The DOI matches its Crossref record.
FIDELITY MECHANISMS IN DNA REPLICATION
Abstract
BASE INSERTION SELECTIVITY BY DNA POL YMERASES . The Base 1''lSertion Pathway . Structural Aspects to Base Selection by DNA Polymerases . Polymerase Insertion Errors . Fidelity Assays and Major Conclusions . Error Avoidance in Base Insertion----General Conclusions ..... .
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“The geometries of A⅐T and G⅐C base pairs are remarkably similar to each other but differ from mismatched base pairs (15,19,24,31,32).”
From DNA Replication Fidelity (2004) · cites this paper as [31]
In the citing paper
“This tight fit is consistent with a concept that emerged about 25 years ago (reviewed in Refs.15 and 31) that nucleotide selectivity largely depends on geometric selection for the shape and size of correct Watson-Crick base pairs.”
From DNA Replication Fidelity (2004) · cites this paper as [31]
Citations
Cited by
Sorted by citations
Items 501–600 of 708
Maritan, E., Gallo, M., Šrůtková, D., Jelinkova, A., Benada, O., Kofroňová, O., Silva-Soares, N. F., Hudcovic, T., Gifford, I., Barrick, J. E., et al. (2022) · BMC Biology · doi:10.1186/s12915-022-01477-y · Cited by 12
“These genes are involved in the DNA mismatch repair system and DNA replication accuracy (Echols and Goodman, 1991; Fukui, 2010; Tompkins et al., 2003).”
BackgroundSzekely, O., Rangadurai, A., Gu, S., Manghrani, A., Guseva, S., & Al‐Hashimi, H. M. (2024) · Nucleic Acids Research · doi:10.1093/nar/gkae027 · Cited by 13
Nakamura, A., Wang, D., & Komatsu, Y. (2018) · RNA · doi:10.1261/rna.067330.118 · Cited by 10
“In the case of canonical DNA/RNA polymerases, WC base-pairing is selected for and mismatched bases are strongly discriminated against (Echols and Goodman 1991; Thomas et al. 1998).”
Iterated function systems for DNA replication
Gaspard, P. (2017) · Physical review. E · doi:10.1103/physreve.96.042403 · Cited by 11
The RuvAB and RecG Proteins of Escherichia coli
Whitby, M. C., Sharples, G. J., & Lloyd, R. G. (1995) · Nucleic acids and molecular biology · doi:10.1007/978-3-642-79488-9_4 · Cited by 11
Valentine, M. R. (2001) · Nucleic Acids Research · doi:10.1093/nar/29.5.1191 · Cited by 11
“Echols and Goodman have also formulated a principle of geometric selection, dictated by base pair geometry, to explain the observed order of insertion frequencies by polymerases (32,33).”
BackgroundNohmi, T., Yamada, M., Matsui, M., et al. (1995) · Molecular and General Genetics MGG · doi:10.1007/bf00425816 · Cited by 11
The Fidelity of Annealing-Ligation: A Theoretical Analysis
Rose, J. A., & Deaton, R. (2000) · International Workshop on DNA-Based Computers · doi:10.1007/3-540-44992-2_16 · Cited by 18
“The fidelity and efficiency of many of the biotechniques which are critical to DNA computation, such as solid phase synthesis [8], DNA ligation [6,7], and DNA polymerization [9], have already been subjected to individual scrutiny.”
BackgroundNierhaus, K. H., Spahn, C. M. T., Burkhardt, N., Dabrowski, M., Diedrich, G., Einfeldt, E., Kamp, D., Marquez, V., Patzke, S., Schäfer, M. A., et al. (2014) · ASM Press eBooks · doi:10.1128/9781555818142.ch26 · Cited by 11
Xia, S., Eom, S. H., Konigsberg, W. H., & Wang, J. (2012) · Biochemistry · doi:10.1021/bi2016487 · Cited by 10
DNA Polymerase Fidelity: Misinsertions and Mismatched Extensions
Goodman, M. F. (1995) · Elsevier eBooks · doi:10.1016/b978-012372182-2/50004-6 · Cited by 11
Self-citationFowler, R. G., Amutan, M., & Isbell, R. J. (1992) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/0027-5107(92)90015-t · Cited by 10
Mitra, R., Pettit, B. M., Rame`, G. L., et al. (1993) · Nucleic Acids Research · doi:10.1093/nar/21.25.6028 · Cited by 10
Trzemecka, A., Jacewicz, A., Carver, G. T., Drake, J. W., & Bębenek, A. (2010) · Journal of Molecular Biology · doi:10.1016/j.jmb.2010.09.058 · Cited by 10
Mamun, A. A. M. A., Yadava, R. S., Ren, L., et al. (2000) · Molecular Microbiology · doi:10.1046/j.1365-2958.2000.02136.x · Cited by 10
“Replication error rates in autonomous organisms are normally kept low through a combination of replicative, as well as pre- and post-replicative, error avoidance mechanisms (Loeb and Kunkel, 1982; Echols and Goodman, 1991; Mo and Schaaper, 1996).”
BackgroundThe role of mutagenic metal ions in mediating in vitro mispairing by alkylpyrimidines.
Bhanot, O. S., & Solomon, J. J. (1994) · Environmental Health Perspectives · doi:10.1289/ehp.94102s381 · Cited by 10
β*, a UV-inducible Shorter Form of the β Subunit of DNA Polymerase III of Escherichia coli
Skaliter, R., Bergstein, M., & Livneh, Z. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.5.2491 · Cited by 10
Theoretical Prediction of the p53 Gene Mutagenic Mechanism Induced bytrans-4-Hydroxy-2-nonenal
Xing, D.-X., Sun, L., Cukier, R. I., & Bu, Y. (2007) · The Journal of Physical Chemistry B · doi:10.1021/jp0673922 · Cited by 10
Induction of theEscherichia coli UVM response by oxidative stress
Wang, G., & Humayun, M. Z. (1996) · Molecular and General Genetics MGG · doi:10.1007/bf02173647 · Cited by 10
Taguchi, T., & Ohashi, M. (1996) · Mechanisms of Ageing and Development · doi:10.1016/s0047-6374(96)01816-7 · Cited by 10
Li, X., Hu, H., Wang, H., Liu, J., Jiang, W., Zhou, F., & Zhang, J. (2024) · Materials Horizons · doi:10.1039/d4mh01158a · Cited by 12
Zhao, L., Xu, Y., Yang, Z., Liu, W., Zhong, S., Bai, J., & Guo, X. (2024) · Advanced Science · doi:10.1002/advs.202408112 · Cited by 9
Human DNA Polymerase ν Catalyzes Correct and Incorrect DNA Synthesis with High Catalytic Efficiency
Gowda, A. S. P., Moldovan, G., & Spratt, T. E. (2015) · Journal of Biological Chemistry · doi:10.1074/jbc.m115.653287 · Cited by 9
“A current hypothesis is that polymerases amplify the differences in energy and structure of correct versus mispairs to both enhance the rate of correct base pair formation and decrease the rate of mispair formation (51-53).”
BackgroundChoi, J.-S., Dasari, A. K. R., Hu, Z., Benkovic, S. J., & Berdis, A. J. (2015) · Nucleic Acids Research · doi:10.1093/nar/gkv1509 · Cited by 9
“Steady-state rates were obtained from the linear portion of the time course and were fit to Equation (1)”
BackgroundMethodInfluentialThe control of the discrimination between dNTP and rNTP in DNA and RNA polymerase
Yoon, H., & Warshel, A. (2016) · Proteins Structure Function and Bioinformatics · doi:10.1002/prot.25104 · Cited by 9
“[1-15] Another important selective behavior of DNA and RNA polymerases is the discrimination against rNTP and dNTP, respectively.”
Parveen, A., Rai, G. K., Mushtaq, M., et al. (2019) · International Journal of Current Microbiology and Applied Sciences · doi:10.20546/ijcmas.2019.805.028 · Cited by 9
DNA and RNA Folds in Transcription Complex as Evidenced by Iodine-125 Radioprobing
Karamychev, V. N., Panyutin, I. G., Neumann, R. D., & Zhurkin, V. B. (2000) · Journal of Biomolecular Structure and Dynamics · doi:10.1080/07391102.2000.10506616 · Cited by 9
Guerra, C. F., Baerends, E. J., & Bickelhaupt, F. M. (2006) · International Journal of Quantum Chemistry · doi:10.1002/qua.21039 · Cited by 9
Cis and trans mechanisms of DNA repair
Vos, J. H. (1992) · Current Opinion in Cell Biology · doi:10.1016/0955-0674(92)90003-u · Cited by 9
Yan, S. F., Wu, M., Geacintov, N. E., & Broyde, S. B. (2004) · Biochemistry · doi:10.1021/bi0499516 · Cited by 9
Overbaugh, J., Jackson, S., Papenhausen, M., & Rudensey, L. M. (1996) · AIDS Research and Human Retroviruses · doi:10.1089/aid.1996.12.1605 · Cited by 9
“…to the same extent as other base pair mismatches.22 As a result, some polymerases are able to elon-gate past G-T base pairs with some efficiency.22 Previous studies of Taq polymerase fidelity have shown that the relative amounts of MgC^ and dNTP may influence polymerase fidelity, although…”
Hachiman is a genome integrity sensorPreprint
Tuck, O. T., Adler, B. A., Armbruster, E. G., Lahiri, A., Hu, J. J., Zhou, J., Pogliano, J. A., & Doudna, J. (2024) · bioRxiv · doi:10.1101/2024.02.29.582594 · Cited by 10
“Faster replication results in higher error rates 51 , leading to more lesions and stalled replication forks in addition to damage to the phage genome induced by other defense systems 52 .”
BackgroundGrebneva, H. A. (2006) · Environmental and Molecular Mutagenesis · doi:10.1002/em.20256 · Cited by 8
“As a rule, DNA synthesis is a highly accurate process [Echols and Goodman, 1991].”
MethodAhmed, M. M., Shen, C., Anam Qadir, K. H. A. N., et al. (2017) · Hereditas · doi:10.1186/s41065-017-0034-4 · Cited by 8
“org/publicdomain/ze Replication slippage events are majorly responsible for extensive repeat length variations, and mispairing of replication strands is key determinant for base substitution in DNA sequence [3].”
BackgroundPark, C., Lee, J., & Choi, B. (2006) · Photochemistry and Photobiology · doi:10.1562/2006-02-28-ir-820 · Cited by 8
“well as normal DNA replication is the degree to which the base pair geometry of the lesion residues deviates from the geometry of the canonical Watson–Crick base pair (23).”
BackgroundSequence Context Effect on Strand Slippage in Natural DNA Primer–Templates
Chi, L. M., & Lam, S. L. (2012) · The Journal of Physical Chemistry B · doi:10.1021/jp211666k · Cited by 8
HIV Reverse Transcriptase Fidelity, Clade Diversity, and Acquisition of Drug Resistance
Menéndez‐Arias, L. (2013) · Springer eBooks · doi:10.1007/978-1-4614-7291-9_11 · Cited by 8
Models for the Evolution of GC Content in Asexual Fungi Candida albicans and C. dubliniensis
Marsolier‐Kergoat, M. (2013) · Genome Biology and Evolution · doi:10.1093/gbe/evt170 · Cited by 7
“Y g. Noting that the magnitude of S and V , which correspond to discrimination coefficients against incorrect nucleotides , is less than 10 À4 (Echols and Goodman 1991), and assuming that the value of in eukaryotic cells usually lies in the range of 30–100 that can be estimated from data on human…”
Hong, Y.-B., Choi, Y., & Jung, G. (2004) · BMB Reports · doi:10.5483/bmbrep.2004.37.2.167 · Cited by 8
“The frequencies of errors during DNA replication in prokaryotic and eukaryotic cells are between 10−9 and 10−10 substitutions per base pair (Echols and Goodman, 1991).”
BackgroundAkua, T., Rahav, G., Saragani, Y., et al. (2016) · AIDS · doi:10.1097/qad.0000000000001339 · Cited by 8
On the coevolution of genes and genetic code
Goodarzi, H., Najafabadi, H. S., & Torabi, N. (2005) · Gene · doi:10.1016/j.gene.2005.08.005 · Cited by 7
Zhang, X., & Gottlieb, P. A. (1995) · Nucleic Acids Research · doi:10.1093/nar/23.9.1502 · Cited by 8
Sedliakova, M., Slezáriková, V., Mašek, F., et al. (2001) · Journal of Photochemistry and Photobiology B Biology · doi:10.1016/s1011-1344(01)00256-1 · Cited by 8
Role of mismatch repair in the Escherichia coli UVM response
Murphy, H. S., Palejwala, V. A., Rahman, M. S., Dunman, P. M., Wang, G., & Humayun, M. Z. (1996) · Journal of Bacteriology · doi:10.1128/jb.178.23.6651-6657.1996 · Cited by 8
“It is widely accepted that induced SOS proteins are required for facilitating translesion synthesis at blocks to replication created by DNA damage (7, 9, 32) and that this translesion synthesis is accomplished by lowering the fidelity of DNA replication, accounting for so-called SOS mutagenesis.”
BackgroundCramer, J., Gopinath, R., Marx, A., & Restle, T. (2008) · ChemBioChem · doi:10.1002/cbic.200700634 · Cited by 8
[23] Rationale for mutagenesis of DNA polymerase active sites: DNA polymerase α
Copeland, W. C., Dong, Q., & Wang, T. S. ‐. (1995) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/0076-6879(95)62025-7 · Cited by 8
Roles of DNA polymerase epsilon and TopBP1 in DNA replication and damage response
Hillukkala, T. (2006) · Cited by 8
Strukturen von DNA‐Polymerasen mit 4′‐alkylierten Nucleotiden im aktiven Zentrum
Betz, K., Streckenbach, F., Schnur, A., Exner, T. E., Welte, W., Diederichs, K., & Marx, A. (2010) · Angewandte Chemie · doi:10.1002/ange.200905724 · Cited by 7
Rivera, I. V., Wang, E. X., & Murphy, K. C. (2024) · Nucleic Acids Research · doi:10.1093/nar/gkae895 · Cited by 7
Markovitch, O., Wu, J., & Otto, S. (2024) · Angewandte Chemie International Edition · doi:10.1002/anie.202317997 · Cited by 8
Xia, S., Beckman, J. W., Wang, J., & Konigsberg, W. H. (2012) · Biochemistry · doi:10.1021/bi300241m · Cited by 7
Evolution of Catabolic Pathways in Pseudomonas Through Gene Transfer
van der Meer, J. R. (2006) · Springer eBooks · doi:10.1007/0-387-28881-3_7 · Cited by 8
Information management in DNA replication modeled by directional, stochastic chains with memory
Arias-Gonzalez, J. R. (2016) · The Journal of Chemical Physics · doi:10.1063/1.4967335 · Cited by 9
Relating DNA base-pairing in aqueous media to DNA polymerase fidelity
Petruska, J. A., & Goodman, M. F. (2017) · Nature Reviews Chemistry · doi:10.1038/s41570-017-0074 · Cited by 7
Self-citationBálint, É., & Unk, I. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21218248 · Cited by 7
Specific disruption of samAB genes in a 60-megadalton cryptic plasmid of Salmonella typhimurium
Nohmi, T., Yamada, M., Matsui, K., et al. (1995) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/0027-5107(95)00027-g · Cited by 7
Grúz, P., Matsui, K., Sofuni, T., et al. (1998) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/s0027-5107(97)00237-6 · Cited by 7
A non-excision uvr-dependent DNA repair pathway of Escherichia coli (involvement of stress proteins)
Sedliakova, M. (1998) · Journal of Photochemistry and Photobiology B Biology · doi:10.1016/s1011-1344(98)00159-6 · Cited by 7
Zeng, H., Mondal, M., Song, R., Zhang, J., Xia, B., Liu, M., Zhu, C., He, B., Gao, Y. Q., & Yi, C. (2019) · PubMed · doi:10.1002/anie.201807845 · Cited by 6
Zhu, Y., Stroud, J., Song, L., & Parris, D. S. (2010) · Journal of Nucleic Acids · doi:10.4061/2010/631595 · Cited by 6
“We discuss how the results of presteady-state and steady-state kinetic analysis of the polymerizing and excision activities of herpes simplex virus type 1 (HSV-1) DNA polymerase have led to a better understanding of the mechanisms controlling fidelity of this important model replication polymerase.”
BackgroundShort-patch reverse transcription in Escherichia coli.
Thaler, D. S., Tombline, G., & Zahn, K. (1995) · Genetics · doi:10.1093/genetics/140.3.909 · Cited by 6
“The error rate of transcription is reported to be 10-2-10-5 per base (BLANK et al. 1986; LIBBY and GALLANT 1994), much higher than for normal DNA replication (ECHOLS and GOODMAN 1991).”
BackgroundA DNA-centered explanation of the DNA polymerase translocation mechanism
Arias‐Gonzalez, J. R. (2017) · Scientific Reports · doi:10.1038/s41598-017-08038-2 · Cited by 6
Smoking gun for a rare mutation mechanism
Goodman, M. F. (2018) · Nature · doi:10.1038/d41586-018-00418-6 · Cited by 6
Self-citationSu, K., Goodman, S. D., Lai, H.-M., et al. (2018) · Journal of Visualized Experiments · doi:10.3791/57862 · Cited by 6
Cox, M. M. (2014) · ASM Press eBooks · doi:10.1128/9781555817640.ch20 · Cited by 6
Schaaper, R. M., & Dunn, R. L. (1998) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/s0027-5107(97)00278-9 · Cited by 6
Gestl, E. E., & Eckert, K. A. (2005) · Biochemistry · doi:10.1021/bi047591g · Cited by 6
The ssb‐113 allele suppresses the dnaQ49 mutator and alters DNA supercoiling in Escherichia coli
Quiñones, A., & Neumann, S. (1997) · Molecular Microbiology · doi:10.1046/j.1365-2958.1997.4531718.x · Cited by 6
“, 1995), it can be concluded that the intracellular level of e-subunit is a very important factor that influences spontaneous mutagenesis (Echols, 1982; Horiuchi et al., 1989; Echols and Goodman, 1991).”
BackgroundSNP-SNP Interactions between dNTP Supply Enzymes and Mismatch DNA Repair in Breast Cancer
Feng, I., & Radivoyevitch, T. (2009) · doi:10.1109/occbio.2009.25 · Cited by 6
“Genetic defects and drug treatments have been shown to result in fluctuations of the concentrations of dNTPs and as a result, increased replication error rates [7],[8].”
BackgroundProkaryotic Genome-Wide Comparisons and Evolutionary Implications
Karlin, S., & Mrázek, J. (1998) · Springer eBooks · doi:10.1007/978-1-4615-6369-3_19 · Cited by 6
Evolution of Metabolic Pathways for Degradation of Environmental Pollutants
van der Meer, J. R. (2003) · Wiley eBooks · doi:10.1002/0471263397.env011 · Cited by 6
Yang, Y., Kang, X., Kohalmi, L., Karthikeyan, R., & Kunz, B. A. (1999) · Current Genetics · doi:10.1007/s002940050445 · Cited by 6
“First, selectivity of base insertion by DNA polymerases ensures that most often the correct nucleotide is placed opposite a template base resulting in the preferred Watson-Crick base pair ( Echols and Goodman 1991; Kunkel 1992).”
BackgroundSelektivität der DNA-Replikation: Basenpaargeometrie wichtiger als Wasserstoffbrücken
Diederichsen, U. (1998) · Angewandte Chemie · doi:10.1002/(sici)1521-3757(19980619)110:12 · Cited by 6
Emergent and Convergent Features in the Laboratory Evolution of Polymerase Ribozymes
Horning, D. P. (2025) · Biochemistry · doi:10.1021/acs.biochem.5c00160 · Cited by 5
Geng, A., Roy, R., Gu, S., Guseva, S., Pratihar, S., Lee, Y., Li, L.-S., Kimsey, I. J., Wilson, M. A., & Al-Hashimi, H. M. (2025) · Journal of Molecular Biology · doi:10.1016/j.jmb.2025.169197 · Cited by 5
Su, K., Lai, H.-M., Goodman, S. D., et al. (2017) · DNA repair · doi:10.1016/j.dnarep.2017.11.011 · Cited by 5
Polymerase-Dependent DNA Synthesis from Phosphoramidate-Activated Nucleotides
Yang, S., & Herdewijn, P. A. (2011) · Nucleosides Nucleotides & Nucleic Acids · doi:10.1080/15257770.2011.598491 · Cited by 5
“[35,36] In this template-dependent elongation, the binding of primer–template to HIV-RT and the base stacking are also involved.[37,38] Along one strand, bases rotate in the same sense with no interference and purines can stack more efficiently than pyrimidines.”
BackgroundNMR-Based Structural Studies of Damaged DNAs
Kung, H. C., Wang, K. Y., Parker, S. A., Goljer, I., & Bolton, P. H. (1996) · Magnetic Resonance in Chemistry · doi:10.1002/(sici)1097-458x(199612)34:13 · Cited by 7
A novel approach to design a reversible shifter circuit using DNA
Ahmed, T., Sarker, A., Sharif, M. I., Rashid, S. M. M., Rahman, M. A., & Babu, H. M. H. (2013) · IEEE International SOC Conference (SOCC) · doi:10.1109/socc.2013.6749697 · Cited by 5
“00 ©2013 IEEE 256 hard drive, data density is about 7 Gbits per square inch [9-12].”
BackgroundEnhanced Taq Variant Enables Efficient Genome Editing Testing and Mutation Detection
Du, P., Li, B., Liu, X., Yang, L., Ren, N., Li, Y., & Huang, Q. (2022) · The CRISPR Journal · doi:10.1089/crispr.2021.0105 · Cited by 5
Designing and Optimizing DNA Reversible Adders and Adder/Subtractors
Khoshkhahesh, A., Ebrahimi, S., & Sabbaghi‐Nadooshan, R. (2017) · BioNanoScience · doi:10.1007/s12668-017-0434-y · Cited by 5
“– Complementary base pairs can provide a unique mechanism to error correction [8, 9].”
BackgroundHuber, C., & Marx, A. (2017) · PLoS ONE · doi:10.1371/journal.pone.0183623 · Cited by 5
“Additionally, fidelity is further determined by the ability of a DNA polymerase to discriminate between the extension of the nascent DNA strand from canonical and mismatched primer ends [2, 4, 20, 21].”
BackgroundDNA Polymerases That Perform Template-Independent DNA Synthesis
Berdis, A. J. (2013) · Nucleic acids and molecular biology · doi:10.1007/978-3-642-39796-7_5 · Cited by 5
“The existence of these conformational changes has been demonstrated using various kinetic, structural, and spectroscopic techniques (Echols and Goodman 1991; Kiefer et al. 1998; Hogg et al. 2004; Bloom et al. 1993; Hariharan and Reha-Krantz 2005; Johnson 1993; Dunlap and Tsai 2002).”
BackgroundSlezáriková, V., Mašek, F., Fridrichová, I., et al. (1996) · Mutation Research/DNA Repair · doi:10.1016/0921-8777(95)00033-x · Cited by 5
Ogata, N. (2007) · Biochimie · doi:10.1016/j.biochi.2006.12.011 · Cited by 5
Wang, G., Dunman, P. M., & Humayun, M. Z. (1997) · Cell Research · doi:10.1038/cr.1997.1 · Cited by 5
“Three SOS inducible proteins, namely, RecA, UmuD' and UmuC are believed to facilitate translesion DNA synthesis by a mechanism that is not understood[4, 5].”
The Tricks of Ribosomal Elongation Factors
Nierhaus, K. H. (1996) · Angewandte Chemie International Edition in English · doi:10.1002/anie.199621981 · Cited by 5
Streckenbach, F., Gopinath, R., Möller, H. M., & Marx, A. (2009) · ChemBioChem · doi:10.1002/cbic.200900123 · Cited by 5
Ye, A. J., Haynes, W. J., & Romero, D. P. (1999) · Molecular and Cellular Biology · doi:10.1128/mcb.19.4.2887 · Cited by 5
Sokhandan-Bashir, N., Hooshmand, A., & Delpasand-Khabazi, A. (2012) · Indian Journal of Virology · doi:10.1007/s13337-012-0057-4 · Cited by 4
Sun, L., Cukier, R. I., & Bu, Y. (2007) · The Journal of Physical Chemistry B · doi:10.1021/jp063645f · Cited by 4
Ramanathan, S. (2001) · Nucleic Acids Research · doi:10.1093/nar/29.10.2097 · Cited by 4
“Organisms typically tolerate error frequencies of 10–9 to 10–10 per base replicated during the duplication of the genome (45).”
BackgroundEffect of Different Divalent Cations on the Kinetics and Fidelity of DNA Polymerases
Vashishtha, A. K., & Konigsberg, W. H. (2018) · AIMS Biophysics · doi:10.3934/biophy.2018.4.272 · Cited by 4
A Comparative Analysis of Translesion DNA Synthesis Catalyzed by a High-Fidelity DNA Polymerase
Dasari, A. K. R., Deodhar, T. J., & Berdis, A. J. (2017) · Journal of Molecular Biology · doi:10.1016/j.jmb.2017.06.003 · Cited by 4
(2013) · International Journal of Biosciences (IJB) · doi:10.12692/ijb/3.11.205-212 · Cited by 4
Singh, S. B., Li, B., Hingerty, B. E., et al. (1994) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.1994.tb52798.x · Cited by 4
HIV1 reverse transcriptase: an out-of-the-ordinary enzyme
Sala, M., & Vartanian, J. (1998) · Bulletin de l Institut Pasteur · doi:10.1016/s0020-2452(98)80028-6 · Cited by 4
The updated picture of spontaneous mutagenesis could involve DNA bases tautomerism
Cherepenko, E., & Hovorun, D. (2007) · Biopolymers and Cell · doi:10.7124/bc.000762 · Cited by 4
RecA interacts with Klenow and enhances fidelity of DNA synthesis in vitro.
Karthikeyan, G., Lakshmikant, G. S., Wagle, M. D., et al. (1999) · PubMed · Cited by 4
Modified DNA Bases: Probing Base‐Pair Recognition by Polymerases
Kool, E. T. (2008) · Wiley eBooks · doi:10.1002/9783527623112.ch3 · Cited by 4
Metadata
- Authors
- Echols, H., & Goodman, M. F.
- Affiliations
- University of California, Berkeley (US)
- ORCID
- Goodman, Myron F.
- Venue
- Annual Review of Biochemistry
- Publisher
- Annual Reviews
- Published
- 1991-06
- Volume
- 60
- Issue
- 1
- Pages
- 477-511
- ISSN
- 0066-4154 (ISSN-L)
- 1545-4509
- OpenAlex
- W2138476183
- Cited by
- 712
- References
- 0
- Citations by year
- 2026: 3 · 2025: 7 · 2024: 11 · 2023: 4 · 2022: 8 · 2021: 3 · 2020: 7 · 2019: 9 · 2018: 9 · 2017: 15 · 2016: 9 · 2015: 12 · 2014: 16 · 2013: 20 · 2012: 18
- FWCI
- 12.30
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Annual Review of Biochemistry (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Francis Crick Institute
- Vlaamse regering
- National Institutes of Health (5r01ca041655-10, 5r01gm042554-13)
- National Cancer Institute (CA 41655)
- National Institute of General Medical Sciences (GM 42554, GM 21422)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA and Nucleic Acid Chemistry
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
- Keywords
- DNA replication fidelity, DNA polymerase, insertion errors, polymerase structure, error prevention
- MeSH terms
- DNA Damage, DNA-Directed DNA Polymerase, DNA Replication, Escherichia coli, Kinetics, Mutation, SOS Response, Genetics
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review