Error-Prone Repair DNA Polymerases in Prokaryotes and Eukaryotes

Class Switch Recombination and Hypermutation Require Activation-Induced Cytidine Deaminase (AID), a Potential RNA Editing Enzyme

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Ultraviolet mutagenesis and inducible DNA repair in Escherichia coli

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Activation-Induced Cytidine Deaminase (AID) Deficiency Causes the Autosomal Recessive Form of the Hyper-IgM Syndrome (HIGM2)

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The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase η

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Biochemistry of homologous recombination in Escherichia coli

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The importance of repairing stalled replication forks

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Hypermutation of multiple proto-oncogenes in B-cell diffuse large-cell lymphomas

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DNA Replication Fidelity

Kunkel, T. A., & Bebenek, K. (2000) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.69.1.497 · Cited by 1,003

Recombinational Repair of DNA Damage in Escherichia coli and Bacteriophage λ

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The Y-Family of DNA Polymerases

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Protease-DeficientSaccharomycescerevisiaeStrains for the Synthesis of Human-Compatible Glycoproteins

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Role of Escherichia coli DNA polymerase I in chromosomal DNA replication fidelity

Makiela‐Dzbenska, K., Jaszczur, M. M., Banach‐Orlowska, M., Jonczyk, P., Schaaper, R. M., & Fijałkowska, I. J. (2009) · Molecular Microbiology · doi:10.1111/j.1365-2958.2009.06921.x · Cited by 34

Oxidative DNA Damage Defense Systems in Avoidance of Stationary-Phase Mutagenesis in Pseudomonas putida

Saumaa, S., Tover, A., Tark‐Dame, M., Tegova, R., & Kivisaar, M. (2007) · Journal of Bacteriology · doi:10.1128/jb.00518-07 · Cited by 33

Possible role of adaptive mutation in resistance to antiandrogen in prostate cancer cells

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Molecular basis of transcriptional fidelity and DNA lesion-induced transcriptional mutagenesis

Xu, L., Da, L., Plouffe, S. W., Chong, J. P. C., Kool, E. T., & Wang, D. (2014) · DNA repair · doi:10.1016/j.dnarep.2014.03.024 · Cited by 32

Pilin Antigenic Variation Occurs Independently of the RecBCD Pathway in Neisseria gonorrhoeae

Helm, R. A., & Seifert, H. S. (2009) · Journal of Bacteriology · doi:10.1128/jb.00535-09 · Cited by 32

NMR Structure of the Human Rad18 Zinc Finger in Complex with Ubiquitin Defines a Class of UBZ Domains in Proteins Linked to the DNA Damage Response

Rizzo, A. A., Salerno, P., Bezsonova, I., & Korzhnev, D. M. (2014) · Biochemistry · doi:10.1021/bi500823h · Cited by 35

Interplay of DNA repair, homologous recombination, and DNA polymerases in resistance to the DNA damaging agent 4-nitroquinoline-1-oxide in Escherichia coli

Williams, A. B., Hetrick, K. M., & Foster, P. L. (2010) · DNA repair · doi:10.1016/j.dnarep.2010.07.008 · Cited by 32

Maintaining replication fork integrity in UV-irradiated Escherichia coli cells

Rudolph, C. J., Upton, A. L., & Lloyd, R. G. (2008) · DNA repair · doi:10.1016/j.dnarep.2008.06.012 · Cited by 33

Proficient and Accurate Bypass of Persistent DNA Lesions by DinB DNA Polymerases

Jarosz, D. F., Godoy, V. G., & Walker, G. C. (2007) · Cell Cycle · doi:10.4161/cc.6.7.4065 · Cited by 32

Bypass of Aflatoxin B1 Adducts by the Sulfolobus solfataricus DNA Polymerase IV

Banerjee, S., Brown, K. L., Egli, M., & Stone, M. P. (2011) · Journal of the American Chemical Society · doi:10.1021/ja2015668 · Cited by 32

Simulated sunlight and benzo[a]pyrene diol epoxide induced mutagenesis in the human p53 gene evaluated by the yeast functional assay: lack of correspondence to tumor mutation spectra

Yoon, J. H. (2003) · Carcinogenesis · doi:10.1093/carcin/24.1.113 · Cited by 32

The role of DNA polymerase ι in UV mutational spectra

Choi, J., Nia, A. B., Lee, D.-H., Lee, C.-S., & Pfeifer, G. P. (2006) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2006.01.003 · Cited by 33

Structure of a Mutant Form of Proliferating Cell Nuclear Antigen That Blocks Translesion DNA Synthesis

Freudenthal, B., Ramaswamy, S., Hingorani, M., & Washington, M. T. (2008) · Biochemistry · doi:10.1021/bi8017762 · Cited by 31

High-accuracy lagging-strand DNA replication mediated by DNA polymerase dissociation

Masłowska, K. H., Makiela‐Dzbenska, K., Mo, J., Fijałkowska, I. J., & Schaaper, R. M. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1720353115 · Cited by 31

Additive effects of variants of unknown significance in replication repair-associated DNA polymerase genes on mutational burden and prognosis across diverse cancers

Ying, J., Yang, L., Yin, J. C., Xia, G., Xing, M., Chen, X., Pang, J., Wu, Y., Bao, H., Wu, X., et al. (2021) · Journal for ImmunoTherapy of Cancer · doi:10.1136/jitc-2021-002336 · Cited by 32

Comparative Analysis of Eubacterial DNA Polymerase III Alpha Subunits

Zhao, X., Hu, J., & Yu, J. M. (2006) · Genomics Proteomics & Bioinformatics · doi:10.1016/s1672-0229(07)60001-1 · Cited by 31

The handbook of plant mutation screening: mining of natural and induced alleles.

Meksem, K., & Kahl, G. (2010) · Cited by 31

Directed evolution of novel polymerases

Holmberg, R. C., Henry, A. A., & Romesberg, F. E. (2005) · Biomolecular Engineering · doi:10.1016/j.bioeng.2004.12.001 · Cited by 31

Human DNA Primase Uses Watson−Crick Hydrogen Bonds To Distinguish between Correct and Incorrect Nucleoside Triphosphates

Moore, C. L., Živković, A., Engels, J. W., & Kuchta, R. D. (2004) · Biochemistry · doi:10.1021/bi0490791 · Cited by 31

Thymidine glycol: the effect on DNA molecular structure and enzymatic processing

Dolinnaya, N. G., Kubareva, E. A., Romanova, E. A., Trikin, R. M., & Oretskaya, T. S. (2012) · Biochimie · doi:10.1016/j.biochi.2012.09.008 · Cited by 30

REV1 accumulates in DNA damage-induced nuclear foci in human cells and is implicated in mutagenesis by benzo[a]pyrenediolepoxide

Mukhopadhyay, S. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh903 · Cited by 30

Homology modeling of four Y-family, lesion-bypass DNA polymerases: The case that E. coli Pol IV and human Pol κ are orthologs, and E. coli Pol V and human Pol η are orthologs

Lee, C. H., Chandani, S., & Loechler, E. L. (2006) · Journal of Molecular Graphics and Modelling · doi:10.1016/j.jmgm.2005.10.009 · Cited by 30

Analysis of UV-induced mutation spectra in Escherichia coli by DNA polymerase η from Arabidopsis thaliana

Santiago, M. J., Alejandre-Durán, E., & Ruiz‐Rubio, M. (2006) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2006.05.036 · Cited by 30

The Reopening Rate of the Fingers Domain Is a Determinant of Base Selectivity for RB69 DNA Polymerase

Lee, H. R., Wang, M., & Konigsberg, W. H. (2009) · Biochemistry · doi:10.1021/bi8016284 · Cited by 29

Nucleotide analogues as probes for DNA polymerases

Jung, K., & Marx, A. (2005) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-005-5117-0 · Cited by 29

Increased dNTP Binding Affinity Reveals a Nonprocessive Role for Escherichia coli β Clamp with DNA Polymerase IV

Bertram, J. G., Bloom, L. B., O’Donnell, M. E., & Goodman, M. F. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.c400265200 · Cited by 29

RNA polymerase II transcriptional fidelity control and its functional interplay with DNA modifications

Xu, L., Wang, W., Chong, J. P. C., Shin, J. H., Xu, J., & Wang, D. (2015) · Critical Reviews in Biochemistry and Molecular Biology · doi:10.3109/10409238.2015.1087960 · Cited by 28

DNA polymerases η and κ are responsible for error-free translesion DNA synthesis activity over a cis–syn thymine dimer in Xenopus laevis oocyte extracts

Yagi, Y., Ogawara, D., Iwai, S., Hanaoka, F., Akiyama, M., & Maki, H. (2005) · DNA repair · doi:10.1016/j.dnarep.2005.06.010 · Cited by 28

RAD51B plays an essential role during somatic and meiotic recombination in Physcomitrella

Charlot, F., Chelysheva, L. A., Kamisugi, Y., Vrielynck, N., Guyon‐Debast, A., Epert, A., Guin, S. L., Schaefer, D. G., Cuming, A. C., Grelon, M., et al. (2014) · Nucleic Acids Research · doi:10.1093/nar/gku890 · Cited by 28

Multiple Strategies for Translesion Synthesis in Bacteria

Ippoliti, P. J., DeLateur, N. A., Jones, K. M., & Beuning, P. J. (2012) · Cells · doi:10.3390/cells1040799 · Cited by 28

Connecting Replication and Repair: YoaA, a Helicase-Related Protein, Promotes Azidothymidine Tolerance through Association with Chi, an Accessory Clamp Loader Protein

Brown, L. T., Sutera, V. A., Zhou, S., Weitzel, C. S., Cheng, Y., & Lovett, S. T. (2015) · PLoS Genetics · doi:10.1371/journal.pgen.1005651 · Cited by 28

Somatic hypermutation in immunity and cancer: Critical analysis of strand-biased and codon-context mutation signatures

Steele, E. J. (2016) · DNA repair · doi:10.1016/j.dnarep.2016.07.001 · Cited by 28

Replisome dynamics and use of DNA trombone loops to bypass replication blocks

Yao, N. Y., & O’Donnell, M. E. (2008) · Molecular BioSystems · doi:10.1039/b811097b · Cited by 30

DNA polymerase V activity is autoregulated by a novel intrinsic DNA-dependent ATPase

Erdem, A. L., Jaszczur, M. M., Bertram, J. G., Woodgate, R., Cox, M. M., & Goodman, M. F. (2014) · eLife · doi:10.7554/elife.02384 · Cited by 28

Overproduction of DNA polymerase eta does not raise the spontaneous mutation rate in diploid human fibroblasts

King, N. M., Nikolaishvili‐Feinberg, N., Bryant, M. F., Luche, D. D., Heffernan, T. P., Simpson, D. A., Hanaoka, F., Kaufmann, W. K., & Cordeiro‐Stone, M. (2005) · DNA repair · doi:10.1016/j.dnarep.2005.04.002 · Cited by 30

Discovery of DNA Polymerase

Lehman, I. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.x300002200 · Cited by 28

Unlocking the steric gate of DNA polymerase η leads to increased genomic instability in Saccharomyces cerevisiae

Donigan, K. A., Cerritelli, S. M., McDonald, J. P., Vaisman, A., Crouch, R. J., & Woodgate, R. (2015) · DNA repair · doi:10.1016/j.dnarep.2015.07.002 · Cited by 28

The L561A Substitution in the Nascent Base-Pair Binding Pocket of RB69 DNA Polymerase Reduces Base Discrimination

Zhang, H., Rhee, C., Bębenek, A., Drake, J. W., Wang, J., & Konigsberg, W. H. (2006) · Biochemistry · doi:10.1021/bi052099y · Cited by 27

Kinetic Analysis of the Bypass of a Bulky DNA Lesion Catalyzed by Human Y-Family DNA Polymerases

Sherrer, S. M., Sanman, L. E., Xia, C. X., Bolin, E. R., Malik, C. K., Efthimiopoulos, G., Basu, A. K., & Suo, Z. (2012) · Chemical Research in Toxicology · doi:10.1021/tx200531y · Cited by 27

Genesis of the strand‐biased signature in somatic hypermutation of rearranged immunoglobulin variable genes

Steele, E. J., Franklin, A., & Blanden, R. V. (2004) · Immunology and Cell Biology · doi:10.1046/j.0818-9641.2004.01224.x · Cited by 27

Extending the Understanding of Mutagenicity: Structural Insights into Primer-extension Past a Benzo[a]pyrene Diol Epoxide-DNA adduct

Perlow, R. A., & Broyde, S. B. (2003) · Journal of Molecular Biology · doi:10.1016/s0022-2836(03)00187-6 · Cited by 27

The Role of E3 Ligase Pirh2 in Disease

Daks, A. A., Fedorova, O., Parfenyev, S. E., Nevzorov, I. A., Shuvalov, O. Y., & Barlev, N. A. (2022) · Cells · doi:10.3390/cells11091515 · Cited by 19

Interactions and Localization of Escherichia coli Error-Prone DNA Polymerase IV after DNA Damage

Mallik, S., Popodi, E. M., Hanson, A. J., & Foster, P. L. (2015) · Journal of Bacteriology · doi:10.1128/jb.00101-15 · Cited by 26

In Vitro Replication and Repair Studies of Tandem Lesions Containing Neighboring Thymidine Glycol and 8-Oxo-7,8-dihydro-2′-deoxyguanosine

Jiang, Y., Wang, Y., & Wang, Y. (2009) · Chemical Research in Toxicology · doi:10.1021/tx8003449 · Cited by 26

N-Aroyl Indole Thiobarbituric Acids as Inhibitors of DNA Repair and Replication Stress Response Polymerases

Coggins, G. E., Maddukuri, L., Penthala, N. R., Hartman, J. H., Eddy, S., Ketkar, A. D., Crooks, P. A., & Eoff, R. L. (2013) · ACS Chemical Biology · doi:10.1021/cb400305r · Cited by 26

DNA Polymerases ImuC and DinB Are Involved in DNA Alkylation Damage Tolerance in Pseudomonas aeruginosa and Pseudomonas putida

Jatsenko, T., Sidorenko, J., Saumaa, S., & Kivisaar, M. (2017) · PLoS ONE · doi:10.1371/journal.pone.0170719 · Cited by 26

Degradation of nitroaromatic compounds: a model to study evolution of metabolic pathways

Kivisaar, M. (2009) · Molecular Microbiology · doi:10.1111/j.1365-2958.2009.06905.x · Cited by 25

A Proposal: Source of single strand DNA that elicits the SOS response

Indiani, C. (2012) · Frontiers in bioscience · doi:10.2741/4102 · Cited by 26

Effects of non‐catalytic, distal amino acid residues on activity of E. coli DinB (DNA polymerase IV)

Walsh, J. M., Parasuram, R., Rajput, P. R., Rozners, E., Ondrechen, M. J., & Beuning, P. J. (2012) · Environmental and Molecular Mutagenesis · doi:10.1002/em.21730 · Cited by 25

Breaking bad: The mutagenic effect of DNA repair

Chen, J., & Furano, A. V. (2015) · DNA repair · doi:10.1016/j.dnarep.2015.04.012 · Cited by 27

A binding free energy decomposition approach for accurate calculations of the fidelity of DNA polymerases

Rucker, R. B., Oelschlaeger, P., & Warshel, A. (2009) · Proteins Structure Function and Bioinformatics · doi:10.1002/prot.22596 · Cited by 25

Thermodynamic and in Vitro Replication Studies of an Intrastrand G[8-5]C Cross-Link Lesion

Gu, C., & Wang, Y. (2005) · Biochemistry · doi:10.1021/bi050036+ · Cited by 25

A role for DNA polymerase V in G→T mutations from the major benzo[a]pyrene N2-dG adduct when studied in a 5′-TT sequence in E. coli

Yin, J., Seo, K. Y., & Loechler, E. L. (2004) · DNA repair · doi:10.1016/j.dnarep.2003.11.012 · Cited by 25

Mutagenesis studies with four stereoisomeric N2-dG benzo[a]pyrene adducts in the identical 5′-CGC sequence used in NMR studies: G→T mutations dominate in each case

Seo, K., Nagalingam, A., Tiffany, M. R., & Loechler, E. L. (2005) · Mutagenesis · doi:10.1093/mutage/gei061 · Cited by 25

Base Selectivity Is Impaired by Mutants that Perturb Hydrogen Bonding Networks in the RB69 DNA Polymerase Active Site

Yang, G., Wang, J., & Konigsberg, W. H. (2005) · Biochemistry · doi:10.1021/bi047921x · Cited by 25

Bacterial Strategies for Growth on Aromatic Compounds

George, K. W., & Hay, A. G. (2011) · Advances in applied microbiology · doi:10.1016/b978-0-12-387022-3.00005-7 · Cited by 24

Phenylalanine 171 is a molecular brake for translesion synthesis across benzo[a]pyrene-guanine adducts by human DNA polymerase kappa

Sassa, A., Niimi, N., Fujimoto, H., Katafuchi, A., Grúz, P., Yasui, M., Gupta, R. C., Johnson, F., Ohta, T., & Nohmi, T. (2010) · Mutation Research/Genetic Toxicology and Environmental Mutagenesis · doi:10.1016/j.mrgentox.2010.11.002 · Cited by 24

Visualizing mutagenic repair: novel insights into bacterial translesion synthesis

Joseph, A. M., & Badrinarayanan, A. (2020) · FEMS Microbiology Reviews · doi:10.1093/femsre/fuaa023 · Cited by 24

Spontaneous multiple mutations show both proximal spacing consistent with chronocoordinate events and alterations with p53-deficiency

Hill, K. A., Wang, J., Hagman, K. D. F., Scaringe, W. A., & Sommer, S. S. (2004) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2004.05.005 · Cited by 24

Compartmentalized Self-Replication: A Novel Method for the Directed Evolution of Polymerases and Other Enzymes

Ghadessy, F. J., & Holliger, P. (2006) · Humana Press eBooks · doi:10.1385/1-59745-187-8:237 · Cited by 24

Pre-steady-state Kinetic Characterization of the DinB Homologue DNA Polymerase of Sulfolobus solfataricus

Cramer, J., & Restle, T. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m504481200 · Cited by 24

Somatic Mutations in Catalytic Core ofPOLKReported in Prostate Cancer Alter Translesion DNA Synthesis

Yadav, S., Mukhopadhyay, S., Anbalagan, M., & Makridakis, N. M. (2015) · Human Mutation · doi:10.1002/humu.22820 · Cited by 23

Engineering of the Translesion DNA Synthesis Pathway Enables Controllable C-to-G and C-to-A Base Editing in Corynebacterium glutamicum

Wang, Y., Zhao, D., Sun, L., Wang, J., Fan, L., Cheng, G., Zhang, Z., Ni, X., Feng, J., Wang, M., et al. (2022) · ACS Synthetic Biology · doi:10.1021/acssynbio.2c00265 · Cited by 23

The Rate and Character of Spontaneous Mutation in Thermus thermophilus

Mackwan, R. R., Carver, G. T., Kissling, G. E., Drake, J. W., & Grogan, D. W. (2008) · Genetics · doi:10.1534/genetics.108.089086 · Cited by 23

Contribution of Partial Charge Interactions and Base Stacking to the Efficiency of Primer Extension at and beyond Abasic Sites in DNA

Xia, S., Vashishtha, A. K., Bulkley, D. P., Eom, S. H., Wang, J., & Konigsberg, W. H. (2012) · Biochemistry · doi:10.1021/bi300296q · Cited by 23

Learning from Directed Evolution: Thermus aquaticus DNA Polymerase Mutants with Translesion Synthesis Activity

Obeid, S., Schnur, A., Gloeckner, C., Blatter, N., Welte, W., Diederichs, K., & Marx, A. (2011) · ChemBioChem · doi:10.1002/cbic.201000783 · Cited by 23

Structures of DNA Polymerases Caught Processing Size‐Augmented Nucleotide Probes

Betz, K., Streckenbach, F., Schnur, A., Exner, T. E., Welte, W., Diederichs, K., & Marx, A. (2010) · Angewandte Chemie International Edition · doi:10.1002/anie.200905724 · Cited by 23

Ongoing evolution of Pseudomonas aeruginosa PAO1 sublines complicates studies of DNA damage repair and tolerance

Sidorenko, J., Jatsenko, T., & Kivisaar, M. (2017) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2017.03.005 · Cited by 23

Roles of the Y-family DNA polymerase Dbh in accurate replication of the Sulfolobus genome at high temperature

Sakofsky, C. J., Foster, P. L., & Grogan, D. W. (2012) · DNA repair · doi:10.1016/j.dnarep.2012.01.005 · Cited by 22

The UV responses of bacterioneuston and bacterioplankton isolates depend on the physiological condition and involve a metabolic shift

Santos, A. L., Baptista, I. I. R., Lopes, S., Henriques, I. S., Gomes, N. C. M., Almeida, A., Correia, A. C. M., & Cunha, Â. (2012) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2012.01336.x · Cited by 22

New discoveries linking transcription to DNA repair and damage tolerance pathways

Cohen, S., & Walker, G. C. (2011) · Transcription · doi:10.4161/trns.2.1.14228 · Cited by 22

Pre-steady state kinetic studies show that an abasic site is a cognate lesion for the yeast Rev1 protein

Pryor, J. M., & Washington, M. T. (2011) · DNA repair · doi:10.1016/j.dnarep.2011.08.011 · Cited by 24

RecA‐independent recombination: Dependence on the Escherichia coli RarA protein

Jain, K., Wood, E. A., Romero, Z. J., & Cox, M. M. (2020) · Molecular Microbiology · doi:10.1111/mmi.14655 · Cited by 24

DNA Metabolism in Mycobacterial Pathogenesis

Warner, D. F., Tønjum, T., & Mizrahi, V. (2013) · Current topics in microbiology and immunology · doi:10.1007/82_2013_328 · Cited by 22

Somatic microindels: analysis in mouse soma and comparison with the human germline

Hagman, K. D. F., Hill, K. A., Li, K., Li, W., Scaringe, W. A., Wang, J., Gu, D., & Sommer, S. S. (2006) · Human Mutation · doi:10.1002/humu.20416 · Cited by 23

A Computational Study of the Hydrolysis of dGTP Analogues with Halomethylene-Modified Leaving Groups in Solution: Implications for the Mechanism of DNA Polymerases

Kamerlin, S. C. L., McKenna, C. E., Goodman, M. F., & Warshel, A. (2009) · Biochemistry · doi:10.1021/bi900140c · Cited by 22

What do we think life is? A simple illustration and its consequences

Bains, W. (2013) · International Journal of Astrobiology · doi:10.1017/s1473550413000281 · Cited by 22

How are specialized (low-fidelity) eukaryotic polymerases selected and switched with high-fidelity polymerases during translesion DNA synthesis?

Fischhaber, P. L., & Friedberg, E. C. (2004) · DNA repair · doi:10.1016/j.dnarep.2004.08.011 · Cited by 22

Escherichia coli DNA Polymerase V Subunit Exchange

Shen, X., Woodgate, R., & Goodman, M. F. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m310127200 · Cited by 22

The problem of the eukaryotic genome size

Patrushev, L. I., & Minkevich, I. G. (2008) · Biochemistry (Moscow) · doi:10.1134/s0006297908130117 · Cited by 25

Insertion of dNTPs Opposite the 1,N2-Propanodeoxyguanosine Adduct by Sulfolobus solfataricus P2 DNA Polymerase IV

Wang, Y., Musser, S. K., Saleh, S., Marnett, L. J., Egli, M., & Stone, M. P. (2008) · Biochemistry · doi:10.1021/bi800152j · Cited by 22

Multiple solutions to inefficient lesion bypass by T7 DNA polymerase

McCulloch, S. D., & Kunkel, T. A. (2006) · DNA repair · doi:10.1016/j.dnarep.2006.06.003 · Cited by 21

Role of High-Fidelity Escherichia coli DNA Polymerase I in Replication Bypass of a Deoxyadenosine DNA-Peptide Cross-Link

Yamanaka, K., Minko, I. G., Finkel, S. E., Goodman, M. F., & Lloyd, R. S. (2011) · Journal of Bacteriology · doi:10.1128/jb.01550-10 · Cited by 21

Adduct formation and repair, and translesion DNA synthesis across the adducts in human cells exposed to 3-nitrobenzanthrone

Kawanishi, M., Fujikawa, Y., Ishii, H., Nishida, H., Higashigaki, Y., Kanno, T., Matsuda, T., Takamura‐Enya, T., & Yagi, T. (2013) · Mutation Research/Genetic Toxicology and Environmental Mutagenesis · doi:10.1016/j.mrgentox.2013.03.005 · Cited by 21

Frameshift Deletion by Sulfolobus solfataricus P2 DNA Polymerase Dpo4 T239W Is Selective for Purines and Involves Normal Conformational Change Followed by Slow Phosphodiester Bond Formation

Zhang, H., Beckman, J. W., & Guengerich, F. P. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m109.067397 · Cited by 21

Biological and Therapeutic Relevance of Nonreplicative DNA Polymerases to Cancer

Parsons, J. L., Nicolay, N. H., & Sharma, R. A. (2012) · Antioxidants and Redox Signaling · doi:10.1089/ars.2011.4203 · Cited by 24

ADAR deaminase A-to-I editing of DNA and RNA moieties of RNA:DNA hybrids has implications for the mechanism of Ig somatic hypermutation

Steele, E. J., & Lindley, R. A. (2017) · DNA repair · doi:10.1016/j.dnarep.2017.04.004 · Cited by 21

Effect of deletion of SOS‐induced polymerases, pol II, IV, and V, on spontaneous mutagenesis in Escherichia coli mutD5

Nowosielska, A., Janion, C., & Grzesiuk, E. (2004) · Environmental and Molecular Mutagenesis · doi:10.1002/em.20019 · Cited by 21

Terminal deoxynucleotidyl transferases from elasmobranchs reveal structural conservation within vertebrates

Bartl, S., Miracle, A. L., Rumfelt, L. L., Kepler, T. B., Mochon, E., Litman, G. W., & Flajnik, M. F. (2003) · Immunogenetics · doi:10.1007/s00251-003-0608-3 · Cited by 21

Hypoxia-inducible factor-1 mediates the expression of DNA polymerase ι in human tumor cells

Ito, A., Koshikawa, N., Mochizuki, S., Omura, K., & Takenaga, K. (2006) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2006.10.048 · Cited by 21

Stereochemical Features of Lewis Acid-Promoted Glycosidations Involving 4‘-Spiroannulated DNA Building Blocks

Paquette, L. A., Seekamp, C. K., Kahane, A. L., Hilmey, D. G., & Gallucci, J. C. (2004) · The Journal of Organic Chemistry · doi:10.1021/jo048904g · Cited by 21

Quantifying the energetic contributions of desolvation and π-electron density during translesion DNA synthesis

Motea, E. A., Lee, I., & Berdis, A. J. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq925 · Cited by 20

Progress in Enzyme-Catalyzed C(sp 3 )–H Amination

Xu, W., Gao, Y.-D., Su, P., Huang, L., He, Z., & Yang, L. (2024) · ACS Catalysis · doi:10.1021/acscatal.4c04947 · Cited by 20

Ubiquitylation of Proliferating Cell Nuclear Antigen and Recruitment of Human DNA Polymerase η

Nikolaishvili‐Feinberg, N., Jenkins, G. S., Nevis, K. R., Staus, D. P., Scarlett, C. O., Ünsal-Kaçmaz, K., Kaufmann, W. K., & Cordeiro‐Stone, M. (2008) · Biochemistry · doi:10.1021/bi702329h · Cited by 20

Leukotriene Biosynthesis Inhibitor MK886 Impedes DNA Polymerase Activity

Ketkar, A. D., Zafar, M. K., Maddukuri, L., Yamanaka, K., Banerjee, S., Egli, M., Choi, J.-Y., Lloyd, R. S., & Eoff, R. L. (2013) · Chemical Research in Toxicology · doi:10.1021/tx300392m · Cited by 20

Pol V-Mediated Translesion Synthesis Elicits Localized Untargeted Mutagenesis during Post-replicative Gap Repair

Isogawa, A., Ong, J. L., Potapov, V., Fuchs, R. P., & 藤井, 慎. (2018) · Cell Reports · doi:10.1016/j.celrep.2018.06.120 · Cited by 20

Contribution of increased mutagenesis to the evolution of pollutants-degrading indigenous bacteria

Ilmjärv, T., Naanuri, E., & Kivisaar, M. (2017) · PLoS ONE · doi:10.1371/journal.pone.0182484 · Cited by 22

Systematic biochemical analysis of somatic missense mutations in DNA polymerase β found in prostate cancer reveal alteration of enzymatic function

An, C. L., Chen, D., & Makridakis, N. M. (2011) · Human Mutation · doi:10.1002/humu.21465 · Cited by 19

Portraits of a Y‐family DNA polymerase

Yang, W. (2004) · FEBS Letters · doi:10.1016/j.febslet.2004.11.047 · Cited by 92

Structural diversity of the Y-family DNA polymerases

Pata, J. D. (2010) · Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics · doi:10.1016/j.bbapap.2010.01.020 · Cited by 93

Eukaryotic error-prone DNA polymerases: The presumed roles in replication, repair, and mutagenesis

Krutyakov, V. M. (2006) · Molecular Biology · doi:10.1134/s0026893306010018 · Cited by 18

Damage repair DNA polymerases Y

Yang, W. (2003) · Current Opinion in Structural Biology · doi:10.1016/s0959-440x(02)00003-9 · Cited by 152

Recent Insight into the Kinetic Mechanisms and Conformational Dynamics of Y-Family DNA Polymerases

Maxwell, B. A., & Suo, Z. (2014) · Biochemistry · doi:10.1021/bi5000405 · Cited by 41