The DOI matches its Crossref record; 7 of the 7 references it cites were found in a registry or an index.
Transcriptional Profiling
Abstract
Arabidopsis (rockcress) is a genus in the family Brassicaceae. Representatives of Brassicaceae family are small-flowering plants, some of them are important crops such as cabbage, cauliflower, radish, and canola. Arabidopsis genus includes nine species and eight subspecies. The subspecies delimitation is quite recent, and is based on morphological and molecular phylogenetics (Elizabeth 2000). Arabidopsis thaliana commonly known as thale cress, has 10 chromosomes in diploid stage and was the first plant to have its entire genome sequenced. Most of the species in Arabidopsis are indigenous to Europe and only two species are found in North America and Asia.
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Citations
Cites
Bartel (2004) · doi:10.1016/s0092-8674(04)00045-5 · Cited by 34,714
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
Initiative, T. A. G. (2000) · Nature · doi:10.1038/35048692 · Cited by 9,301
Ketting, R. F., Fischer, S. E. J., Bernstein, E., Sijen, T., Hannon, G. J., & Plasterk, R. H. A. (2001) · Genes & Development · doi:10.1101/gad.927801 · Cited by 1,852
Cleavage of Scarecrow-like mRNA Targets Directed by a Class of Arabidopsis miRNA
Llave, C., Xie, Z., Kasschau, K. D., & Carrington, J. C. (2002) · Science · doi:10.1126/science.1076311 · Cited by 1,627
Using the transcriptome to annotate the genome
Saha, S., Sparks, A. B., Rago, C., Akmaev, V., Wang, C. J., Vogelstein, B., Kinzler, K. W., & Velculescu, V. E. (2002) · Nature Biotechnology · doi:10.1038/nbt0502-508 · Cited by 630
The ABC’s of comparative genomics in the Brassicaceae: building blocks of crucifer genomes
Schranz, M. E., Lysak, M. A., & Mitchell-Olds, T. (2006) · Trends in Plant Science · doi:10.1016/j.tplants.2006.09.002 · Cited by 575
SNP discovery via 454 transcriptome sequencing
Barbazuk, W. B., Emrich, S. J., Chen, H. D., Li, L., & Schnable, P. S. (2007) · The Plant Journal · doi:10.1111/j.1365-313x.2007.03193.x · Cited by 405
Cited by
The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
Hu, T. T., Pattyn, P., Bakker, E. G., Cao, J., Cheng, J.-F., Clark, R. M., Fahlgren, N., Fawcett, J. A., Grimwood, J., Gundlach, H., et al. (2011) · Nature Genetics · doi:10.1038/ng.807 · Cited by 872
The Sol Genomics Network (SGN)—from genotype to phenotype to breeding
Fernandez-Pozo, N., Menda, N., Edwards, J. D., Saha, S., Tecle, I. Y., Strickler, S. R., Bombarely, A., Fisher-York, T., Pujar, A., Foerster, H., et al. (2015) · Nucleic Acids Research · doi:10.1093/nar/gku1195 · Cited by 710
Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids
Ni, Z., Kim, E.-D., Ha, M., Lackey, E., Liu, J., Zhang, Y., Sun, Q., & Chen, Z. J. (2009) · Nature · doi:10.1038/nature07523 · Cited by 677
A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.)
Jain, M., Misra, G., Patel, R. K., Priya, P., Jhanwar, S., Khan, A. W., Shah, N., Singh, V. K., Garg, R., Jeena, G., et al. (2013) · The Plant Journal · doi:10.1111/tpj.12173 · Cited by 406
Selective epigenetic control of retrotransposition in Arabidopsis
Mirouze, M., Reinders, J., Bucher, E., Nishimura, T., Schneeberger, K., Ossowski, S., Cao, J., Weigel, D., Paszkowski, J., & Mathieu, O. (2009) · Nature · doi:10.1038/nature08328 · Cited by 351
Metadata
- Authors
- Zwenger, S., & Basu, C.
- Venue
- Principles and Practices of Plant Genomics, Volume 3
- Publisher
- Science Publishers
- Published
- 2010-08-25
- Pages
- 424-446
- OpenAlex
- W2482833590
- Cited by
- 951
- References
- 7
- FWCI
- 269.95
- Type
- book chapter
- Language
- en
- Open access
- closed
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- Zwenger, S., & Basu, C. (2010). Transcriptional Profiling. Principles and Practices of Plant Genomics, Volume 3. https://doi.org/10.1201/9781439845523-14
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
