, M., et al. (2018) · Nature Genetics · doi:10.1038/s41588-018-0056-5 · Cited by 401 · see citing works
Self-citationPigs expressing salivary phytase produce low-phosphorus manure
Golovan, S. P., Meidinger, R. G., Ajakaiye, A., Cottrill, M., Wiederkehr, M. Z., Barney, D. J., Plante, C., Pollard, J. W., Fan, M. Z., Hayes, M. A., et al. (2001) · Nature Biotechnology · doi:10.1038/90788 · Cited by 387 · see citing works
Production of hornless dairy cattle from genome-edited cell lines
Carlson, D. F., Lancto, C. A., Zang, B., Kim, E.-S., Walton, M., Oldeschulte, D. L., Seabury, C. M., Sonstegard, T. S., & Fahrenkrug, S. C. (2016) · Nature Biotechnology · doi:10.1038/nbt.3560 · Cited by 385 · see citing works
MMEJ-assisted gene knock-in using TALENs and CRISPR-Cas9 with the PITCh systems
Sakuma, T., Nakade, S., Sakane, Y., Suzuki, K., & Yamamoto, T. (2015) · Nature Protocols · doi:10.1038/nprot.2015.140 · Cited by 383 · see citing works
Detection of human adaptation during the past 2000 years
Field, Y., Boyle, E. A., Telis, N., Gao, Z., Gaulton, K. J., Golan, D., Yengo, L., Rocheleau, G., Froguel, P., McCarthy, M. I., et al. (2016) · Science · doi:10.1126/science.aag0776 · Cited by 383 · see citing works
Genomic Selection in Dairy Cattle: The USDA Experience
Wiggans, G. R., Cole, J. B., Hubbard, S. M., & Sonstegard, T. S. (2016) · Annual Review of Animal Biosciences · doi:10.1146/annurev-animal-021815-111422 · Cited by 382 · see citing works
Tait‐Burkard, C., Lillico, S. G., Reid, E., Jackson, B., Mileham, A. J., Aït-Ali, T., Whitelaw, B., & Archibald, A. L. (2017) · PLoS Pathogens · doi:10.1371/journal.ppat.1006206 · Cited by 382 · see citing works
Cohen, M. W., Seroussi, E., Larkin, D. M., Loor, J. J., der Wind, A. E.-V., Lee, J. H., Drackley, J. K., Band, M. R., Hernández, Á. G., Shani, M., et al. (2005) · Genome Research · doi:10.1101/gr.3806705 · Cited by 378 · see citing works
Ai, H., Fang, X., Yang, B. J., Huang, Z., Chen, H., Mao, L., Zhang, F., Zhang, L., Cui, L., He, W., et al. (2015) · Nature Genetics · doi:10.1038/ng.3199 · Cited by 374 · see citing works
Generation of cloned transgenic pigs rich in omega-3 fatty acids
Lai, L., Kang, J. X., Li, R., Wang, J., Witt, W. T., Yong, H. Y., Hao, Y., Wax, D., Murphy, C. N., Rieke, A., et al. (2006) · Nature Biotechnology · doi:10.1038/nbt1198 · Cited by 370 · see citing works
Livestock and the Environment: What Have We Learned in the Past Decade?
Herrero, M., Wirsenius, S., Henderson, B. B., Rigolot, C., Thornton, P. K., Havlík, P., de Boer, I. J. M., & Gerber, P. (2015) · Annual Review of Environment and Resources · doi:10.1146/annurev-environ-031113-093503 · Cited by 359 · see citing works
Whitworth, K. M., Lee, K., Benne, J. A., Beaton, B. P., Spate, L. D., Murphy, S. L., Samuel, M., Mao, J., O’Gorman, C., Walters, E. M., et al. (2014) · Biology of Reproduction · doi:10.1095/biolreprod.114.121723 · Cited by 351 · see citing works
Genetically enhanced cows resist intramammary Staphylococcus aureus infection
Wall, R. J., Powell, A. M., Paape, M. J., Kerr, D. E., Bannerman, D. D., Pursel, V. G., Wells, K. D., Talbot, N. C., & Hawk, H. W. (2005) · Nature Biotechnology · doi:10.1038/nbt1078 · Cited by 344 · see citing works
Production of cattle lacking prion protein
Richt, J. A., Kasinathan, P., Hamir, A. N., Castilla, J., Sathiyaseelan, T., Vargas, F., Sathiyaseelan, J., Wu, H., Matsushita, H., Koster, J. A., et al. (2006) · Nature Biotechnology · doi:10.1038/nbt1271 · Cited by 343 · see citing works
Life history trade-offs at a single locus maintain sexually selected genetic variation
Johnston, S. E., Gratten, J., Bérénos, C., Pilkington, J. G., Clutton-Brock, T. H., Pemberton, J. M., & Slate, J. (2013) · Nature · doi:10.1038/nature12489 · Cited by 343 · see citing works
Frantz, L., Schraiber, J. G., Madsen, O., Megens, H., Cagan, A., Bosse, M., Paudel, Y., Crooijmans, R. P. M. A., Larson, G., & Groenen, M. A. M. (2015) · Nature Genetics · doi:10.1038/ng.3394 · Cited by 342 · see citing works
Highly effective SNP-based association mapping and management of recessive defects in livestock
Charlier, C., Coppieters, W. R., Rollin, F. A., et al. (2008) · Nature Genetics · doi:10.1038/ng.96 · Cited by 330 · see citing works
Self-citationMacLeod, I. M., Bowman, P. J., Jagt, C. J. V., Haile‐Mariam, M., Kemper, K. E., Chamberlain, A. J., Schrooten, C., Hayes, B. J., & Goddard, M. E. (2016) · BMC Genomics · doi:10.1186/s12864-016-2443-6 · Cited by 328 · see citing works
Self-citationHarmful recessive effects on fertility detected by absence of homozygous haplotypes
VanRaden, P. M., Olson, K. M., Null, D. J., et al. (2011) · Journal of Dairy Science · doi:10.3168/jds.2011-4624 · Cited by 324 · see citing works
Karim, L., Takeda, H., Li, L., Druet, T., Arias, J., Baurain, D., Cambisano, N., Davis, S. R., Farnir, F., Grisart, B., et al. (2011) · Nature Genetics · doi:10.1038/ng.814 · Cited by 324 · see citing works
Self-citationPhylogenomic evidence for ancient hybridization in the genomes of living cats (Felidae)Preprint
Li, G., Davis, B. W., Eizirik, E., & Murphy, W. J. (2015) · Genome Research · doi:10.1101/gr.186668.114 · Cited by 322 · see citing works
Quadrupling Muscle Mass in Mice by Targeting TGF-ß Signaling Pathways
Lee, S.-J. (2007) · PLoS ONE · doi:10.1371/journal.pone.0000789 · Cited by 316 · see citing works
The costs of human inbreeding and their implications for variations at the DNA level.
Bittles, A. H., & Neel, J. V. (1994) · Nature Genetics · doi:10.1038/ng1094-117 · Cited by 311 · see citing works
Andersson, L., Archibald, A., Bottema, C., Brauning, R., Burgess, S., Burt, D., Casas, E., Cheng, H. H., Clarke, L., Couldrey, C., et al. (2015) · Genome Biology · doi:10.1186/s13059-015-0622-4 · Cited by 310 · see citing works
Self-citationVariation in actual relationship as a consequence of Mendelian sampling and linkage
Hill, W. W., & Weir, B. (2011) · Genetics Research · doi:10.1017/s0016672310000480 · Cited by 304 · see citing works
The impact of genetic polymorphisms on the protein composition of ruminant milks
Martin, P., Szymanowska, M., Zwierzchowski, L., et al. (2002) · annales de biologie animale biochimie biophysique · doi:10.1051/rnd:2002036 · Cited by 300 · see citing works
Two different bacterial community types are linked with the low-methane emission trait in sheep.
Kittelmann, S., Pinares-Patiño, C. S., Seedorf, H., Kirk, M. R., Ganesh, S., McEwan, J. C., & Janssen, P. H. (2014) · PLoS ONE · doi:10.1371/journal.pone.0103171 · Cited by 277 · see citing works
Deletion of the α(1,3)galactosyl transferase (GGTA1) gene and the prion protein (PrP) gene in sheep
Denning, C. N., Burl, S., Ainslie, A., Bracken, J., Dinnyés, A., Fletcher, J. M., King, T., Ritchie, M., Ritchie, W. A., Rollo, M., et al. (2001) · Nature Biotechnology · doi:10.1038/89313 · Cited by 273 · see citing works
Genome edited sheep and cattle
Proudfoot, C., Carlson, D. F., Huddart, R., Long, C. R., Pryor, J. H., King, T., Lillico, S. G., Mileham, A. J., McLaren, D. G., Whitelaw, B., et al. (2014) · Transgenic Research · doi:10.1007/s11248-014-9832-x · Cited by 270 · see citing works
Cloned transgenic cattle produce milk with higher levels of β-casein and κ-casein
Brophy, B., Smolenski, G., Wheeler, T. T., et al. (2003) · Nature Biotechnology · doi:10.1038/nbt783 · Cited by 266 · see citing works
Polar Overdominance at the Ovine callipyge Locus
Cockett, N., Jackson, S. P., Shay, T. L., Farnir, F., Berghmans, S., Snowder, G. D., Nielsen, D. M., & Georges, M. (1996) · Science · doi:10.1126/science.273.5272.236 · Cited by 265 · see citing works
Self-citationEffect of total allelic relationship on accuracy of evaluation and response to selection.
Nejati‐Javaremi, A., Smith, C. D., & Gibson, J. P. (1997) · Journal of Animal Science · doi:10.2527/1997.7571738x · Cited by 251 · see citing works
Efficient Gene Knockout in Goats Using CRISPR/Cas9 System
Ni, W., Qiao, J., Hu, S., Zhao, X., Regouski, M., Yang, M., Polejaeva, I. A., & Chen, C. (2014) · PLoS ONE · doi:10.1371/journal.pone.0106718 · Cited by 250 · see citing works
核内受容体NR2F2は,マウスMA-10とMLTC-1ライディヒ細胞におけるStar発現とステロイド産生を活性化する
Raifish, E. M.-V., Nicholas, M. R., Luc, J. M., et al. (2014) · Biology of Reproduction · Cited by 243 · see citing works
IBD risk loci are enriched in multigenic regulatory modules encompassing putative causative genes
Momozawa, Y., Dmitrieva, J., Théâtre, E., Deffontaine, V., Rahmouni, S., Charloteaux, B., Crins, F., Docampo, E., Elansary, M., Gori, A.-S., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-04365-8 · Cited by 233 · see citing works
Park, S. D. E., Magee, D. A., McGettigan, P., Teasdale, M. D., Edwards, C. J., Lohan, A. J., Murphy, A., Braud, M., Donoghue, M. T. A., Liu, Y., et al. (2015) · Genome biology · doi:10.1186/s13059-015-0790-2 · Cited by 228 · see citing works
Freking, B. A., Murphy, S. K., Wylie, A. A., Rhodes, S. J., Keele, J. W., Leymaster, K. A., Jirtle, R. L., & Smith, T. P. L. (2002) · Genome Research · doi:10.1101/gr.571002 · Cited by 227 · see citing works
Fernando, R. L., Dekkers, J. C. M., & Garrick, D. J. (2014) · Genetics Selection Evolution · doi:10.1186/1297-9686-46-50 · Cited by 205 · see citing works
Suppression of Avian Influenza Transmission in Genetically Modified Chickens
Lyall, J. W., Irvine, R. M., Sherman, A., et al. (2011) · Science · doi:10.1126/science.1198020 · Cited by 204 · see citing works
Brøndum, R. F., Su, G., Janss, L., Sahana, G., Guldbrandtsen, B., Boichard, D., & Lund, M. S. (2015) · Journal of Dairy Science · doi:10.3168/jds.2014-9005 · Cited by 202 · see citing works
Ayllón, F., Kjærner‐Semb, E., Furmanek, T., Wennevik, V., Solberg, M. F., Dahle, G., Taranger, G. L., Glover, K. A., Almén, M. S., Rubin, C., et al. (2015) · PLoS Genetics · doi:10.1371/journal.pgen.1005628 · Cited by 201 · see citing works
Fritz, S., Capitan, A., Djari, A., Rodriguez, S. C., Barbat, A., Baur, A., Grohs, C., Weiss, B., Boussaha, M., Esquerré, D., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0065550 · Cited by 200 · see citing works
Strategies for the systematic sequencing of complex genomes
Green, E. D. (2001) · Nature Reviews Genetics · doi:10.1038/35084503 · Cited by 195 · see citing works
Zheng, Q., Lin, J., Huang, J., Zhang, H., Zhang, R., Zhang, X., Cao, C., Hambly, C., Qin, G., Yao, J. T., et al. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1707853114 · Cited by 193 · see citing works
Selecting sequence variants to improve genomic predictions for dairy cattle
VanRaden, P. M., Tooker, M. E., O’Connell, J. R., et al. (2017) · Genetics Selection Evolution · doi:10.1186/s12711-017-0307-4 · Cited by 190 · see citing works
Genetic evaluation using single-step genomic best linear unbiased predictor in American Angus1
Lourenco, D. A. L., Tsuruta, S., Fragomeni, B. D. O., Masuda, Y., Aguilar, I., Legarra, A., Bertrand, J. K., Amen, T. S., Wang, L., Moser, D. W., et al. (2015) · Journal of Animal Science · doi:10.2527/jas.2014-8836 · Cited by 185 · see citing works
TALE nickase-mediated SP110 knockin endows cattle with increased resistance to tuberculosis
Wu, H., Wang, Y., Zhang, Y., Yang, M., Lv, J., Liu, J., & Zhang, Y. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1421587112 · Cited by 182 · see citing works
Modulating skeletal muscle mass by postnatal, muscle‐specific inactivation of the myostatin gene
Grobet, L., Pirottin, D., Farnir, F., Poncelet, D. A., Royo, L. J., Brouwers, B., Christians, E., Desmecht, D. J.-M., Coignoul, F. L., Kahn, R., et al. (2003) · genesis · doi:10.1002/gene.10188 · Cited by 182 · see citing works
Self-citationKadri, N. K., Sahana, G., Charlier, C., Iso‐Touru, T., Guldbrandtsen, B., Karim, L., Nielsen, U., Panitz, F., Aamand, G. P., Schulman, N., et al. (2014) · PLoS Genetics · doi:10.1371/journal.pgen.1004049 · Cited by 179 · see citing works
Self-citationSerial translocation by means of circular intermediates underlies colour sidedness in cattle
Durkin, K., Coppieters, W. R., Drögemüller, C., Ahariz, N., Cambisano, N., Druet, T., Fasquelle, C., Haile, A., Hořín, P., Huang, L., et al. (2012) · Nature · doi:10.1038/nature10757 · Cited by 179 · see citing works
Self-citationski can cause selective growth of skeletal muscle in transgenic mice.Preprint
Sutrave, P., Kelly, A. M., & Hughes, S. H. (1990) · Genes & Development · doi:10.1101/gad.4.9.1462 · Cited by 176 · see citing works
Bolormaa, S., Pryce, J. E., Kemper, K. E., Savin, K. W., Hayes, B. J., Barendse, W., Zhang, Y., Reich, C. M., Mason, B., Bunch, R. J., et al. (2013) · Journal of Animal Science · doi:10.2527/jas.2012-5827 · Cited by 176 · see citing works
Self-citationLive pigs produced from genome edited zygotes
Lillico, S. G., Proudfoot, C., Carlson, D. F., et al. (2013) · Scientific Reports · doi:10.1038/srep02847 · Cited by 175 · see citing works
Genomic selection requires genomic control of inbreeding
Sonesson, A. K., Woolliams, J. A., & Meuwissen, T. H. E. (2012) · Genetics Selection Evolution · doi:10.1186/1297-9686-44-27 · Cited by 173 · see citing works
Highly efficient modification of beta-lactoglobulin (BLG) gene via zinc-finger nucleases in cattle
Yu, S., Luo, J., Song, Z., Ding, F., Dai, Y., & Li, N. (2011) · Cell Research · doi:10.1038/cr.2011.153 · Cited by 169 · see citing works
Berg, F., Gustafson, U., & Andersson, L. (2006) · PLoS Genetics · doi:10.1371/journal.pgen.0020129 · Cited by 169 · see citing works
Jenko, J., Gorjanc, G., Cleveland, M. A., Varshney, R. K., Whitelaw, B., Woolliams, J. A., & Hickey, J. M. (2015) · Genetics Selection Evolution · doi:10.1186/s12711-015-0135-3 · Cited by 163 · see citing works
Gene targeting, genome editing: from Dolly to editors
Tan, W. S., Proudfoot, C., Lillico, S. G., & Whitelaw, B. (2016) · Transgenic Research · doi:10.1007/s11248-016-9932-x · Cited by 163 · see citing works
Littlejohn, M. D., Tiplady, K., Fink, T., Lehnert, K., Lopdell, T., Johnson, T., Couldrey, C., Keehan, M., Sherlock, R. G., Harland, C., et al. (2016) · Scientific Reports · doi:10.1038/srep25376 · Cited by 158 · see citing works
Bovine Polledness – An Autosomal Dominant Trait with Allelic Heterogeneity
Međugorac, I., Seichter, D., Graf, A., Ruß, I., Blum, H., Göpel, K. H., Rothammer, S., Förster, M., & Krebs, S. (2012) · PLoS ONE · doi:10.1371/journal.pone.0039477 · Cited by 152 · see citing works
Functionally reciprocal mutations of the prolactin signalling pathway define hairy and slick cattle
Littlejohn, M. D., Henty, K., Tiplady, K., Johnson, T., Harland, C., Lopdell, T., Sherlock, R. G., Li, W., Lukefahr, S. D., Shanks, B. C., et al. (2014) · Nature Communications · doi:10.1038/ncomms6861 · Cited by 151 · see citing works
Maga, E. A., Shoemaker, C. F., Rowe, J. D., et al. (2006) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(06)72114-2 · Cited by 148 · see citing works
Functional expression of a Δ12 fatty acid desaturase gene from spinach in transgenic pigs
Saeki, K., Matsumoto, K., Kinoshita, M., Suzuki, I., Tasaka, Y., Kano, K., Taguchi, Y., Mikami, K., Hirabayashi, M., Kashiwazaki, N., et al. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0308111101 · Cited by 147 · see citing works
Evolution of the Modern Broiler and Feed Efficiency
Siegel, P. B. (2013) · Annual Review of Animal Biosciences · doi:10.1146/annurev-animal-022513-114132 · Cited by 144 · see citing works
Applied Animal Genomics: Results from the Field
Eenennaam, A. L. V., WEIGEL, K. A., Young, A. E., Cleveland, M. A., & Dekkers, J. C. M. (2013) · Annual Review of Animal Biosciences · doi:10.1146/annurev-animal-022513-114119 · Cited by 140 · see citing works
Suppression of prion protein in livestock by RNA interference
Golding, M. C., Long, C. R., Carmell, M. A., et al. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0600813103 · Cited by 139 · see citing works
Ma, J., Yang, J., Zhou, L., Ren, J., Liu, X., Zhang, H., Yang, B., Zhang, Z., Ma, H., Xie, X., et al. (2014) · PLoS Genetics · doi:10.1371/journal.pgen.1004710 · Cited by 138 · see citing works
Ross, E. M., Moate, P. J., Marett, L. C., Cocks, B., & Hayes, B. J. (2013) · PLoS ONE · doi:10.1371/journal.pone.0073056 · Cited by 138 · see citing works
Self-citationKemper, K. E., Reich, C. M., Bowman, P. J., Jagt, C. J. V., Chamberlain, A. J., Mason, B., Hayes, B. J., & Goddard, M. E. (2015) · Genetics Selection Evolution · doi:10.1186/s12711-014-0074-4 · Cited by 137 · see citing works
Self-citationDunham, R. A., Warr, G. W., Nichols, A., et al. (2002) · Marine Biotechnology · doi:10.1007/s10126-002-0024-y · Cited by 136 · see citing works
How to use molecular marker data to measure evolutionary parameters in wild populations
Garant, D., & Kruuk, L. E. B. (2005) · Molecular Ecology · doi:10.1111/j.1365-294x.2005.02561.x · Cited by 131 · see citing works
Pryce, J. E., Hayes, B. J., & Goddard, M. E. (2011) · Journal of Dairy Science · doi:10.3168/jds.2011-4254 · Cited by 129 · see citing works
Self-citationVeerkamp, R. F., Bouwman, A. C., Schrooten, C., & Calus, M. P. L. (2016) · Genetics Selection Evolution · doi:10.1186/s12711-016-0274-1 · Cited by 127 · see citing works
Estimation of coancestry in Iberian pigs using molecular markers
Toro, M. Á., Barragán, C., Óvilo, C., et al. (2002) · Conservation Genetics · doi:10.1023/a:1019921131171 · Cited by 126 · see citing works
Quantifying Missing Heritability at Known GWAS Loci
Gusev, A., Bhatia, G., Zaitlen, N., Vilhjálmsson, B. J., Diogo, D., Stahl, E. A., Gregersen, P. K., Worthington, J., Klareskog, L., Raychaudhuri, S., et al. (2013) · PLoS Genetics · doi:10.1371/journal.pgen.1003993 · Cited by 123 · see citing works
Evidence for pleiotropism and recent selection in the PLAG 1 region in A ustralian B eef cattle
Fortes, M. R. S., Kemper, K. E., Sasazaki, S., Reverter, A., Pryce, J. E., Barendse, W., Bunch, R. J., McCulloch, R., Harrison, B. E., Bolormaa, S., et al. (2013) · Animal Genetics · doi:10.1111/age.12075 · Cited by 122 · see citing works
Capper, J. L., & Bauman, D. E. (2013) · Annual Review of Animal Biosciences · doi:10.1146/annurev-animal-031412-103727 · Cited by 121 · see citing works
Variants in the SP110 gene are associated with genetic susceptibility to tuberculosis in West Africa
Tosh, K., Campbell, S. J., Fielding, K., et al. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0603340103 · Cited by 119 · see citing works
Dong, Y., Zhang, X., Xie, M., Arefnezhad, B., Wang, Z., Wang, W., Feng, S., Huang, G., Guan, R., Shen, W., et al. (2015) · BMC Genomics · doi:10.1186/s12864-015-1606-1 · Cited by 116 · see citing works
A single-step genomic model with direct estimation of marker effects
Liu, Z., Goddard, M. E., Reinhardt, F., & Reents, R. (2014) · Journal of Dairy Science · doi:10.3168/jds.2014-7924 · Cited by 114 · see citing works
Novel Insights into the Bovine Polled Phenotype and Horn Ontogenesis in Bovidae
Allais‐Bonnet, A., Grohs, C., Međugorac, I., Krebs, S., Djari, A., Graf, A., Fritz, S., Seichter, D., Baur, A., Ruß, I., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0063512 · Cited by 114 · see citing works
Rupp, R., Senin, P., Sarry, J., Allain, C., Tasca, C., Ligat, L., Portes, D., Woloszyn, F., Bouchez, O., Tabouret, G., et al. (2015) · PLoS Genetics · doi:10.1371/journal.pgen.1005629 · Cited by 113 · see citing works
Liu, X., Wang, Y., Guo, W., Chang, B., Liu, J., Guo, Z., Quan, F., & Zhang, Y. (2013) · Nature Communications · doi:10.1038/ncomms3565 · Cited by 109 · see citing works
Mammalian interspecies substitution of immune modulatory alleles by genome editing
Lillico, S. G., Proudfoot, C., King, T., Tan, W. S., Zhang, L., Mardjuki, R. E., Paschon, D. E., Rebar, E. J., Urnov, F. D., Mileham, A. J., et al. (2016) · Scientific Reports · doi:10.1038/srep21645 · Cited by 108 · see citing works
Charlier, C., Li, W., Harland, C., Littlejohn, M. D., Coppieters, W. R., Creagh, F., Davis, S., Druet, T., Faux, P., Guillaume, F., et al. (2016) · Genome Research · doi:10.1101/gr.207076.116 · Cited by 107 · see citing works
Self-citationIncorporation of causative quantitative trait nucleotides in single-step GBLUP
Fragomeni, B. D. O., Lourenco, D. A. L., Masuda, Y., Legarra, A., & Misztal, I. (2017) · Genetics Selection Evolution · doi:10.1186/s12711-017-0335-0 · Cited by 105 · see citing works
Efficient Generation of Myostatin (MSTN) Biallelic Mutations in Cattle Using Zinc Finger Nucleases
Luo, J., Song, Z., Yu, S., Cui, D., Wang, B., Ding, F., Song, L., Dai, Y., & Li, N. (2014) · PLoS ONE · doi:10.1371/journal.pone.0095225 · Cited by 104 · see citing works
Production of cloned transgenic cow expressing omega-3 fatty acids
Wu, X., Ouyang, H., Biao, D., et al. (2011) · Transgenic Research · doi:10.1007/s11248-011-9554-2 · Cited by 104 · see citing works
Liu, X., Wang, Y., Tian, Y., Yu, Y., Gao, M., Hu, G., Su, F., Pan, S., Luo, Y., Guo, Z., et al. (2014) · Proceedings of the Royal Society B Biological Sciences · doi:10.1098/rspb.2013.3368 · Cited by 104 · see citing works
Sonstegard, T. S., Cole, J. B., VanRaden, P. M., Tassell, C. P. V., Null, D. J., Schroeder, S., Bickhart, D. M., & McClure, M. C. (2013) · PLoS ONE · doi:10.1371/journal.pone.0054872 · Cited by 103 · see citing works
Short communication: Genomic selection using a multi-breed, across-country reference population
Pryce, J. E., Gredler, B., Bolormaa, S., Bowman, P. J., Egger-Danner, C., Fuerst, C., Emmerling, R., Sölkner, J., Goddard, M. E., & Hayes, B. J. (2011) · Journal of Dairy Science · doi:10.3168/jds.2010-3719 · Cited by 102 · see citing works
Self-citationAdams, H. A., Sonstegard, T. S., VanRaden, P. M., et al. (2016) · Journal of Dairy Science · doi:10.3168/jds.2015-10517 · Cited by 102 · see citing works
Response and inbreeding from a genomic selection experiment in layer chickens
Wolc, A., Zhao, H., Arango, J. A., et al. (2015) · Genetics Selection Evolution · doi:10.1186/s12711-015-0133-5 · Cited by 101 · see citing works
Jabed, A., Wagner, S., McCracken, J., et al. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1210057109 · Cited by 100 · see citing works
TRANSGENIC ANIMALS IN AGRICULTURE
Murray, J. D. (2012) · Reproduction Fertility and Development · doi:10.1071/rdv25n1ab343 · Cited by 98 · see citing works
Improved Wool Production in Transgenic Sheep Expressing Insulin-like Growth Factor 1
Damak, S., Su, H.-Y., Jay, N. P., et al. (1996) · Nature Biotechnology · doi:10.1038/nbt0296-185 · Cited by 98 · see citing works
McClure, M. C., Bickhart, D. M., Null, D. J., et al. (2014) · PLoS ONE · doi:10.1371/journal.pone.0092769 · Cited by 96 · see citing works
Pausch, H., Schwarzenbacher, H., Burgstaller, J., Flisikowski, K., Wurmser, C., Jansen, S., Jung, S., Schnieke, A., Wittek, T., & Fries, R. (2015) · BMC Genomics · doi:10.1186/s12864-015-1483-7 · Cited by 95 · see citing works
Fasquelle, C., Sartelet, A., Li, W., et al. (2009) · PLoS Genetics · doi:10.1371/journal.pgen.1000666 · Cited by 95 · see citing works
Laible, G., Wei, J., & Wagner, S. (2014) · Biotechnology Journal · doi:10.1002/biot.201400193 · Cited by 94 · see citing works
Kadri, N. K., Harland, C., Faux, P., Cambisano, N., Karim, L., Coppieters, W. R., Fritz, S., Mullaart, E., Baurain, D., Boichard, D., et al. (2016) · Genome Research · doi:10.1101/gr.204214.116 · Cited by 93 · see citing works
Self-citationPausch, H., Emmerling, R., Gredler, B., Fries, R., Daetwyler, H. D., & Goddard, M. E. (2017) · BMC Genomics · doi:10.1186/s12864-017-4263-8 · Cited by 93 · see citing works
Littlejohn, M. D., Grala, T., Sanders, K., Walker, C. G., Waghorn, G. C., Macdonald, K. A., Coppieters, W. R., Georges, M., Spelman, R. J., Hillerton, E., et al. (2011) · Animal Genetics · doi:10.1111/j.1365-2052.2011.02293.x · Cited by 91 · see citing works
Self-citationHot Topic: Using a Stearoyl-CoA Desaturase Transgene to Alter Milk Fatty Acid Composition
Reh, W. A., Maga, E. A., Collette, N. M., et al. (2004) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(04)73486-4 · Cited by 90 · see citing works
Fang, L., Sahana, G., Ma, P., Su, G., Yu, Y., Zhang, S., Lund, M. S., & Sørensen, P. B. (2017) · BMC Genomics · doi:10.1186/s12864-017-4004-z · Cited by 87 · see citing works
One-step generation of myostatin gene knockout sheep via the CRISPR/Cas9 system
Hongbing HAN, Y. M. (2014) · Frontiers of Agricultural Science and Engineering · doi:10.15302/j-fase-2014007 · Cited by 86 · see citing works
Mating programs including genomic relationships and dominance effects
Sun, C., VanRaden, P. M., O’Connell, J. R., WEIGEL, K. A., & Daniel Gianola, B. (2013) · Journal of Dairy Science · doi:10.3168/jds.2013-6969 · Cited by 86 · see citing works
Leveraging genetically simple traits to identify small-effect variants for complex phenotypes
Kemper, K. E., Littlejohn, M. D., Lopdell, T., Hayes, B. J., Bennett, L. E., Williams, R. P. W., Xu, X., Visscher, P. M., Carrick, M., & Goddard, M. E. (2016) · BMC Genomics · doi:10.1186/s12864-016-3175-3 · Cited by 84 · see citing works
Self-citationHealthy goats naturally devoid of prion protein
Benestad, S. L., Austbø, L., Tranulis, M. A., Espenes, A., & Olsaker, I. (2012) · Veterinary Research · doi:10.1186/1297-9716-43-87 · Cited by 83 · see citing works
Bourneuf, E., Otz, P., Pausch, H., Jagannathan, V., Michot, P., Grohs, C., Piton, G., Ammermüller, S., Deloche, M.-C., Fritz, S., et al. (2017) · Scientific Reports · doi:10.1038/s41598-017-11523-3 · Cited by 82 · see citing works
Self-citationMüller, M. M., Brenig, B., Winnacker, E., et al. (1992) · Gene · doi:10.1016/0378-1119(92)90130-h · Cited by 81 · see citing works
Detailed phenotyping identifies genes with pleiotropic effects on body composition
Bolormaa, S., Hayes, B. J., van der Werf, J. H. J., Pethick, D. W., Goddard, M. E., & Daetwyler, H. D. (2016) · BMC Genomics · doi:10.1186/s12864-016-2538-0 · Cited by 80 · see citing works
Self-citationCui, C., Song, Y., Liu, J., Ge, H., Li, Q., Huang, H. M., Hu, L., Zhu, H., Jin, Y., & Zhang, Y. (2015) · Scientific Reports · doi:10.1038/srep10482 · Cited by 79 · see citing works
Genetic modification of food animals
Eenennaam, A. L. V. (2016) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2016.10.007 · Cited by 79 · see citing works
Brito, L. F., Clarke, S., McEwan, J. C., Miller, S. P., Pickering, N., Bain, W. E., Dodds, K. G., Sargolzaei, M., & Schenkel, F. S. (2017) · BMC Genetics · doi:10.1186/s12863-017-0476-8 · Cited by 78 · see citing works
Production of transgenic sheep with growth‐regulating genes
Rexroad, C. E., Hammer, R. E., Bolt, D. J., et al. (1989) · Molecular Reproduction and Development · doi:10.1002/mrd.1080010304 · Cited by 77 · see citing works
Molecular advances in QTL discovery and application in pig breeding
Ernst, C. W., & Steibel, J. P. (2013) · Trends in Genetics · doi:10.1016/j.tig.2013.02.002 · Cited by 77 · see citing works
Fernando, R. L., Cheng, H., Golden, B. L., & Garrick, D. J. (2016) · Genetics Selection Evolution · doi:10.1186/s12711-016-0273-2 · Cited by 76 · see citing works
Jost, B., Vilotte, J., Duluc, I., et al. (1999) · Nature Biotechnology · doi:10.1038/6158 · Cited by 75 · see citing works
Development of Transgenic Sheep That Express the Visna Virus Envelope Gene
Clements, J. E., Wall, R. J., Narayan, O., et al. (1994) · Virology · doi:10.1006/viro.1994.1201 · Cited by 75 · see citing works
Frequency of mosaicism points towards mutation-prone early cleavage cell divisions in cattlePreprint
Harland, C., Charlier, C., Karim, L., Cambisano, N., Deckers, M., Mni, M., Mullaart, E., Coppieters, W., & Georges, M. (2016) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/079863 · Cited by 72 · see citing works
Self-citation
Flagged first, then by citations
Research works printed but not linked: 2
- Georges, M. et al. in Epigenetics and Complex Traits (eds Naoumova, A. K. & Greenwood, C. M. T.) 89–106 (Springer, New York, NY, 2013). This paper reviews the current molecular understanding of the unique phenomenon of polar overdominance at the ovine callipyge locus
- Wang, M., Pryce, J. E., Savin, K. & Hayes, B. J. Prediction of residual feed intake from genome & metagenome profiles in first lactation Holstein-Friesian dairy cattle. Proc. Assoc. Adv. Breed. Genet. 21, 89–92 (2015)
Cited by
Sorted by citations
Brito, L. F., Oliveira, H. R., Houlahan, K., Fonseca, P. A. S., Lam, S., Butty, A. M., Seymour, D. J., Vargas, G., Chud, T. C. S., Silva, F. F., et al. (2020) · Canadian Journal of Animal Science · doi:10.1139/cjas-2019-0193 · Cited by 53 · see citing works
Naval-Sánchez, M., Porto-Neto, L. R., Cardoso, D. F., Hayes, B. J., Daetwyler, H. D., Kijas, J., & Reverter, A. (2020) · Genetics Selection Evolution · doi:10.1186/s12711-020-00546-6 · Cited by 43 · see citing works
Self-citationWorku, D., Hussen, J., De Matteis, G., Schusser, B., & Alhussien, M. N. (2023) · Frontiers in Veterinary Science · doi:10.3389/fvets.2023.1151241 · Cited by 43 · see citing works
“As global demand for food products of animal origin is expected to rise by 70% by 2050, this demand must be met in a manner that has a negligible impact on the environment by improving the genetic quality of livestock using cutting-edge technologies and techniques (1).”
BackgroundLok, S., Lau, T. N. H., Trost, B., Tong, A. H. Y., Paton, T., Wintle, R. F., Engstrom, M. D., Gunn, A., & Scherer, S. W. (2024) · Scientific Reports · doi:10.1038/s41598-024-67270-9 · Cited by 4 · see citing works
“…scheme 152–154 for the muskox, we provide exon-level annotation of genes that have contributed to livestock domestication (Supplementary Table S8) and desirable commercial traits such as meat and dairy production, wool quality, prolificity, and heat tolerance 155–159 (Supplementary Table S9).”
Background
- Authors
- Georges, M., Charlier, C., & Hayes, B.
- Affiliations
- University of Liège (BE)
- The University of Queensland (AU)
- Corresponding author
- Georges, Michel
- Venue
- Nature Reviews Genetics
- Published
- 2018-12-04
- Volume
- 20
- Issue
- 3
- Pages
- 135-156
- ISSN
- 1471-0056 (ISSN-L)
- 1471-0064
- OpenAlex
- W2902798405
- Cited by
- 384
- References
- 282
- Citations by year
- 2026: 36 · 2025: 49 · 2024: 52 · 2023: 44 · 2022: 64 · 2021: 71 · 2020: 51 · 2019: 17
- FWCI
- 4.88
- Type
- journal article
- Language
- en
- Open access
- green
- orbi.uliege.be
- Licence
- other-oa
- www.springer.com/tdm (tdm)
- Locations
- Nature Reviews Genetics (publishedVersion)
- PubMed (publishedVersion)
- ORBi (University of Liège) (submittedVersion, other-oa)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and phenotypic traits in livestock
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Animal Genetics and Reproduction
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Mapping and Diversity in Plants and Animals
- Keywords
- genomic selection, livestock improvement, animal breeding, genetic advance, epigenomics, transcriptomics, microbiome, food security, genomic technologies
- MeSH terms
- Animals, Animal Husbandry, Genome, Livestock
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