DAVID: Database for Annotation, Visualization, and Integrated Discovery

Gene Ontology: tool for the unification of biology

Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P., Dolinski, K., Dwight, S. S., Eppig, J. T., et al. (2000) · Nature Genetics · doi:10.1038/75556 · Cited by 43,206

KEGG: Kyoto Encyclopedia of Genes and Genomes

Kanehisa, M. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.1.27 · Cited by 37,077

KEGG: Kyoto Encyclopedia of Genes and Genomes

Ogata, H., Goto, S., Sato, K., Fujibuchi, W., Bono, H., & Kanehisa, M. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.1.29 · Cited by 31,232

Database resources of the National Center for Biotechnology Information: update

Wheeler, D. L. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkh073 · Cited by 10,695

Identifying biological themes within lists of genes with EASE

Hosack, D. A., Dennis, G., Sherman, B. T., Lane, H. C., & Lempicki, R. A. (2003) · Genome biology · doi:10.1186/gb-2003-4-10-r70 · Cited by 1,961

The Ensembl genome database project

Hubbard, T. (2002) · Nucleic Acids Research · doi:10.1093/nar/30.1.38 · Cited by 1,610

Computational analysis of microarray data

Quackenbush, J. (2001) · Nature Reviews Genetics · doi:10.1038/35076576 · Cited by 1,481

Database resources of the National Center for Biotechnology Information

Wheeler, D. L. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.1.10 · Cited by 583

GeneCards: a novel functional genomics compendium with automated data mining and query reformulation support.

Rebhan, M., Caspi, V. C., Prilusky, J., & Lancet, D. (1998) · Bioinformatics · doi:10.1093/bioinformatics/14.8.656 · Cited by 502

NetAffx: Affymetrix probesets and annotations

Liu, G. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg121 · Cited by 487

H3K4 demethylation by Jarid1a and Jarid1b contributes to retinoblastoma-mediated gene silencing during cellular senescence

Chicas, A., Kapoor, A., Wang, X., Aksoy, O., Evertts, A. G., Zhang, M. Q., Garcia, B. A., Bernstein, E., & Lowe, S. W. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1119836109 · Cited by 162

Genomic analysis of sleep deprivation reveals translational regulation in the hippocampus

Vecsey, C. G., Peixoto, L., Choi, J. H. K., Wimmer, M. E., Jaganath, D., Hernandez, P. J., Blackwell, J. M., Meda, K., Park, A. J., Hannenhalli, S. S., et al. (2012) · Physiological Genomics · doi:10.1152/physiolgenomics.00084.2012 · Cited by 167

The landscape of RNA Pol II binding reveals a stepwise transition during ZGA

Liu, B., Xu, Q., Wang, Q., Su, F., Lai, F.-N., Wang, P., Zheng, F., Xiang, Y., Wu, J., Nie, J., et al. (2020) · Nature · doi:10.1038/s41586-020-2847-y · Cited by 165

Transcription factor p63 bookmarks and regulates dynamic enhancers during epidermal differentiation

Kouwenhoven, E. N., Oti, M., Niehues, H., van Heeringen, S. J., Schalkwijk, J., Stunnenberg, H. G., van Bokhoven, H., & Zhou, H. (2015) · EMBO Reports · doi:10.15252/embr.201439941 · Cited by 165

Notch Initiates the Endothelial-to-Mesenchymal Transition in the Atrioventricular Canal through Autocrine Activation of Soluble Guanylyl Cyclase

Chang, A. C. Y., Fu, Y., Garside, V. C., Niessen, K. S., Chang, L., Fuller, M., Setiadi, A., Smrz, J., Kyle, A. H., Minchinton, A. I., et al. (2011) · Developmental Cell · doi:10.1016/j.devcel.2011.06.022 · Cited by 166

Genome-wide assessment of differential roles for p300 and CBP in transcription regulation

Ramos, Y. F., Hestand, M. S., Verlaan, M., Krabbendam, E., Ariyürek, Y., van Galen, M., van Dam, H., van Ommen, G. B., den Dunnen, J. T., ZANTEMA, A., et al. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq184 · Cited by 166

Response and survival of breast cancer intrinsic subtypes following multi-agent neoadjuvant chemotherapy

Prat, A., Fan, C., Fernández-Martínez, A., Hoadley, K. A., Martinello, R., Vidal, M. J., Viladot, M., Pineda, E., Arance, A. M., Muñoz-Mateu, M., et al. (2015) · BMC Medicine · doi:10.1186/s12916-015-0540-z · Cited by 164

Zebrafish miR-1 and miR-133 shape muscle gene expression and regulate sarcomeric actin organizationPreprint

Mishima, Y., Abreu‐Goodger, C., Staton, A. A., Stahlhut, C. E., Shou, C., Cheng, C., Gerstein, M., Enright, A. J., & Giráldez, A. J. (2009) · Genes & Development · doi:10.1101/gad.1760209 · Cited by 165

Network-Based Multiple Sclerosis Pathway Analysis with GWAS Data from 15,000 Cases and 30,000 Controls

Baranzini, S. E., Khankhanian, P., Patsopoulos, N. A., Li, M., Stankovich, J. M., Cotsapas, C. J., Søndergaard, H. B., Ban, M., Barizzone, N., Bergamaschi, L., et al. (2013) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2013.04.019 · Cited by 162

Mitotic retention of gene expression patterns by the cell fate-determining transcription factor Runx2

Young, D. W., Hassan, M. Q., Yang, X., Galindo, M. A., Javed, A., Zaidi, S. K., Furcinitti, P. S., Lapointe, D. S., Montecino, M. A., Lian, J. B., et al. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0611419104 · Cited by 162

Genome-wide DNA methylation analysis in dermal fibroblasts from patients with diffuse and limited systemic sclerosis reveals common and subset-specific DNA methylation aberrancies

Altorok, N., Tsou, P., Coit, P., Khanna, D., & Sawalha, A. H. (2014) · Annals of the Rheumatic Diseases · doi:10.1136/annrheumdis-2014-205303 · Cited by 162

Polycomb preferentially targets stalled promoters of coding and noncoding transcriptsPreprint

Enderle, D., Beisel, C., Stadler, M. B., Gerstung, M., Athri, P., & Paro, R. (2010) · Genome Research · doi:10.1101/gr.114348.110 · Cited by 162

Estrogen Receptor α Controls a Gene Network in Luminal-Like Breast Cancer Cells Comprising Multiple Transcription Factors and MicroRNAs

Cicatiello, L., Mutarelli, M., Grober, O. M. V., Paris, O., Ferraro, L., Ravo, M., Tarallo, R., Luo, S. J., Schroth, G. P., Seifert, M., et al. (2010) · American Journal Of Pathology · doi:10.2353/ajpath.2010.090837 · Cited by 163

Regulation of liver regeneration and hepatocarcinogenesis by suppressor of cytokine signaling 3

Riehle, K. J., Campbell, J. S., McMahan, R. S., Johnson, M. M., Beyer, R. P., Bammler, T. K., & Fausto, N. (2008) · The Journal of Experimental Medicine · doi:10.1084/jem.20070820 · Cited by 161

ConceptGen: a gene set enrichment and gene set relation mapping tool

Sartor, M. A., Mahavisno, V., Keshamouni, V. G., Cavalcoli, J. D., Wright, Z., Karnovsky, A., Kuick, R. D., Jagadish, H. V., Mirel, B., Weymouth, T. E., et al. (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp683 · Cited by 159

Epigenetic regulation of the circadian gene Per1 contributes to age-related changes in hippocampal memory

Kwapis, J. L., Alaghband, Y., Kramár, E. A., López, A. J., Ciernia, A. V., White, A. O., Shu, G., Rhee, D., Michael, C. M., Montellier, E., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-05868-0 · Cited by 175

Integrative analysis of DNA methylation and gene expression identified cervical cancer-specific diagnostic biomarkers

Xu, W., Xu, M., Wang, L., Zhou, W., Xiang, R., Shi, Y., Zhang, Y., & Piao, Y. (2019) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-019-0081-6 · Cited by 170

Mapping the genetic architecture of human traits to cell types in the kidney identifies mechanisms of disease and potential treatments

Sheng, X., Guan, Y., Ma, Z., Wu, J., Liu, H., Qiu, C., Vitale, S., Miao, Z., Seasock, M. J., Palmer, M., et al. (2021) · Nature Genetics · doi:10.1038/s41588-021-00909-9 · Cited by 163

Ras Inhibition in Glioblastoma Down-regulates Hypoxia-Inducible Factor-1α, Causing Glycolysis Shutdown and Cell Death

Blum, R., Jacob‐Hirsch, J., Amariglio, N., Rechavi, G., & Kloog, Y. (2005) · Cancer Research · doi:10.1158/0008-5472.999.65.3 · Cited by 190

ATF3, an adaptive-response gene, enhances TGFβ signaling and cancer-initiating cell features in breast cancer cells

Yin, X. H., Wolford, C. C., Chang, Y.-S., McConoughey, S. J., Ramsey, S. A., Aderem, A. A., & Hai, T. (2010) · Journal of Cell Science · doi:10.1242/jcs.064915 · Cited by 163

Divergent Whole-Genome Methylation Maps of Human and Chimpanzee Brains Reveal Epigenetic Basis of Human Regulatory Evolution

Zeng, J., Konopka, G., Hunt, B. G., Preuss, T. M., Geschwind, D. H., & Yi, S. V. (2012) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2012.07.024 · Cited by 167

Hopx and Hdac2 Interact to Modulate Gata4 Acetylation and Embryonic Cardiac Myocyte Proliferation

Trivedi, C. M., Zhu, W., Wang, Q., Jia, C., Kee, H. J., Li, L., Hannenhalli, S. S., & Epstein, J. A. (2010) · Developmental Cell · doi:10.1016/j.devcel.2010.08.012 · Cited by 160

Constraints, independence, and evolution of thermal plasticity: Probing genetic architecture of long- and short-term thermal acclimation

Gerken, A. R., Eller, O. C., Hahn, D. A., & Morgan, T. J. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1503456112 · Cited by 153

Chemical Genomics Identifies the Unfolded Protein Response as a Target for Selective Cancer Cell Killing during Glucose Deprivation

Saito, S., Furuno, A., Sakurai, J., Sakamoto, A., Park, H.-R., Shin‐ya, K., Tsuruo, T., & Tomida, A. (2009) · Cancer Research · doi:10.1158/0008-5472.can-08-2689 · Cited by 164

Dietary Restriction Extends Lifespan through Metabolic Regulation of Innate Immunity

Wu, Z., Isik, M., Moroz, N., Steinbaugh, M. J., Zhang, P., & Blackwell, T. K. (2019) · Cell Metabolism · doi:10.1016/j.cmet.2019.02.013 · Cited by 163

Multi-omics discovery of exome-derived neoantigens in hepatocellular carcinoma

Loeffler, M. W., Mohr, C., Bichmann, L., Freudenmann, L. K., Walzer, M., Schroeder, C., Trautwein, N., Hilke, F. J., Zinser, R. S., Mühlenbruch, L., et al. (2019) · Genome Medicine · doi:10.1186/s13073-019-0636-8 · Cited by 157

Proteomic Profiling of Extracellular Vesicles Derived from Cerebrospinal Fluid of Alzheimer’s Disease Patients: A Pilot Study

Muraoka, S., Jedrychowski, M. P., Yanamandra, K., Ikezu, S., Gygi, S. P., & Ikezu, T. (2020) · Cells · doi:10.3390/cells9091959 · Cited by 162

Gene expression profile in the muscles of patients with inflammatory myopathies: effect of therapy with IVIg and biological validation of clinically relevant genes

Raju, R. P., & Dalakas, M. C. (2005) · Brain · doi:10.1093/brain/awh518 · Cited by 160

Sex-specific pathways in early cardiac response to pressure overload in mice

Witt, H., Schubert, C., Jaekel, J., Fliegner, D., Penkalla, A., Tiemann, K., Stypmann, J., Roepcke, S., Brokat, S., Mahmoodzadeh, S., et al. (2008) · Journal of Molecular Medicine · doi:10.1007/s00109-008-0385-4 · Cited by 159

Complement Protein C1q-Mediated Neuroprotection Is Correlated with Regulation of Neuronal Gene and MicroRNA Expression

Benoit, M. E., & Tenner, A. J. (2011) · Journal of Neuroscience · doi:10.1523/jneurosci.3932-10.2011 · Cited by 163

Enhancing the Prioritization of Disease-Causing Genes through Tissue Specific Protein Interaction Networks

Magger, O., Waldman, Y. Y., Ruppin, E., & Sharan, R. (2012) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1002690 · Cited by 158

ERdj4 and ERdj5 Are Required for Endoplasmic Reticulum-associated Protein Degradation of Misfolded Surfactant Protein C

Dong, M., Bridges, J. P., Apsley, K. S., Xu, Y. J., & Weaver, T. E. (2008) · Molecular Biology of the Cell · doi:10.1091/mbc.e07-07-0674 · Cited by 159

Molecular signatures of maturing dendritic cells: implications for testing the quality of dendritic cell therapies

Jin, P., Han, T. H., Ren, J., Saunders, S. S., Wang, E., Marincola, F. M., & Stroncek, D. F. (2010) · Journal of Translational Medicine · doi:10.1186/1479-5876-8-4 · Cited by 159

Gene expression in the human mammary epithelium during lactation: the milk fat globule transcriptome

Maningat, P. D., Sen, P., Rijnkels, M., Sunehag, A. L., Hadsell, D. L., Bray, M. S., & Haymond, M. W. (2008) · Physiological Genomics · doi:10.1152/physiolgenomics.90341.2008 · Cited by 159

Recurrent internal tandem duplications of BCOR in clear cell sarcoma of the kidney

Roy, A., Kumar, V., Zorman, B., Fang, E., Haines, K. M., Doddapaneni, H., Hampton, O. A., White, S. J., Bavle, A. A., Patel, N. R., et al. (2015) · Nature Communications · doi:10.1038/ncomms9891 · Cited by 161

Systematic analysis of binding of transcription factors to noncoding variants

Yan, J., Qiu, Y., dos Santos, A. M. R., Yin, Y., Li, Y. E., Vinckier, N., Nariai, N., Benaglio, P., Raman, A., Li, X., et al. (2021) · Nature · doi:10.1038/s41586-021-03211-0 · Cited by 163

Identification of Genes Selectively Regulated by IFNs in Endothelial Cells

Indraccolo, S., Pfeffer, U., Minuzzo, S. A., Esposito, G., Roni, V., Mandruzzato, S., Ferrari, N., Anfosso, L., Dell’Eva, R., Noonan, D. M., et al. (2007) · The Journal of Immunology · doi:10.4049/jimmunol.178.2.1122 · Cited by 158

Gene Expression Profiling of Lymphoblasts from Autistic and Nonaffected Sib Pairs: Altered Pathways in Neuronal Development and Steroid Biosynthesis

Hu, V. W., Nguyen, A., Kim, K. S., Lowe, M. S., Sarachana, T., Scully, M. A., Soldin, S. J., Luu, T. V., & Lee, N. H. (2009) · PLoS ONE · doi:10.1371/journal.pone.0005775 · Cited by 161

A Genome Scan for Positive Selection in Thoroughbred Horses

Gu, J., Orr, N., Park, S. D., Katz, L. M., Сулимова, Г. Е., MacHugh, D. E., & Hill, E. W. (2009) · PLoS ONE · doi:10.1371/journal.pone.0005767 · Cited by 160

Unravelling the enigma of selective vulnerability in neurodegeneration: motor neurons resistant to degeneration in ALS show distinct gene expression characteristics and decreased susceptibility to excitotoxicity

Brockington, A., Ning, K., Heath, P. R., Wood, E., Kirby, J., Fusi, N., Lawrence, N. D., Wharton, S. B., Ince, P. G., & Shaw, P. J. (2012) · Acta Neuropathologica · doi:10.1007/s00401-012-1058-5 · Cited by 163

Oxidative Stress: Emerging Mitochondrial and Cellular Themes and Variations in Neuronal Injury

Higgins, G. C., Beart, P. M., Shin, Y. S., Chen, M. J., Cheung, N. S., & Nagley, P. (2010) · Journal of Alzheimer s Disease · doi:10.3233/jad-2010-100321 · Cited by 160

Stress, novel sex genes, and epigenetic reprogramming orchestrate socially controlled sex change

Todd, E. V., Ortega‐Recalde, O., Liu, H., Lamm, M. S., Rutherford, K., Cross, H., Black, M. A., Kardailsky, O., Graves, J. A. M., Hore, T. A., et al. (2019) · Science Advances · doi:10.1126/sciadv.aaw7006 · Cited by 163

Gene Expression Profiling of Sporadic Parkinson's Disease Substantia Nigra Pars Compacta Reveals Impairment of Ubiquitin-Proteasome Subunits, SKP1A, Aldehyde Dehydrogenase, and Chaperone HSC-70

Mandel, S. A., Grünblatt, E., Riederer, P. F., Amariglio, N., Hirsch, J. J., Rechavi, G., & Youdim, M. B. H. (2005) · Annals of the New York Academy of Sciences · doi:10.1196/annals.1344.031 · Cited by 163

Bioinformatic Analysis of Circadian Gene Oscillation in Mouse Aorta

Rudic, R. D., McNamara, P., Reilly, D., Grosser, T., Curtis, A.-M., Price, T. S., Panda, S., Hogenesch, J. B., & FitzGerald, G. A. (2005) · Circulation · doi:10.1161/circulationaha.105.568626 · Cited by 157

Release of Severe Acute Respiratory Syndrome Coronavirus Nuclear Import Block Enhances Host Transcription in Human Lung Cells

Sims, A. M., Tilton, S. C., Menachery, V. D., Gralinski, L. E., Schäfer, A., Matzke, M. M., Webb‐Robertson, B., Chang, J., Luna, M. L., Long, C., et al. (2013) · Journal of Virology · doi:10.1128/jvi.02520-12 · Cited by 156

Molecular Distinctions between Stasis and Telomere Attrition Senescence Barriers Shown by Long-term Culture of Normal Human Mammary Epithelial Cells

Garbe, J. C., Bhattacharya, S., Merchant, B., Bassett, E., Swisshelm, K. L., Feiler, H. S., Wyrobek, A. J., & Stampfer, M. R. (2009) · Cancer Research · doi:10.1158/0008-5472.can-09-0270 · Cited by 160

Abnormal p38 mitogen-activated protein kinase signaling in dilated cardiomyopathy caused by lamin A/C gene mutation

Muchir, A., Wu, W. E., Choi, J. C., Iwata, S., Morrow, J., Homma, S., & Worman, H. J. (2012) · Human Molecular Genetics · doi:10.1093/hmg/dds265 · Cited by 157

Gene expression in Huntington's disease skeletal muscle: a potential biomarker

Strand, A. D., Aragaki, A. K., Shaw, D., Bird, T. D., Holton, J. L., Turner, C., Tapscott, S. J., Tabrizi, S. J., Schapira, A. H. V., Kooperberg, C. L., et al. (2005) · Human Molecular Genetics · doi:10.1093/hmg/ddi192 · Cited by 160

Impaired Notch Signaling Leads to a Decrease in p53 Activity and Mitotic Catastrophe in Aged Muscle Stem Cells

Liu, L., Charville, G. W., Cheung, T. H., Yoo, B., Santos, P. J., Schroeder, M., & Rando, T. A. (2018) · Cell Stem Cell · doi:10.1016/j.stem.2018.08.019 · Cited by 156

Identifier mapping performance for integrating transcriptomics and proteomics experimental results

Day, R., McDade, K. K., Chandran, U. R., Lisovich, A., Conrads, T. P., Hood, B. L., Kolli, V. S. K., Kirchner, D. R., Litzi, T., & Maxwell, G. L. (2011) · BMC Bioinformatics · doi:10.1186/1471-2105-12-213 · Cited by 156

Serum microRNA array analysis identifies miR-140-3p, miR-33b-3p and miR-671-3p as potential osteoarthritis biomarkers involved in metabolic processes

Ntoumou, E., Tzetis, M., Braoudaki, M., Lambrou, G. Ι., Poulou, M., Malizos, Κ. Ν., Stefanou, N., Anastasopoulou, L., & Tsezou, A. (2017) · Clinical Epigenetics · doi:10.1186/s13148-017-0428-1 · Cited by 156

DNA Methylation and Gene Expression Changes in Monozygotic Twins Discordant for Psoriasis: Identification of Epigenetically Dysregulated Genes

Gervin, K., Vigeland, M. D., Mattingsdal, M., Hammerø, M., Nygård, H., Olsen, A. O., Brandt, I., Harris, J. R., Undlien, D. E., & Lyle, R. (2012) · PLoS Genetics · doi:10.1371/journal.pgen.1002454 · Cited by 155

The CrebA/Creb3-like transcription factors are major and direct regulators of secretory capacity

Fox, R. M., Hanlon, C. D., & Andrew, D. J. (2010) · The Journal of Cell Biology · doi:10.1083/jcb.201004062 · Cited by 155

Connecting omics signatures and revealing biological mechanisms with iLINCS

Pilarczyk, M., Fazel‐Najafabadi, M., Kouril, M., Shamsaei, B., Vasiliauskas, J., Niu, W., Mahi, N. A., Zhang, L., Clark, N. A., Ren, Y., et al. (2022) · Nature Communications · doi:10.1038/s41467-022-32205-3 · Cited by 154

Hippocampal and Cognitive Aging across the Lifespan: A Bioenergetic Shift Precedes and Increased Cholesterol Trafficking Parallels Memory Impairment

Kadish, I., Thibault, O., Blalock, E. M., Chen, K.-C., Gant, J. C., Porter, N. M., & Landfield, P. W. (2009) · Journal of Neuroscience · doi:10.1523/jneurosci.4599-08.2009 · Cited by 155

FSH and FOXO1 Regulate Genes in the Sterol/Steroid and Lipid Biosynthetic Pathways in Granulosa Cells

Liu, Z., Rudd, M. D., Hernandez-Gonzalez, I., González, I., Fan, H., Zeleznik, A. J., & Richards, J. S. (2009) · Molecular Endocrinology · doi:10.1210/me.2008-0412 · Cited by 154

Relationship between Gene Body DNA Methylation and Intragenic H3K9me3 and H3K36me3 Chromatin Marks

Hahn, M. A., Wu, X., Li, A. X., Hahn, T., & Pfeifer, G. P. (2011) · PLoS ONE · doi:10.1371/journal.pone.0018844 · Cited by 161

Inhibition of Growth and Metastasis of Mouse Mammary Carcinoma by Selective Inhibitor of Transforming Growth Factor-β Type I Receptor Kinase In vivo

Ge, R., Rajeev, V., Ray, P., Lattime, E. C., Rittling, S. R., Medicherla, S., Protter, A., Murphy, A., Chakravarty, J., Dugar, S., et al. (2006) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-06-0162 · Cited by 155

iBAG: integrative Bayesian analysis of high-dimensional multiplatform genomics data

Wang, W., Baladandayuthapani, V., Morris, J. S., Broom, B. M., Manyam, G. C., & Do, K.-A. (2012) · Bioinformatics · doi:10.1093/bioinformatics/bts655 · Cited by 154

The roles of binding site arrangement and combinatorial targeting in microRNA repression of gene expression

Hon, L., & Zhang, Z. (2007) · Genome biology · doi:10.1186/gb-2007-8-8-r166 · Cited by 157

Gene expression profiles of AML derived stem cells; similarity to hematopoietic stem cells

Gal, H., Amariglio, N., Trakhtenbrot, L., Jacob‐Hirsch, J., Margalit, O., Avigdor, A., Nagler, A., Tavor, S., Ein‐Dor, L., Lapidot, T., et al. (2006) · Leukemia · doi:10.1038/sj.leu.2404401 · Cited by 159

Genome-wide association study of sleep in Drosophila melanogaster

Harbison, S. T., McCoy, L. J., & Mackay, T. F. C. (2013) · BMC Genomics · doi:10.1186/1471-2164-14-281 · Cited by 159

Candida albicans Infection of Caenorhabditis elegans Induces Antifungal Immune Defenses

Pukkila-Worley, R., Ausubel, F. M., & Mylonakis, E. E. (2011) · PLoS Pathogens · doi:10.1371/journal.ppat.1002074 · Cited by 154

Mutant p53R175H upregulates Twist1 expression and promotes epithelial–mesenchymal transition in immortalized prostate cells

Kogan-Sakin, I., Tabach, Y., Buganim, Y., Molchadsky, A., Solomon, H., Madar, S., Kamer, I., Stambolsky, P., Shelly, A., Goldfinger, N., et al. (2010) · Cell Death and Differentiation · doi:10.1038/cdd.2010.94 · Cited by 161

Characterization of Dental Pulp Stem Cells of Human Tooth Germs

Takeda, T., Tezuka, Y., Horiuchi, M., Hosono, K., Iida, K., Hatakeyama, D., Miyaki, S., Kunisada, T., Shibata, T., & Tezuka, K. (2008) · Journal of Dental Research · doi:10.1177/154405910808700716 · Cited by 153

Quantification of Extracellular Matrix Proteins from a Rat Lung Scaffold to Provide a Molecular Readout for Tissue Engineering

Hill, R. C., Calle, E. A., Dzieciątkowska, M., Niklason, L. E., & Hansen, K. C. (2015) · Molecular & Cellular Proteomics · doi:10.1074/mcp.m114.045260 · Cited by 153

Foxl1-Cre-marked adult hepatic progenitors have clonogenic and bilineage differentiation potentialPreprint

Shin, S., Walton, G., Aoki, R., Brondell, K., Schug, J., Fox, A., Smirnova, O., Dorrell, C., Erker, L. R., Chu, A. S., et al. (2011) · Genes & Development · doi:10.1101/gad.2027811 · Cited by 153

Autoantibodies Against the Exocrine Pancreas in Autoimmune Pancreatitis: Gene and Protein Expression Profiling and Immunoassays Identify Pancreatic Enzymes as a Major Target of the Inflammatory Process

Löhr, M. J., Faissner, R., Koczan, D., Bewerunge, P., Bassi, C., Brors, B., Eils, R., Frulloni, L., Funk, A., Halangk, W., et al. (2010) · The American Journal of Gastroenterology · doi:10.1038/ajg.2010.141 · Cited by 152

Wide-ranging functions of E2F4 in transcriptional activation and repression revealed by genome-wide analysis

Lee, B., Bhinge, A., & Iyer, V. R. (2011) · Nucleic Acids Research · doi:10.1093/nar/gkq1313 · Cited by 157

Cell-Surface Proteomics Identifies Lineage-Specific Markers of Embryo-Derived Stem Cells

Rugg‐Gunn, P. J., Cox, B., Lanner, F., Sharma, P., Ignatchenko, V., McDonald, A., Garner, J., Gramolini, A. O., Rossant, J., & Kislinger, T. (2012) · Developmental Cell · doi:10.1016/j.devcel.2012.01.005 · Cited by 146

A two-parameter generalized Poisson model to improve the analysis of RNA-seq data

Srivastava, S., & Chen, L. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq670 · Cited by 161

p53‐repressed miRNAs are involved with E2F in a feed‐forward loop promoting proliferation

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