Error-Prone Repair DNA Polymerases in Prokaryotes and Eukaryotes

Class Switch Recombination and Hypermutation Require Activation-Induced Cytidine Deaminase (AID), a Potential RNA Editing Enzyme

Muramatsu, M., Kinoshita, K., Fagarasan, S., Yamada, S., Shinkai, Y., & Honjo, T. (2000) · Cell · doi:10.1016/s0092-8674(00)00078-7 · Cited by 3,475

Ultraviolet mutagenesis and inducible DNA repair in Escherichia coli

Witkin, E. M. (1976) · Bacteriological Reviews · doi:10.1128/br.40.4.869-907.1976 · Cited by 1,865

Activation-Induced Cytidine Deaminase (AID) Deficiency Causes the Autosomal Recessive Form of the Hyper-IgM Syndrome (HIGM2)

Revy, P., Muto, T., Lévy, Y., Geissmann, F., Plebani, A., Sanal, Ö., Catalan, N., Forveille, M., Dufourcq-Lagelouse, R., Gennery, A. R., et al. (2000) · Cell · doi:10.1016/s0092-8674(00)00079-9 · Cited by 1,645

The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase η

Masutani, C., Kusumoto, R., Yamada, A., Dohmae, N., Yokoi, M., Yuasa, M., Araki, M., Iwai, S., Takio, K., & Hanaoka, F. (1999) · Nature · doi:10.1038/21447 · Cited by 1,292

Biochemistry of homologous recombination in Escherichia coli

Kowalczykowski, S. C., Dixon, D. A., Eggleston, A. K., Lauder, S., & Rehrauer, W. M. (1994) · Microbiological Reviews · doi:10.1128/mr.58.3.401-465.1994 · Cited by 1,255

The importance of repairing stalled replication forks

Cox, M. M., Goodman, M. F., Kreuzer, K. N., Sherratt, D. J., Sandler, S. J., & Marians, K. J. (2000) · Nature · doi:10.1038/35003501 · Cited by 1,044

Hypermutation of multiple proto-oncogenes in B-cell diffuse large-cell lymphomas

Pasqualucci, L., Neumeister, P., Goossens, T., Nanjangud, G., Chaganti, R. S. K., Küppers, R., & Dalla-Favera, R. (2001) · Nature · doi:10.1038/35085588 · Cited by 1,032

DNA Replication Fidelity

Kunkel, T. A., & Bebenek, K. (2000) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.69.1.497 · Cited by 1,003

Recombinational Repair of DNA Damage in Escherichia coli and Bacteriophage λ

Kuzminov, A. (1999) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.63.4.751-813.1999 · Cited by 897

The Y-Family of DNA Polymerases

Ohmori, H., Friedberg, E. C., Fuchs, R. P., Goodman, M. F., Hanaoka, F., Hinkle, D. C., Kunkel, T. A., Lawrence, C. W., Livneh, Z., Nohmi, T., et al. (2001) · Molecular Cell · doi:10.1016/s1097-2765(01)00278-7 · Cited by 882

Components of nucleotide excision repair and DNA damage tolerance in Arabidopsis thaliana

Kunz, B. A., Anderson, H. J., Osmond-McLeod, M. J., & Vonarx, E. J. (2005) · Environmental and Molecular Mutagenesis · doi:10.1002/em.20094 · Cited by 65

DNA Polymerases η and θ Function in the Same Genetic Pathway to Generate Mutations at A/T during Somatic Hypermutation of Ig Genes

Masuda, K., Ouchida, R., Hikida, M., Kurosaki, T., Yokoi, M., Masutani, C., Seki, M., Wood, R. D., Hanaoka, F., & Wang, J. O. (2007) · Journal of Biological Chemistry · doi:10.1074/jbc.m611849200 · Cited by 65

DNA repair in reduced genome: The Mycoplasma model

Carvalho, F. M., da Fonsêca, M. M., de Medeiros, S. R. B., Scortecci, K. C., Blaha, C. A. G., & Agnez‐Lima, L. F. (2005) · Gene · doi:10.1016/j.gene.2005.06.012 · Cited by 64

Mechanisms of mutagenesis: DNA replication in the presence of DNA damage

Liu, B., Xue, Q., Tang, Y., Cao, J., Guengerich, F. P., & Zhang, H. (2016) · Mutation Research/Reviews in Mutation Research · doi:10.1016/j.mrrev.2016.03.006 · Cited by 63

Versatility of Y-family Sulfolobus solfataricus DNA Polymerase Dpo4 in Translesion Synthesis Past Bulky N2-Alkylguanine Adducts

Zhang, H., Eoff, R. L., Kozekov, I. D., Rizzo, C. J., Egli, M., & Guengerich, F. P. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m807778200 · Cited by 63

The Essential C Family DnaE Polymerase Is Error-prone and Efficient at Lesion Bypass

Bruck, I., Goodman, M. F., & O’Donnell, M. E. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m308307200 · Cited by 63

DNA polymerases in adaptive immunity

Weill, J., & Reynaud, C. (2008) · Nature reviews. Immunology · doi:10.1038/nri2281 · Cited by 66

Dpo4 is hindered in extending a G·T mismatch by a reverse wobble

Trincão, J., Johnson, R. E., Wolfle, W. T., Escalante, C. R., Prakash, S., Prakash, L., & Aggarwal, A. K. (2004) · Nature Structural & Molecular Biology · doi:10.1038/nsmb755 · Cited by 63

Characterization of Escherichia coli Translesion Synthesis Polymerases and Their Accessory Factors

Beuning, P. J., Simon, S. M., Godoy, V. G., Jarosz, D. F., & Walker, G. C. (2006) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(06)08020-7 · Cited by 62

Solution X-ray scattering combined with computational modeling reveals multiple conformations of covalently bound ubiquitin on PCNA

Tsutakawa, S. E., Wynsberghe, A. W. V., Freudenthal, B., Weinacht, C. P., Gakhar, L., Washington, M. T., Zhuang, Z., Tainer, J. A., & Ivanov, I. N. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1110480108 · Cited by 62

In Vivo Bypass Efficiencies and Mutational Signatures of the Guanine Oxidation Products 2-Aminoimidazolone and 5-Guanidino-4-nitroimidazole

Neeley, W. L., Delaney, J. C., Henderson, P. T., & Essigmann, J. M. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m407117200 · Cited by 62

CpG dinucleotides and the mutation rate of non-CpG DNAPreprint

Walser, J., Ponger, L., & Furano, A. V. (2008) · Genome Research · doi:10.1101/gr.076455.108 · Cited by 64

Zinc blocks SOS-induced antibiotic resistance via inhibition of RecA in Escherichia coli

Bunnell, B. E., Escobar, J. F., Bair, K. L., Sutton, M. D., & Crane, J. K. (2017) · PLoS ONE · doi:10.1371/journal.pone.0178303 · Cited by 63

Direct estimation of the spontaneous mutation rate by short-term mutation accumulation lines in Chironomus riparius

Waldvogel, A., & Pfenninger, M. (2017) · Evolution Letters · doi:10.1002/evl3.8 · Cited by 61

Checkpoint responses to replication stalling: inducing tolerance and preventing mutagenesis

Kai, M., & Wang, T. S. ‐. (2003) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2003.08.010 · Cited by 61

Simulating the Effect of DNA Polymerase Mutations on Transition-State Energetics and Fidelity: Evaluating Amino Acid Group Contribution and Allosteric Coupling for Ionized Residues in Human Pol β

Xiang, Y., Oelschlaeger, P., Florián, J., Goodman, M. F., & Warshel, A. (2006) · Biochemistry · doi:10.1021/bi060147o · Cited by 61

To Slip or Skip, Visualizing Frameshift Mutation Dynamics for Error-prone DNA Polymerases

Tippin, B. L., Kobayashi, S., Bertram, J. G., & Goodman, M. F. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m408600200 · Cited by 61

Xeroderma pigmentosum variant and error-prone DNA polymerases

Kannouche, P. (2003) · Biochimie · doi:10.1016/j.biochi.2003.10.009 · Cited by 60

Role of the DinB Homologs Rv1537 and Rv3056 in Mycobacterium tuberculosis

Kana, B. D., Abrahams, G. L., Sung, N., Warner, D. F., Gordhan, B. G., Machowski, E. E., Tsenova, L., Sacchettini, J. C., Stoker, N. G., Kaplan, G., et al. (2010) · Journal of Bacteriology · doi:10.1128/jb.01135-09 · Cited by 60

Sequence context-dependent replication of DNA templates containing UV-induced lesions by human DNA polymerase ι

Vaisman, A., Frank, E. G., Iwai, S., Ohashi, E., Ohmori, H., Hanaoka, F., & Woodgate, R. (2003) · DNA repair · doi:10.1016/s1568-7864(03)00094-6 · Cited by 59

Error-Prone DNA Polymerase IV Is Regulated by the Heat Shock Chaperone GroE in Escherichia coli

Layton, J. C., & Foster, P. L. (2005) · Journal of Bacteriology · doi:10.1128/jb.187.2.449-457.2005 · Cited by 58

Two distinct modes of RecA action are required for DNA polymerase V-catalyzed translesion synthesis

Pham, P., Seitz, E. M., Saveliev, S., Shen, X., Woodgate, R., Cox, M. M., & Goodman, M. F. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.172197099 · Cited by 58

Replisome Fate upon Encountering a Leading Strand Block and Clearance from DNA by Recombination Proteins

McInerney, P., & O’Donnell, M. E. (2007) · Journal of Biological Chemistry · doi:10.1074/jbc.m703777200 · Cited by 57

Down-regulation of DNA polymerases κ, η, ι, and ζ in human lung, stomach, and colorectal cancers

Pan, Q., Fang, Y., Xu, Y., Zhang, K., & Hu, X. (2004) · Cancer Letters · doi:10.1016/j.canlet.2004.07.021 · Cited by 57

A human DNA polymerase η complex containing Rad18, Rad6 and Rev1; proteomic analysis and targeting of the complex to the chromatin‐bound fraction of cells undergoing replication fork arrest

Yuasa, M., Masutani, C., Hirano, A., Cohn, M. A., Yamaizumi, M., Nakatani, Y., & Hanaoka, F. (2006) · Genes to Cells · doi:10.1111/j.1365-2443.2006.00974.x · Cited by 58

Engineered hypermutation adapts cyanobacterial photosynthesis to combined high light and high temperature stress

Sun, H., Luan, G., Ma, Y., Lou, W., Chen, R., Feng, D., Zhang, S., Sun, J., & Lu, X. (2023) · Nature Communications · doi:10.1038/s41467-023-36964-5 · Cited by 56

Post‐replication repair in DT40 cells: translesion polymerases versus recombinases

Hochegger, H., Sonoda, E., & Takeda, S. (2004) · BioEssays · doi:10.1002/bies.10403 · Cited by 56

Human DNA polymerase‐η, an A‐T mutator in somatic hypermutation of rearranged immunoglobulin genes, is a reverse transcriptase

Franklin, A., Milburn, P. J., Blanden, R. V., & Steele, E. J. (2004) · Immunology and Cell Biology · doi:10.1046/j.0818-9641.2004.01221.x · Cited by 56

Second cancers after radiotherapy: any evidence for radiation-induced genomic instability?

Sigurdson, A. J., & Jones, I. M. (2003) · Oncogene · doi:10.1038/sj.onc.1206989 · Cited by 58

Structure and mechanism of error-free replication past the major benzo[a]pyrene adduct by human DNA polymerase κ

Jha, V., Bian, C., Xing, G., & Ling, H. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkw204 · Cited by 55

N -acetylcysteine blocks SOS induction and mutagenesis produced by fluoroquinolones in Escherichia coli

Rodríguez-Rosado, A. I., Morante, E. Y. V., Rodríguez-Rojas, A., Costas, C., Galhardo, R. S., Rodríguez-Beltrán, J., & Blázquez, J. (2019) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkz210 · Cited by 55

Evolving a Thermostable DNA Polymerase That Amplifies from Highly Damaged Templates

Gloeckner, C., Sauter, K. B. M., & Marx, A. (2007) · Angewandte Chemie International Edition · doi:10.1002/anie.200603987 · Cited by 55

Considering the cancer consequences of altered DNA polymerase function

Kunkel, T. A. (2003) · Cancer Cell · doi:10.1016/s1535-6108(03)00027-8 · Cited by 55

DNA Lesions and Repair in Immunoglobulin Class Switch Recombination and Somatic Hypermutation

Xu, Z., Fülöp, Z. Z., ZHONG, Y., Evinger, A. J., Zan, H., & Casali, P. (2005) · Annals of the New York Academy of Sciences · doi:10.1196/annals.1313.119 · Cited by 55

REV1 and DNA polymerase zeta in DNA interstrand crosslink repair

Sharma, S., & Canman, C. E. (2012) · Environmental and Molecular Mutagenesis · doi:10.1002/em.21736 · Cited by 56

DNA Replication in Mycobacterium tuberculosis

Ditse, Z., Lamers, M. H., & Warner, D. F. (2017) · Microbiology Spectrum · doi:10.1128/microbiolspec.tbtb2-0027-2016 · Cited by 54

Structural basis of transcriptional stalling and bypass of abasic DNA lesion by RNA polymerase II

Wang, W., Walmacq, C., Chong, J. P. C., Kashlev, M., & Wang, D. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1722050115 · Cited by 53

Translesion synthesis of 7,8-dihydro-8-oxo-2′-deoxyguanosine by DNA polymerase eta in vivo

Lee, D.-H., & Pfeifer, G. P. (2008) · Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis · doi:10.1016/j.mrfmmm.2008.02.006 · Cited by 53

Mechanisms of stationary-phase mutagenesis in bacteria: mutational processes in pseudomonads

Kivisaar, M. (2010) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.2010.02027.x · Cited by 52

Ethanol-tolerant Saccharomyces cerevisiae strains isolated under selective conditions by over-expression of a proofreading-deficient DNA polymerase δ

Abe, H., Fujita, Y., Takaoka, Y., Kurita, E., Yano, S., Tanaka, N., & Nakayama, K.-I. (2009) · Journal of Bioscience and Bioengineering · doi:10.1016/j.jbiosc.2009.03.019 · Cited by 51

LC-MS/MS Identification and Yeast Polymerase η Bypass of a Novel γ-Irradiation-Induced Intrastrand Cross-Link Lesion G[8−5]C

Gu, C., & Wang, Y. (2004) · Biochemistry · doi:10.1021/bi0497749 · Cited by 51

Zinc Blockade of SOS Response Inhibits Horizontal Transfer of Antibiotic Resistance Genes in Enteric Bacteria

Crane, J. K., Cheema, M. B., Olyer, M. A., & Sutton, M. D. (2018) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2018.00410 · Cited by 53

Mirror image stereoisomers of the major benzo[a]pyrene N2-dG adduct are bypassed by different lesion-bypass DNA polymerases in E. coli

Seo, K. Y., Nagalingam, A., Miri, S., Yin, J., Chandani, S., Kolbanovskiy, A., Shastry, A., & Loechler, E. L. (2006) · DNA repair · doi:10.1016/j.dnarep.2005.12.009 · Cited by 51

Plastid DNA polymerases from higher plants, Arabidopsis thaliana

Mori, Y., Kimura, S., Saotome, A., Kasai, N., Sakaguchi, N., Uchiyama, Y., Ishibashi, T., Yamamoto, T., Chiku, H., & Sakaguchi, K. (2005) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2005.06.052 · Cited by 51

Involvement of Y-Family DNA Polymerases in Mutagenesis Caused by Oxidized Nucleotides in Escherichia coli

Yamada, M., Nunoshiba, T., Shimizu, M., Grúz, P., Kamiya, H., Harashima, H., & Nohmi, T. (2006) · Journal of Bacteriology · doi:10.1128/jb.00281-06 · Cited by 51

Impact of abasic site orientation within nucleosomes on human APE1 endonuclease activity

Hinz, J. M. (2014) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2014.05.008 · Cited by 50

A DinB variant reveals diverse physiological consequences of incomplete TLS extension by a Y-family DNA polymerase

Jarosz, D. F., Cohen, S., Delaney, J. C., Essigmann, J. M., & Walker, G. C. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0907257106 · Cited by 49

An editing-defective aminoacyl-tRNA synthetase is mutagenic in aging bacteria via the SOS response

Bacher, J. M., & SCHIMMEL, P. R. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0610835104 · Cited by 48

Handling the 3-methylcytosine lesion by six human DNA polymerases members of the B-, X- and Y-families

Furrer, A., & van Loon, B. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt889 · Cited by 48

Physical and chemical stress on Serratia marcescens and studies on prodigiosin pigment production

El-Bialy, H. A., & El-Nour, S. A. A. (2014) · Annals of Microbiology · doi:10.1007/s13213-014-0837-8 · Cited by 48

Environmental tuning of mutation rates

Saint‐Ruf, C., & Matić, I. (2005) · Environmental Microbiology · doi:10.1111/j.1462-2920.2005.00968.x · Cited by 47

Mutagenic Effects of 2-Deoxyribonolactone in Escherichia coli. An Abasic Lesion That Disobeys the A-Rule

Kroeger, K. M., Jiang, Y. L., Kow, Y. W., Goodman, M. F., & Greenberg, M. M. (2004) · Biochemistry · doi:10.1021/bi049813g · Cited by 47

The N-clasp of human DNA polymerase κ promotes blockage or error-free bypass of adenine- or guanine-benzo[a]pyrenyl lesions

Jia, L., Geacintov, N. E., & Broyde, S. B. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkn719 · Cited by 47

Translesion synthesis DNA polymerases and control of genome stability

Polina, V. S. (2006) · Frontiers in bioscience · doi:10.2741/1985 · Cited by 46

Mutator Phenotype Resulting from DNA Polymerase IV Overproduction in Escherichia coli : Preferential Mutagenesis on the Lagging Strand

Kuban, W., Banach‐Orlowska, M., Podsiadła-Białoskórska, M., Lipowska, A., Schaaper, R. M., Jonczyk, P., & Fijałkowska, I. J. (2005) · Journal of Bacteriology · doi:10.1128/jb.187.19.6862-6866.2005 · Cited by 46

Unique genes identified in the epidemic extremely drug-resistant KPC-producing Klebsiella pneumoniae sequence type 258

Chmelnitsky, I., Shklyar, M., Hermesh, O., Navon‐Venezia, S., Edgar, R., & Carmeli, Y. (2012) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dks370 · Cited by 45

Determining the effects of DNA sequence on Hel308 helicase translocation along single-stranded DNA using nanopore tweezers

Craig, J. M., Laszlo, A. H., Nova, I. C., Brinkerhoff, H. D., Noakes, M. T., Baker, K. S., Bowman, J. L., Higinbotham, H. R., Mount, J. W., & Gundlach, J. H. (2019) · Nucleic Acids Research · doi:10.1093/nar/gkz004 · Cited by 45

Expression of human AID in yeast induces mutations in context similar to the context of somatic hypermutation at G-C pairs in immunoglobulin genes

Mayorov, V., Rogozin, I. B., Adkison, L. R., Frahm, C., Kunkel, T. A., & Pavlov, Y. I. (2005) · BMC Immunology · doi:10.1186/1471-2172-6-10 · Cited by 46

RecFOR proteins are essential for Pol V‐mediated translesion synthesis and mutagenesis

藤井, 慎., Isogawa, A., & Fuchs, R. P. (2006) · The EMBO Journal · doi:10.1038/sj.emboj.7601474 · Cited by 45

Arabidopsis thaliana AtPOLK encodes a DinB‐like DNA polymerase that extends mispaired primer termini and is highly expressed in a variety of tissues

García‐Ortiz, M. V., Ariza, R. R., Hoffman, P. D., Hays, J. B., & Roldán‐Arjona, T. (2004) · The Plant Journal · doi:10.1111/j.1365-313x.2004.02112.x · Cited by 45

Two processivity clamp interactions differentially alter the dual activities of UmuC

Beuning, P. J., Sawicka, D., Barsky, D., & Walker, G. C. (2005) · Molecular Microbiology · doi:10.1111/j.1365-2958.2005.04959.x · Cited by 45

Competitive Fitness During Feast and Famine: How SOS DNA Polymerases Influence Physiology and Evolution in Escherichia coli

Corzett, C. H., Goodman, M. F., & Finkel, S. E. (2013) · Genetics · doi:10.1534/genetics.113.151837 · Cited by 44

Structural insights into the assembly of human translesion polymerase complexes

Xie, W., Yang, X., Xu, M., & Jiang, T. (2012) · Protein & Cell · doi:10.1007/s13238-012-2102-x · Cited by 45

A DNA Polymerase V Homologue Encoded by TOL Plasmid pWW0 Confers Evolutionary Fitness on Pseudomonas putida under Conditions of Environmental Stress

Tark‐Dame, M., Tover, A., Tarassova, K., Tegova, R., Kivi, G., Hõrak, R., & Kivisaar, M. (2005) · Journal of Bacteriology · doi:10.1128/jb.187.15.5203-5213.2005 · Cited by 45

Polyphosphate kinase regulates error‐prone replication by DNA polymerase IV in Escherichia coli

Stumpf, J. D., & Foster, P. L. (2005) · Molecular Microbiology · doi:10.1111/j.1365-2958.2005.04724.x · Cited by 44

Exploring the role of large conformational changes in the fidelity of DNA polymerase β

Xiang, Y., Goodman, M. F., Beard, W. A., Wilson, S. H., & Warshel, A. (2007) · Proteins Structure Function and Bioinformatics · doi:10.1002/prot.21668 · Cited by 43

Guanine–thymine intrastrand cross-linked lesion containing oligonucleotides: from chemical synthesis to in vitro enzymatic replication

Bellon, S., Gasparutto, D., Saint‐Pierre, C., & Cadet, J. (2006) · Organic & Biomolecular Chemistry · doi:10.1039/b609460k · Cited by 43

Novel conserved motifs in Rev1 C-terminus are required for mutagenic DNA damage tolerance

D’Souza, S., Waters, L. S., & Walker, G. C. (2008) · DNA repair · doi:10.1016/j.dnarep.2008.05.009 · Cited by 43

Suppression of error prone pathway is responsible for antimutagenic activity of honey

Saxena, S., Gautam, S., Maru, G. B., Kawle, D., & Sharma, A. K. (2012) · Food and Chemical Toxicology · doi:10.1016/j.fct.2012.01.003 · Cited by 43

Structural insight into dynamic bypass of the major cisplatin‐DNA adduct by Y‐family polymerase Dpo4

Wong, J. H. Y., Brown, J. A., Suo, Z., Blum, P., Nohmi, T., & Ling, H. (2010) · The EMBO Journal · doi:10.1038/emboj.2010.101 · Cited by 42

Specialised DNA polymerases in Escherichia coli: roles within multiple pathways

Henrikus, S. S., van Oijen, A. M., & Robinson, A. (2018) · Current Genetics · doi:10.1007/s00294-018-0840-x · Cited by 45

Adaptive Evolution: How Bacteria and Cancer Cells Survive Stressful Conditions and Drug Treatment

Russo, M., Sogari, A., & Bardelli, A. (2021) · Cancer Discovery · doi:10.1158/2159-8290.cd-20-1588 · Cited by 44

Biochemical Basis of Genotoxicity of Heterocyclic Arylamine Food Mutagens

Choi, J., Stover, J. S., Angel, K. C., Chowdhury, G., Rizzo, C. J., & Guengerich, F. P. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m605699200 · Cited by 42

Urea Lesion Formation in DNA as a Consequence of 7,8-Dihydro-8-oxoguanine Oxidation and Hydrolysis Provides a Potent Source of Point Mutations

Henderson, P. T., Neeley, W. L., Delaney, J. C., Gu, F., Niles, J. C., Hah, S. S., Tannenbaum, S. R., & Essigmann, J. M. (2004) · Chemical Research in Toxicology · doi:10.1021/tx049757k · Cited by 43

Ab initiosynthesis by DNA polymerases

Zyrina, N. V., Antipova, V. N., & Zheleznaya, L. A. (2013) · FEMS Microbiology Letters · doi:10.1111/1574-6968.12326 · Cited by 41

Human Translesion Polymerase κ Exhibits Enhanced Activity and Reduced Fidelity Two Nucleotides from G-Quadruplex DNA

Eddy, S., Tillman, M., Maddukuri, L., Ketkar, A. D., Zafar, M. K., & Eoff, R. L. (2016) · Biochemistry · doi:10.1021/acs.biochem.6b00374 · Cited by 43

A Comprehensive View of Translesion Synthesis in Escherichia coli

藤井, 慎., & Fuchs, R. P. (2020) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00002-20 · Cited by 41

Evidence for interplay among yeast replicative DNA polymerases alpha, delta and epsilon from studies of exonuclease and polymerase active site mutations

Pavlov, Y. I., Maki, S., Maki, H., & Kunkel, T. A. (2004) · BMC Biology · doi:10.1186/1741-7007-2-11 · Cited by 41

Bypass of DNA-Protein Cross-links Conjugated to the 7-Deazaguanine Position of DNA by Translesion Synthesis Polymerases

Wickramaratne, S., Ji, S., Mukherjee, S., Su, Y. R., Pence, M. G., Lior-Hoffmann, L., Fu, I., Broyde, S. B., Guengerich, F. P., Distefano, M. D., et al. (2016) · Journal of Biological Chemistry · doi:10.1074/jbc.m116.745257 · Cited by 40

Environmental tuning of mutation rates

Saint‐Ruf, C., & Matić, I. (2005) · Environmental Microbiology · doi:10.1046/j.1462-2920.2003.00397.x-i1 · Cited by 40

Development of valuable yeast strains using a novel mutagenesis technique for the effective production of therapeutic glycoproteins

Abe, H., Takaoka, Y., Chiba, Y., Sato, N., Ohgiya, S., Itadani, A., Hirashima, M., Shimoda, C., Jigami, Y., & Nakayama, K.-I. (2008) · Glycobiology · doi:10.1093/glycob/cwn157 · Cited by 39

Overexpression of human DNA polymerase (Pol ) in a Burkitt's lymphoma cell line affects the somatic hypermutation rate

Ruiz, J. F. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh929 · Cited by 39

The Steric Gate Amino Acid Tyrosine 112 Is Required for Efficient Mismatched-Primer Extension by Human DNA Polymerase κ

Niimi, N., Sassa, A., Katafuchi, A., Grúz, P., Fujimoto, H., Bonala, R., Johnson, F., Ohta, T., & Nohmi, T. (2009) · Biochemistry · doi:10.1021/bi900153t · Cited by 39

Prechemistry versus preorganization in DNA replication fidelity

Prasad, B. R., & Warshel, A. (2011) · Proteins Structure Function and Bioinformatics · doi:10.1002/prot.23128 · Cited by 38

RpoS, the Stress Response Sigma Factor, Plays a Dual Role in the Regulation of Escherichia coli 's Error-Prone DNA Polymerase IV

Storvik, K. A. M., & Foster, P. L. (2010) · Journal of Bacteriology · doi:10.1128/jb.00358-10 · Cited by 38

Role of DNA Polymerase IV in Escherichia coli SOS Mutator Activity

Kuban, W., Banach‐Orlowska, M., Schaaper, R. M., Jonczyk, P., & Fijałkowska, I. J. (2006) · Journal of Bacteriology · doi:10.1128/jb.01088-06 · Cited by 38

polι-dependent lesion bypass in vitro

Vaisman, A., Frank, E. G., McDonald, J. P., Tissier, A., & Woodgate, R. (2002) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/s0027-5107(02)00248-8 · Cited by 38

Aberrant expression of alternative DNA polymerases: A source of mutator phenotype as well as replicative stress in cancer

Hoffmann, J., & Cazaux, C. (2010) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2010.10.001 · Cited by 40

The World of Cyclic Dinucleotides in Bacterial Behavior

da Purificação, A. D., de Azevedo, N. M., de Araujo, G. G., de Souza, R. F., & Guzzo, C. R. (2020) · Molecules · doi:10.3390/molecules25102462 · Cited by 38

Conformational Changes during Normal and Error-Prone Incorporation of Nucleotides by a Y-Family DNA Polymerase Detected by 2-Aminopurine Fluorescence

DeLucia, A. M., Grindley, N. D. F., & Joyce, C. M. (2007) · Biochemistry · doi:10.1021/bi7006756 · Cited by 37

Quantitative analysis of the efficiency and mutagenic spectra of abasic lesion bypass catalyzed by human Y-family DNA polymerases

Sherrer, S. M., Fiala, K. A., Fowler, J. D., Newmister, S. A., Pryor, J. M., & Suo, Z. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq719 · Cited by 36

Genetic Analysis of Repair and Damage Tolerance Mechanisms for DNA-Protein Cross-Links in Escherichia coli

Salem, A. M. H., Nakano, T., Takuwa, M., Matoba, N., Tsuboi, T., Terato, H., Yamamoto, K., Yamada, M., Nohmi, T., & Ide, H. (2009) · Journal of Bacteriology · doi:10.1128/jb.00417-09 · Cited by 36

Chemical synthesis and translesion replication of a cis-syn cyclobutane thymine-uracil dimer

Takasawa, K. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh342 · Cited by 36

A Comprehensive Strategy to Discover Inhibitors of the Translesion Synthesis DNA Polymerase κ

Yamanaka, K., Dorjsuren, D., Eoff, R. L., Egli, M., Maloney, D. J., Jadhav, A., Simeonov, A., & Lloyd, R. S. (2012) · PLoS ONE · doi:10.1371/journal.pone.0045032 · Cited by 35

Study of involvement of ImuB and DnaE2 in stationary-phase mutagenesis in Pseudomonas putida

Koorits, L., Tegova, R., Tark‐Dame, M., Tarassova, K., Tover, A., & Kivisaar, M. (2007) · DNA repair · doi:10.1016/j.dnarep.2007.01.010 · Cited by 37

Lethality of bypass polymerases in Escherichia coli cells with a defective clamp loader complex of DNA polymerase III

Viguera, E., Petranović, M., Zahradka, D., Germain, K., Ehrlich, S. D., & Michel, B. (2003) · Molecular Microbiology · doi:10.1046/j.1365-2958.2003.03658.x · Cited by 35

The Properties of Steric Gate Mutants Reveal Different Constraints within the Active Sites of Y-family and A-family DNA Polymerases

DeLucia, A. M., Chaudhuri, S., Potapova, O., Grindley, N. D. F., & Joyce, C. M. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m604393200 · Cited by 35

The Spacious Active Site of a Y-Family DNA Polymerase Facilitates Promiscuous Nucleotide Incorporation Opposite a Bulky Carcinogen-DNA Adduct

Perlow-Poehnelt, R. A., Likhterov, I., Scicchitano, D. A., Geacintov, N. E., & Broyde, S. B. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m404332200 · Cited by 35

Interplay between replication and recombination in Escherichia coli : Impact of the alternative DNA polymerases

Delmas, S., & Matić, I. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0509012103 · Cited by 35

Absence of mutation in the putative tumor-suppressor gene KLF6 in colorectal cancers

Lièvre, A., Landi, B., Côté, J.-F., Veyrie, N., Zucman‐Rossi, J., Berger, A., & Laurent‐Puig, P. (2005) · Oncogene · doi:10.1038/sj.onc.1208867 · Cited by 35

Portraits of a Y‐family DNA polymerase

Yang, W. (2004) · FEBS Letters · doi:10.1016/j.febslet.2004.11.047 · Cited by 92

Structural diversity of the Y-family DNA polymerases

Pata, J. D. (2010) · Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics · doi:10.1016/j.bbapap.2010.01.020 · Cited by 93

Eukaryotic error-prone DNA polymerases: The presumed roles in replication, repair, and mutagenesis

Krutyakov, V. M. (2006) · Molecular Biology · doi:10.1134/s0026893306010018 · Cited by 18

Damage repair DNA polymerases Y

Yang, W. (2003) · Current Opinion in Structural Biology · doi:10.1016/s0959-440x(02)00003-9 · Cited by 152

Recent Insight into the Kinetic Mechanisms and Conformational Dynamics of Y-Family DNA Polymerases

Maxwell, B. A., & Suo, Z. (2014) · Biochemistry · doi:10.1021/bi5000405 · Cited by 41