Do you know the sex of your cells?
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Do you know the sex of your cells? Not a question that is frequently heard around the lab bench, yet thanks to recent research is probably one that should be asked. It is self-evident that cervical epithelial cells would be derived from female tissue and prostate cells from a male subject (exemplified by HeLa and LnCaP, respectively), yet beyond these obvious examples, it would be true to say that the sex of cell lines derived from non-reproductive tissue, such as lung, intestine, kidney, for example, is given minimal if any thought. After all, what possible impact could the presence of a Y chromosome have on the biochemistry and cell biology of tissues such as the exocrine pancreatic acini? Intriguingly, recent evidence has suggested that far from being irrelevant, genes expressed on the sex chromosomes can have a marked impact on the biology of such diverse tissues as neurons and renal cells. It is also policy of AJP-Cell Physiology that the source of all cells utilized (species, sex, etc.) should be clearly indicated when submitting an article for publication, an instruction that is rarely followed ( http://www.the-aps.org/mm/Publications/Info-For-Authors/Composition ). In this review we discuss recent data arguing that the sex of cells being used in experiments can impact the cell's biology, and we provide a table outlining the sex of cell lines that have appeared in AJP-Cell Physiology over the past decade.
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In female cells, culture conditions can lead to a release of the epigenetic inactivation of one of the two X-chromosomes and consequently expression of gene products from both X-chromosomes, coding for a large number of genes involved in metabolism and general cell function.
“In female cells, culture conditions can lead to a release of the epigenetic inactivation of one of the two X-chromosomes and, consequently, the expression of gene products from both X-chromosomes, coding for a large number of genes involved in metabolism and general cell function (Shah et al., 2013).”
From In Vitro research Reproducibility: Keeping up High Standards (2019) · cites this paper as Shah et al., 2013
Cites
Correction of the F508del-CFTR protein processing defect in vitro by the investigational drug VX-809
Van Goor, F., Hadida, S., Grootenhuis, P. D. J., Burton, B., Stack, J. H., Straley, K. S., Decker, C. J., Miller, M., McCartney, J., Olson, E. R., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1105787108 · Cited by 1,088 · see citing works
Reduced prefrontal activity predicts exaggerated striatal dopaminergic function in schizophrenia
Meyer-Lindenberg, A., Miletich, R. S., Kohn, P. D., Esposito, G., Carson, R. E., Quarantelli, M., Weinberger, D. R., & Berman, K. F. (2002) · Nature Neuroscience · doi:10.1038/nn804 · Cited by 652 · see citing works
HeLa cells 50 years on: the good, the bad and the ugly
Masters, J. R. (2002) · Nature Reviews Cancer · doi:10.1038/nrc775 · Cited by 560 · see citing works
Check your cultures! A list of cross‐contaminated or misidentified cell lines
Capes‐Davis, A., Theodosopoulos, G., Atkin, I., Drexler, H. G., Kohara, A., MacLeod, R. A. F., Masters, J. R., Nakamura, Y., Reid, Y. A., Reddel, R. R., et al. (2010) · International Journal of Cancer · doi:10.1002/ijc.25242 · Cited by 520 · cited 1× · see citing works
“However, contamination by HeLa cells have been estimated to range between 10% and 20% of all cell lines in use (150), and cross-contamination remains a major ongoing problem in modern cell cultures (32, 173).”
Human myeloid leukemia cell lines: a review
Koeffler, H., & Golde, D. (1980) · Blood · doi:10.1182/blood.v56.3.344.344 · Cited by 349 · see citing works
Sex chromosome genes directly affect brain sexual differentiation
Carruth, L. L., Reisert, I., & Arnold, A. P. (2002) · Nature Neuroscience · doi:10.1038/nn922 · Cited by 298 · see citing works
Deasy, B. M., Lu, A., Tebbets, J. C., Feduska, J. M., Schugar, R. C., Pollett, J. B., Sun, B., Urish, K. L., Gharaibeh, B. M., Cao, B., et al. (2007) · The Journal of Cell Biology · doi:10.1083/jcb.200612094 · Cited by 251 · see citing works
Sex and Gender Differences in Alzheimer's Disease: Recommendations for Future Research
Carter, C. L., Resnick, E. M., Mallampalli, M., & Kalbarczyk, A. (2012) · Journal of Women's Health · doi:10.1089/jwh.2012.3789 · Cited by 231 · see citing works
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Epigenetic changes during aging and their reprogramming potential
Kane, A. E., & Sinclair, D. A. (2019) · Critical Reviews in Biochemistry and Molecular Biology · doi:10.1080/10409238.2019.1570075 · Cited by 283 · see citing works
Rich-Edwards, J. W., Kaiser, U. B., Chen, G. L., Manson, J. E., & Goldstein, J. M. (2018) · Endocrine Reviews · doi:10.1210/er.2017-00246 · Cited by 273 · see citing works
Rechlin, R. K., Splinter, T. F. L., Hodges, T. E., Albert, A. Y., & Galea, L. A. M. (2022) · Nature Communications · doi:10.1038/s41467-022-29903-3 · Cited by 218 · see citing works
Sex inclusion in basic research drives discovery
Klein, S. L., Schiebinger, L., Stefanick, M. L., Cahill, L., Danska, J., de Vries, G. J., Kibbe, M. R., McCarthy, M. M., Mogil, J. S., Woodruff, T. K., et al. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1502843112 · Cited by 238 · see citing works
Let’s talk about sex: Differences in drug therapy in males and females
Madla, C. M., Gavins, F. K. H., Merchant, H. A., Orlu, M., Murdan, S., & Basit, A. W. (2021) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2021.05.014 · Cited by 167 · see citing works
In Vitro research Reproducibility: Keeping up High Standards
Hirsch, C., & Schildknecht, S. (2019) · Frontiers in Pharmacology · doi:10.3389/fphar.2019.01484 · Cited by 161 · see citing works
Genes that escape X chromosome inactivation modulate sex differences in valve myofibroblasts
Aguado, B. A., Walker, C. J., Grim, J. C., Schroeder, M. E., Batan, D., Vogt, B. J., Rodriguez, A. G., Schwisow, J. A., Moulton, K. S., Weiss, R. M., et al. (2022) · Circulation · doi:10.1161/circulationaha.121.054108 · Cited by 87 · see citing works
Integrated Quantitative Transcriptome Maps of Human Trisomy 21 Tissues and Cells
Pelleri, M. C., Cattani, C., Vitale, L., Antonaros, F., Strippoli, P., Locatelli, C., Cocchi, G., Piovesan, A., & Caracausi, M. (2018) · Frontiers in Genetics · doi:10.3389/fgene.2018.00125 · Cited by 61 · see citing works
Korch, C., Hall, E. M., Dirks, W. G., Ewing, M., Faries, M., Varella‐Garcia, M., Robinson, S., Storts, D., Turner, J. A., Wang, Y., et al. (2018) · International Journal of Cancer · doi:10.1002/ijc.31067 · Cited by 53 · see citing works
“Consideration of sex in the design and interpretation of preclinical studies is important and has been highlighted by NIH and others.(44,45) Clinical outcomes in melanoma can vary with the sex of the patient, suggesting that this variable is relevant for melanoma research.”
BackgroundRoot, J., Mendsaikhan, A., Taylor, G., Merino, P., Nandy, S., Wang, M., Araujo, L. T., Ryu, D., Holler, C., Thompson, B. M., et al. (2024) · Cell Reports · doi:10.1016/j.celrep.2024.114985 · Cited by 39 · see citing works
- Authors
- Shah, K., McCormack, C. E., & Bradbury, N. A.
- Affiliations
- Rosalind Franklin University of Medicine and Science (US)
- Corresponding author
- Bradbury, Neil A.
- Venue
- American Journal of Physiology-Cell Physiology
- Publisher
- American Physiological Society
- Published
- 2014-01-01
- Volume
- 306
- Issue
- 1
- Pages
- C3-C18
- ISSN
- 0363-6143 (ISSN-L)
- 1522-1563
- PMC
- PMC3919971
- OpenAlex
- W2108937262
- Cited by
- 219
- References
- 8
- Citations by year
- 2026: 9 · 2025: 17 · 2024: 17 · 2023: 16 · 2022: 20 · 2021: 27 · 2020: 28 · 2019: 19 · 2018: 23 · 2017: 17 · 2016: 9 · 2015: 10 · 2014: 6 · 2013: 1
- FWCI
- 1.05
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- American Journal of Physiology-Cell Physiology (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Heart, Lung, and Blood Institute (R01HL102208, HL102208)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
- Health Sciences › Medicine › Public Health, Environmental and Occupational Health › Sex and Gender in Healthcare
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Sexual Differentiation and Disorders
- Keywords
- sex chromosomes, Y chromosome, sex chromosome genes, cell line origin, neurons, kidney cells
- MeSH terms
- Animals, Cell Line, Cell Physiological Phenomena, Female, Humans, Male, Sex Characteristics, X Chromosome, Y Chromosome
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