The DOI matches its Crossref record; 47 of the 48 references it cites were found in a registry or an index.
Mitochondrial DNA mutations in human colonic crypt stem cells
Open accessAbstract
The mitochondrial genome encodes 13 essential subunits of the respiratory chain and has remarkable genetics based on uniparental inheritance. Within human populations, the mitochondrial genome has a high rate of sequence divergence with multiple polymorphic variants and thus has played a major role in examining the evolutionary history of our species. In recent years it has also become apparent that pathogenic mitochondrial DNA (mtDNA) mutations play an important role in neurological and other diseases. Patients harbor many different mtDNA mutations, some of which are mtDNA mutations, some of which are inherited, but others that seem to be sporadic. It has also been suggested that mtDNA mutations play a role in aging and cancer, but the evidence for a causative role in these conditions is less clear. The accumulated data would suggest, however, that mtDNA mutations occur on a frequent basis. In this article we describe a new phenomenon: the accumulation of mtDNA mutations in human colonic crypt stem cells that result in a significant biochemical defect in their progeny. These studies have important consequences not only for understanding of the finding of mtDNA mutations in aging tissues and tumors, but also for determining the frequency of mtDNA mutations within a cell.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“several studies have related mtDNA defects to human stem cell aging100–102.”
From Stem cell aging: mechanisms, regulators and therapeutic opportunities (2014) · cites this paper as [100]
In the citing paper
“Clonal expansion of mtDNA mutations has been described in numerous tissues from aged individuals, such as skeletal muscle (Fayet et al., 2002; Muller-Hocker et al., 1993), substantia nigra neurons (Cottrell et al., 2001; Kraytsberg et al., 2006), heart (Muller-Hocker, 1989) and colonic crypts (Taylor et al., 2003).”
From Role of the mitochondrial DNA replication machinery in mitochondrial DNA mutagenesis, aging and age-related diseases (2017) · cites this paper as Taylor et al., 2003
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA
Andrews, R. M., Kubacka, I., Chinnery, P. F., Lightowlers, R. N., Turnbull, D. M., & Howell, N. (1999) · Nature Genetics · doi:10.1038/13779 · Cited by 3,337
Self-citationMitochondrial free radical generation, oxidative stress, and aging
Cadenas, E., & Davies, K. J. A. (2000) · Free Radical Biology and Medicine · doi:10.1016/s0891-5849(00)00317-8 · Cited by 3,010
Kirkwood, T. B. L., & Austad, S. N. (2000) · Nature · doi:10.1038/35041682 · Cited by 1,774
Self-citationThe Multiple Leiomyoma Consortium (2002) · Nature Genetics · doi:10.1038/ng849 · Cited by 1,635
Germ-Line Mutations in Nonsyndromic Pheochromocytoma
Neumann, H. P. H., Bausch, B., McWhinney, S. R., Bender, B., Gimm, O., Franke, G., Schipper, J., Klisch, J., Altehoefer, C., Zerres, K., et al. (2002) · New England Journal of Medicine · doi:10.1056/nejmoa020152 · Cited by 1,350
Stochastic and genetic factors influence tissue-specific decline in ageing C. elegans
Herndon, L. A., Schmeissner, P. J., Dudaronek, J. M., Brown, P. A., Listner, K. M., Sakano, Y., Paupard, M. C., Hall, D. H., & Driscoll, M. (2002) · Nature · doi:10.1038/nature01135 · Cited by 1,214
MITOCHONDRIAL DNA MAINTENANCE IN VERTEBRATES
Shadel, G. S., & Clayton, D. A. (1997) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.66.1.409 · Cited by 1,059
Somatic mutations of the mitochondrial genome in human colorectal tumours
Polyák, K., Li, Y., Zhu, H., Christoph Lengauer, C., Willson, J. K. V., Markowitz, S. D., Trush, M. A., Kinzler, K. W., & Vogelstein, B. (1998) · Nature Genetics · doi:10.1038/3108 · Cited by 834
Facile Detection of Mitochondrial DNA Mutations in Tumors and Bodily Fluids
Fliss, M., Usadel, H., Caballero, O. L., Wu, L. J., Buta, M. R., Eleff, S. M., Jen, J., & Sidransky, D. (2000) · Science · doi:10.1126/science.287.5460.2017 · Cited by 821
Detection of a specific mitochondrial DNA deletion in tissues of older humans
Cortopassi, G. A., & Arnheim, N. (1990) · Nucleic Acids Research · doi:10.1093/nar/18.23.6927 · Cited by 788
Michikawa, Y., Mazzucchelli, F., Bresolin, N., Scarlato, G., & Attardi, G. M. (1999) · Science · doi:10.1126/science.286.5440.774 · Cited by 724
Zhu, Z., Yao, J., Johns, T., Fu, K., Bie, I. D., Macmillan, C., Cuthbert, A. P., Newbold, R. F., Wang, J., Chevrette, M., et al. (1998) · Nature Genetics · doi:10.1038/3804 · Cited by 620
Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics
Mootha, V. K., Lepage, P., Miller, K., Bunkenborg, J., Reich, M. M., Hjerrild, M., DelMonte, T. A., Villeneuve, A., SLADEK, R. M., Xu, F., et al. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.242716699 · Cited by 585
Papadopoulou, L. C., Sue, C. M., Davidson, M. M., Tanji, K., Nishino, I., Sadlock, J. E., Krishna, S., Walker, W., Selby, J. M., Glerum, D. M., et al. (1999) · Nature Genetics · doi:10.1038/15513 · Cited by 571
Herrnstadt, C., Elson, J. L., Fahy, E., Preston, G., Turnbull, D. M., Anderson, C. M., Ghosh, S. S., Olefsky, J. M., Beal, M. F., Davis, R. E., et al. (2002) · The American Journal of Human Genetics · doi:10.1086/339933 · Cited by 536
Self-citationMutations of SURF-1 in Leigh Disease Associated with Cytochrome c Oxidase Deficiency
Tiranti, V., Hoertnagel, K., Carrozzo, R., Galimberti, C., Munaro, M., Granatiero, M., Zelante, L., Gasparini, P., Marzella, R., Rocchi, M., et al. (1998) · The American Journal of Human Genetics · doi:10.1086/302150 · Cited by 527
Mammalian mitochondrial genetics: heredity, heteroplasmy and disease
Lightowlers, R. N., Chinnery, P. F., Turnbull, D. M., & Howell, N. (1997) · Trends in Genetics · doi:10.1016/s0168-9525(97)01266-3 · Cited by 469
Self-citationExercise Intolerance Due to Mutations in the CytochromebGene of Mitochondrial DNA
Andreu, A. L., Hanna, M. G., Reichmann, H., Bruno, C., Penn, A. S., Tanji, K., Pallotti, F., Iwata, S., Bonilla, E., Lach, B., et al. (1999) · New England Journal of Medicine · doi:10.1056/nejm199909303411404 · Cited by 427
Tissue-specific selection for different mtDNA genotypes in heteroplasmic mice
Jenuth, J. P., Peterson, A. C., & Shoubridge, E. A. (1997) · Nature Genetics · doi:10.1038/ng0597-93 · Cited by 415
Gross, N. J., Getz, G. S., & Rabinowitz, M. (1969) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)91795-3 · Cited by 379
Investigating stem cells in human colon by using methylation patterns
Yatabe, Y., Tavaré, S., & Shibata, D. K. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.191225998 · Cited by 368
Valnot, I., Osmond, S., Gigarel, N., Mehaye, B., Amiel, J., Cormier‐Daire, V., Münnich, A., Bonnefont, J., Rustin, P., & Rötig, A. (2000) · The American Journal of Human Genetics · doi:10.1016/s0002-9297(07)62940-1 · Cited by 349
Random intracellular drift explains the clonal expansion of mitochondrial DNA mutations with age
Elson, J. L., Samuels, D. C., Turnbull, D. M., & Chinnery, P. F. (2001) · The American Journal of Human Genetics · doi:10.1086/318801 · Cited by 340
Self-citationAntonická, H., Mattman, A., Carlson, C. G., Glerum, D. M., Hoffbuhr, K. C., Leary, S. C., Kennaway, N. G., & Shoubridge, E. A. (2003) · The American Journal of Human Genetics · doi:10.1086/345489 · Cited by 324
Detection and quantification of mitochondrial DNA deletions in individual cells by real-time PCR
He, L. (2002) · Nucleic Acids Research · doi:10.1093/nar/gnf067 · Cited by 320
Sciacco, M., Bonilla, E., Schon, E. A., DiMauro, S., & Moraes, C. T. (1994) · Human Molecular Genetics · doi:10.1093/hmg/3.1.13 · Cited by 305
Coller, H. A., Khrapko, K., Bodyak, N. D., Nekhaeva, E., Herrero-Jimenez, P., & Thilly, W. G. (2001) · Nature Genetics · doi:10.1038/88859 · Cited by 288
Brierley, E. J., Johnson, M. A., Lightowlers, R. N., James, O., & Turnbull, D. M. (1998) · Annals of Neurology · doi:10.1002/ana.410430212 · Cited by 282
Self-citationSchmidt, G. H., Winton, D. J., & Ponder, B. A. J. (1988) · Development · doi:10.1242/dev.103.4.785 · Cited by 244
Stem cells: the intestinal stem cell as a paradigm
Bach, S. P., Renehan, A. G., & Potten, C. S. (2000) · Carcinogenesis · doi:10.1093/carcin/21.3.469 · Cited by 236
How rapidly does the human mitochondrial genome evolve?
Howell, N., Kubacka, I., & Mackey, D. A. (1996) · PubMed Central · Cited by 213
The Protein Information Resource: an integrated public resource of functional annotation of proteins
Wu, C. H. (2002) · Nucleic Acids Research · doi:10.1093/nar/30.1.35 · Cited by 212
Clonally expanded mtDNA point mutations are abundant in individual cells of human tissues
Nekhaeva, E., Bodyak, N. D., Kraytsberg, Y., McGrath, S., van Orsouw, N. J., Pluzhnikov, A., Wei, J. Y., Vijg, J., & Khrapko, K. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.072670199 · Cited by 205
Relaxed Replication of mtDNA: A Model with Implications for the Expression of Disease
Chinnery, P. F., & Samuels, D. C. (1999) · The American Journal of Human Genetics · doi:10.1086/302311 · Cited by 200
Self-citationMitochondrial mutational spectra in human cells and tissues
Khrapko, K., Coller, H. A., André, P. C., Li-Sucholeiki, X., Hanekamp, J. S., & Thilly, W. G. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.25.13798 · Cited by 182
Taylor, R. W. (2001) · Nucleic Acids Research · doi:10.1093/nar/29.15.e74 · Cited by 171
Self-citationHirano, M., Shtilbans, A., Mayeux, R. P., Davidson, M. M., DiMauro, S., Knowles, J. A., & Schon, E. A. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.26.14894 · Cited by 133
Tiranti, V. (2000) · Human Molecular Genetics · doi:10.1093/hmg/9.18.2733 · Cited by 123
Heyer, É., Ziętkiewicz, E., Rochowski, A., Yotova, V., Puymirat, J., & Labuda, D. (2001) · The American Journal of Human Genetics · doi:10.1086/324024 · Cited by 110
Murdock, D. G. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.21.4350 · Cited by 110
Shanske, S., Tang, Y., Hirano, M., Nishigaki, Y., Tanji, K., Bonilla, E., Sue, C. M., Krishna, S., Carlo, J., Willner, J. P., et al. (2002) · The American Journal of Human Genetics · doi:10.1086/342482 · Cited by 86
Molecular analysis of cytochromec Oxidase deficiency in Leigh's syndrome
Adams, P. L., Lightowlers, R. N., & Turnbull, D. M. (1997) · Annals of Neurology · doi:10.1002/ana.410410219 · Cited by 82
Self-citationCytochrome c oxidase activity in single muscle fibers: Assay techniques and diagnostic applications
Johnson, M. A., Bindoff, L. A., & Turnbull, D. M. (1993) · Annals of Neurology · doi:10.1002/ana.410330106 · Cited by 49
Self-citationCytochrome oxidase immunohistochemistry: clues for genetic mechanisms
Rahman, S. (2000) · Brain · doi:10.1093/brain/123.3.591 · Cited by 44
A high frequency of mtDNA polymorphisms in HeLa cell sublines
Herrnstadt, C., Preston, G., Andrews, R. M., Chinnery, P. F., Lightowlers, R. N., Turnbull, D. M., Kubacka, I., & Howell, N. (2002) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/s0027-5107(01)00304-9 · Cited by 40
Self-citationMartin, K., Potten, C. S., & Kirkwood, T. B. L. (2000) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.2000.tb06662.x · Cited by 19
Self-citationKhan (2000) · doi:10.1002/1531-8249(200008)48:2
Self-citation
Flagged first, then by citations
1 of the 48 references couldn’t be matched to a known paper.
Research works printed but not linked: 3
- Cortopassi, 1990, Nucleic Acids Res., 275, 169
- Howell, 1996, Am. J. Hum. Genet., 59, 501
- Valnot, 2000, Am. J. Hum. Genet., 67, 1104
Cited by
Sorted by citations
Frailty in relation to the accumulation of deficits
Rockwood, K., & Mitnitski, A. (2007) · The Journals of Gerontology Series A: Biological Sciences and Medical Sciences · doi:10.1093/gerona/62.7.722 · Cited by 3,076
Regev, A., Teichmann, S. A., Lander, E. S., Amit, I., Benoist, C., Birney, E., Bodenmiller, B., Campbell, P., Carninci, P., Clatworthy, M., et al. (2017) · eLife · doi:10.7554/elife.27041 · Cited by 2,232
Understanding the odd science of aging
Kirkwood, T. B. L. (2005) · Cell · doi:10.1016/j.cell.2005.01.027 · Cited by 1,984
Self-citationStem Cells, Self-Renewal, and Differentiation in the Intestinal Epithelium
van der Flier, L. G., & Clevers, H. C. (2008) · Annual Review of Physiology · doi:10.1146/annurev.physiol.010908.163145 · Cited by 1,994
Mitochondrial DNA mutations in human disease
Taylor, R. W., & Turnbull, D. M. (2005) · Nature Reviews Genetics · doi:10.1038/nrg1606 · Cited by 1,922
Self-citation
Metadata
- Authors
- Taylor, R. W., Barron, M. J., Borthwick, G. M., Gospel, A., Chinnery, P. F., Samuels, D. C., Taylor, G. A., Plusa, S. M., Needham, S. J., Greaves, L. C., Kirkwood, T. B. L., & Turnbull, D. M.
- Affiliations
- Newcastle University (GB)
- Corresponding author
- Turnbull, Douglass M.
- ORCID
- Venue
- Journal of Clinical Investigation
- Published
- 2003-11-01
- Volume
- 112
- Issue
- 9
- Pages
- 1351-1360
- ISSN
- 0021-9738 (ISSN-L)
- PMC
- PMC228466
- OpenAlex
- W2158615962
- Cited by
- 530
- References
- 48
- Citations by year
- 2026: 8 · 2025: 11 · 2024: 12 · 2023: 14 · 2022: 15 · 2021: 20 · 2020: 23 · 2019: 13 · 2018: 17 · 2017: 18 · 2016: 25 · 2015: 16 · 2014: 40 · 2013: 25 · 2012: 23
- FWCI
- 8.62
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Journal of Clinical Investigation (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Newcastle University ePrints (Newcastle Univesity)
- Funders
- Wellcome Trust
- Cancer Research UK
- Medical Research Council
- Biotechnology and Biological Sciences Research Council (BEP17 042)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Forensic and Genetic Research
- Health Sciences › Medicine › Pathology and Forensic Medicine › Genetic factors in colorectal cancer
- Keywords
- mitochondrial DNA mutations, mitochondrial genome, electron transport chain, uniparental inheritance, mtDNA polymorphisms, aging, cancer, mutation frequency
- MeSH terms
- Aged, Aged, 80 and over, Colon, DNA Replication, DNA, Mitochondrial, Electron Transport, Humans, Mathematics, Middle Aged, Models, Genetic, Mutation, Stem Cells
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review