Bacterial population in intestines of the Black Tiger Shrimp (Penaeus monodon) under different growth stages

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

Schloss, P. D., Westcott, S. L., Ryabin, T., Hall, J. R., Hartmann, M., Hollister, E. B., Lesniewski, R. A., Oakley, B. B., Parks, D. H., Robinson, C. J., et al. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.01541-09 · Cited by 20,966 · see citing works

Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy

Wang, Q., Garrity, G. M., Tiedje, J. M., & Cole, J. R. (2007) · Applied and Environmental Microbiology · doi:10.1128/aem.00062-07 · Cited by 19,770 · see citing works

UCHIME improves sensitivity and speed of chimera detection

Edgar, R. C., Haas, B. J., Clemente, J. C., Quince, C., & Knight, R. (2011) · Bioinformatics · doi:10.1093/bioinformatics/btr381 · Cited by 15,114 · see citing works

Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA

Muyzer, G., de Waal, E. C., & Uitterlinden, A. G. (1993) · Applied and Environmental Microbiology · doi:10.1128/aem.59.3.695-700.1993 · Cited by 11,455 · see citing works

Genome sequencing in microfabricated high-density picolitre reactors

Margulies, M., Egholm, M., Altman, W. E., Attiya, S., Bader, J. S., Bemben, L. A., Berka, J., Braverman, M. S., Chen, Y.-J., Chen, Z., et al. (2005) · Nature · doi:10.1038/nature03959 · Cited by 7,693 · see citing works

Host-Bacterial Mutualism in the Human Intestine

Bäckhed, F., Ley, R. E., Sonnenburg, J. L., Peterson, D. A., & Gordon, J. I. (2005) · Science · doi:10.1126/science.1104816 · Cited by 5,277 · see citing works

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

Lauber, C. L., Hamady, M., Knight, R., & Fierer, N. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.00335-09 · Cited by 4,063 · see citing works

Microbial diversity in the deep sea and the underexplored “rare biosphere”

Sogin, M. L., Morrison, H. G., Huber, J. A., Welch, D. B. M., Huse, S. M., Neal, P. R., Arrieta, J. M., & Herndl, G. J. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0605127103 · Cited by 3,683 · see citing works

THE POPULATION FREQUENCIES OF SPECIES AND THE ESTIMATION OF POPULATION PARAMETERS

Good, I. J. (1953) · Biometrika · doi:10.1093/biomet/40.3-4.237 · Cited by 3,427 · see citing works

Ecological and Evolutionary Forces Shaping Microbial Diversity in the Human Intestine

Ley, R. E., Peterson, D. A., & Gordon, J. I. (2006) · Cell · doi:10.1016/j.cell.2006.02.017 · Cited by 3,358 · see citing works

MEGAN analysis of metagenomic dataPreprint

Huson, D. H., Auch, A. F., Qi, J., & Schuster, S. C. (2007) · Genome Research · doi:10.1101/gr.5969107 · Cited by 3,293 · see citing works

Bacterial Community Variation in Human Body Habitats Across Space and Time

Costello, E. K., Lauber, C. L., Hamady, M., Fierer, N., Gordon, J. I., & Knight, R. (2009) · Science · doi:10.1126/science.1177486 · Cited by 3,231 · see citing works

Development of the Human Infant Intestinal Microbiota

Palmer, C., Bik, E. M., DiGiulio, D. B., Relman, D. A., & Brown, P. O. (2007) · PLoS Biology · doi:10.1371/journal.pbio.0050177 · Cited by 2,877 · see citing works

The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing

Dethlefsen, L., Huse, S., Sogin, M. L., & Relman, D. A. (2008) · PLoS Biology · doi:10.1371/journal.pbio.0060280 · Cited by 2,361 · see citing works

Pyrosequencing enumerates and contrasts soil microbial diversity

Roesch, L. F. W., Fulthorpe, R. R., Riva, A., Casella, G., Hadwin, A. K. M., Kent, A. D., Daroub, S. H., Camargo, F. A. D. O., Farmerie, W. G., & Triplett, E. W. (2007) · The ISME Journal · doi:10.1038/ismej.2007.53 · Cited by 1,856 · see citing works

H OW H OST -M ICROBIAL I NTERACTIONS S HAPE THE N UTRIENT E NVIRONMENT OF THE M AMMALIAN I NTESTINE

Hooper, L. V., Midtvedt, T., & Gordon, J. I. (2002) · Annual Review of Nutrition · doi:10.1146/annurev.nutr.22.011602.092259 · Cited by 1,623 · see citing works

Assessment of Soil Microbial Community Structure by Use of Taxon-Specific Quantitative PCR Assays

Fierer, N., Jackson, J. A., Vilgalys, R. J., & Jackson, R. B. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.7.4117-4120.2005 · Cited by 1,571 · see citing works

The role of probiotics in aquaculture

Balcázar, J. L., de Blas, I., Ruiz‐Zarzuela, I., CUNNINGHAM, D., Vendrell, D., & Múzquiz, J. L. (2006) · Veterinary Microbiology · doi:10.1016/j.vetmic.2006.01.009 · Cited by 1,347 · see citing works

Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity

Hughes, J. B., Hellmann, J. J., Ricketts, T. H., & Bohannan, B. J. M. (2001) · Applied and Environmental Microbiology · doi:10.1128/aem.67.10.4399-4406.2001 · Cited by 1,301 · see citing works

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

Kunin, V., Engelbrektson, A., Ochman, H., & Hugenholtz, P. (2009) · Environmental Microbiology · doi:10.1111/j.1462-2920.2009.02051.x · Cited by 1,280 · see citing works

Biodiversity of Vibrios

Thompson, F. L., Iida, T., & Swings, J. (2004) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.68.3.403-431.2004 · Cited by 1,268 · see citing works

A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses

Jones, R. T., Robeson, M. S., Lauber, C. L., Hamady, M., Knight, R., & Fierer, N. (2009) · The ISME Journal · doi:10.1038/ismej.2008.127 · Cited by 1,230 · see citing works

Evidence for a core gut microbiota in the zebrafish

Roeselers, G., Mittge, E., Stephens, W. Z., Parichy, D. M., Cavanaugh, C. M., Guillemin, K. J., & Rawls, J. F. (2011) · The ISME Journal · doi:10.1038/ismej.2011.38 · Cited by 1,145 · see citing works

Symbiotic gut microbes modulate human metabolic phenotypes

Li, M., Wang, B., Zhang, M., Rantalainen, M., Wang, S., Zhou, H., Zhang, Y., Shen, J., Pang, X., Zhang, M., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0712038105 · Cited by 1,144 · see citing works

Comparative Analysis of Human Gut Microbiota by Barcoded Pyrosequencing

Andersson, A. F., Lindberg, M., Jakobsson, H. E., Bäckhed, F., Nyrén, P., & Engstrand, L. G. (2008) · PLoS ONE · doi:10.1371/journal.pone.0002836 · Cited by 1,037 · see citing works

Using ecological diversity measures with bacterial communities

Hill, T. C. J., Walsh, K. A., Harris, J. A., & Moffett, B. F. (2003) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2003.tb01040.x · Cited by 1,016 · see citing works

Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota

Rawls, J. F., Samuel, B. S., & Gordon, J. I. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0400706101 · Cited by 986 · see citing works

DGGE/TGGE a method for identifying genes from natural ecosystems

Gerard Muyzer, C. (1999) · Current Opinion in Microbiology · doi:10.1016/s1369-5274(99)80055-1 · Cited by 902 · see citing works

Microbial Population Structures in the Deep Marine Biosphere

Huber, J. A., Welch, D. B. M., Morrison, H. G., Huse, S. M., Neal, P. R., Butterfield, D. A., & Sogin, M. L. (2007) · Science · doi:10.1126/science.1146689 · Cited by 887 · see citing works

Honor thy symbionts

Xu, J., & Gordon, J. I. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1734063100 · Cited by 856 · see citing works

Vibrio harveyi: a significant pathogen of marine vertebrates and invertebrates

Austin, B. P., & Zhang, X.-H. (2006) · Letters in Applied Microbiology · doi:10.1111/j.1472-765x.2006.01989.x · Cited by 797 · see citing works

Bacterial flora of fishes: A review

Cahill, M. M. (1990) · Microbial Ecology · doi:10.1007/bf02015051 · Cited by 612 · see citing works

Historic emergence, impact and current status of shrimp pathogens in Asia

Flegel, T. W. (2012) · Journal of Invertebrate Pathology · doi:10.1016/j.jip.2012.03.004 · Cited by 609 · see citing works

Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation

Bates, J. M., Mittge, E., Kuhlman, J. A., Baden, K. N., Cheesman, S. E., & Guillemin, K. J. (2006) · Developmental Biology · doi:10.1016/j.ydbio.2006.05.006 · Cited by 607 · see citing works

The use and selection of probiotic bacteria for use in the culture of larval aquatic organisms

Gómez‐Gil, B., Roque, A., & Turnbull, J. F. (2000) · Aquaculture · doi:10.1016/s0044-8486(00)00431-2 · Cited by 498 · see citing works

Effects of a probiotic bacterium on black tiger shrimp Penaeus monodon survival and growth

Rengpipat, S., Phianphak, W., Piyatiratitivorakul, S., & Menasveta, P. (1998) · Aquaculture · doi:10.1016/s0044-8486(98)00305-6 · Cited by 475 · see citing works

Host–microbiota interactions within the fish intestinal ecosystem

Pérez, T., Balcázar, J. L., Ruiz‐Zarzuela, I., Halaihel, N., Vendrell, D., de Blas, I., & Múzquiz, J. L. (2010) · Mucosal Immunology · doi:10.1038/mi.2010.12 · Cited by 438 · see citing works

Improvement of phylum- and class-specific primers for real-time PCR quantification of bacterial taxa

Gregoris, T. B. D., Aldred, N., Clare, A. S., & Burgess, J. G. (2011) · Journal of Microbiological Methods · doi:10.1016/j.mimet.2011.06.010 · Cited by 431 · see citing works

Microbial diversity of intestinal contents and mucus in rainbow trout (Oncorhynchus mykiss)

Kim, D.-H., Brunt, J., & Austin, B. P. (2006) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2006.03185.x · Cited by 366 · see citing works

The presence, nature, and role of gut microflora in aquatic invertebrates: A synthesis

Harris, J. M. (1993) · Microbial Ecology · doi:10.1007/bf00171889 · Cited by 357 · see citing works

A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing

Parameswaran, P., Jalili, R., Tao, L., Shokralla, S., Gharizadeh, B., Ronaghi, M., & Fire, A. Z. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkm760 · Cited by 344 · see citing works

Shifts in microbial community structure along an ecological gradient of hypersaline soils and sediments

Hollister, E. B., Engledow, A. S., Hammett, A. J. M., Provin, T. L., Wilkinson, H. H., & Gentry, T. J. (2010) · The ISME Journal · doi:10.1038/ismej.2010.3 · Cited by 336 · see citing works

Investigation of archaeal and bacterial diversity in fermented seafood using barcoded pyrosequencing

Roh, S. W., Kim, K., Nam, Y., Chang, H.-W., Park, E., & Bae, J. (2009) · The ISME Journal · doi:10.1038/ismej.2009.83 · Cited by 294 · see citing works

Mortalities of pond-cultured juvenile shrimp, Penaeus monodon, associated with dominance of luminescent vibrios in the rearing environment

Lavilla‐Pitogo, C. R., Leaño, E. M., & Paner, M. G. (1998) · Aquaculture · doi:10.1016/s0044-8486(98)00198-7 · Cited by 273 · see citing works

Analysis of Oral Microbiota in Children with Dental Caries by PCR-DGGE and Barcoded Pyrosequencing

Ling, Z., Kong, J., Jia, P., Wei, C., Wang, Y., Pan, Z., Huang, W., Li, L., Chen, H., & Xiang, C. (2010) · Microbial Ecology · doi:10.1007/s00248-010-9712-8 · Cited by 268 · see citing works

Microecology of the termite gut: structure and function on a microscale

Brune, A., & Friedrich, M. W. (2000) · Current Opinion in Microbiology · doi:10.1016/s1369-5274(00)00087-4 · Cited by 245 · see citing works

Physiological and biochemical changes during the molt cycle in decapod crustaceans: an overview

Chang, E. S. (1995) · Journal of Experimental Marine Biology and Ecology · doi:10.1016/0022-0981(95)00106-9 · Cited by 229 · see citing works

Inhibition of Luminescence and Virulence in the Black Tiger Prawn ( Penaeus monodon ) Pathogen Vibrio harveyi by Intercellular Signal Antagonists

Manefield, M. J., Harris, L., Rice, S. A., de Nys, R., & Kjelleberg, S. J. (2000) · Applied and Environmental Microbiology · doi:10.1128/aem.66.5.2079-2084.2000 · Cited by 225 · see citing works

Assessment of the microbial diversity of Brazilian kefir grains by PCR-DGGE and pyrosequencing analysis

Leite, A. M. O., Mayo, B., Rachid, C. T. C. D. C., Peixoto, R. S., Silva, J. T., Paschoalin, V. M. F., & Delgado, S. (2012) · Food Microbiology · doi:10.1016/j.fm.2012.03.011 · Cited by 211 · see citing works

Molecular Analysis of Microbiota Along the Digestive Tract of Juvenile Atlantic Salmon (Salmo salar L.)

Navarrete, P., Espejo, R. T., & Romero, J. (2008) · Microbial Ecology · doi:10.1007/s00248-008-9448-x · Cited by 189 · see citing works

Expression of immune-related genes in the digestive organ of shrimp, Penaeus monodon, after an oral infection by Vibrio harveyi

Soonthornchai, W., Rungrassamee, W., Karoonuthaisiri, N., Jarayabhand, P., Klinbunga, S., Söderhäll, K., & Jiravanichpaisal, P. (2009) · Developmental & Comparative Immunology · doi:10.1016/j.dci.2009.07.007 · Cited by 165 · see citing works

Recent developments in penaeid broodstock and seed production technologies: improving the outlook for superior captive stocks

Browdy, C. L. (1998) · Aquaculture · doi:10.1016/s0044-8486(98)00174-4 · Cited by 151 · see citing works

Bacterial Community Associated with the Intestinal Tract of P. monodon in Commercial Farms

Chaiyapechara, S., Rungrassamee, W., Suriyachay, I., Kuncharin, Y., Klanchui, A., Karoonuthaisiri, N., & Jiravanichpaisal, P. (2011) · Microbial Ecology · doi:10.1007/s00248-011-9936-2 · Cited by 135 · see citing works

Bacterial flora from the gut of the wild and cultured banana prawn, Penaeus merguiensis

Oxley, A. P. A., Shipton, W. A., Owens, L., & McKay, D. (2002) · Journal of Applied Microbiology · doi:10.1046/j.1365-2672.2002.01673.x · Cited by 135 · see citing works

Enhanced growth and resistance to Vibrio challenge in pond-reared black tiger shrimp Penaeus monodon fed a Bacillus probiotic

Rengpipat, S., Tunyanun, A., Fast, A. W., Piyatiratitivorakul, S., & Menasveta, P. (2003) · Diseases of Aquatic Organisms · doi:10.3354/dao055169 · Cited by 125 · see citing works

The intestinal microbial diversity in Chinese shrimp (Fenneropenaeus chinensis) as determined by PCR–DGGE and clone library analyses

Liu, H., Wang, L., Liu, M., Wang, B., Jiang, K., Shao-sai, M., & Li, Q. (2011) · Aquaculture · doi:10.1016/j.aquaculture.2011.04.008 · Cited by 104 · see citing works

Assessment of Variation in Bacterial Composition among Microhabitats in a Mangrove Environment Using DGGE Fingerprints and Barcoded Pyrosequencing

Cleary, D. F. R., Smalla, K., Mendonça-Hagler, L. C., & Gomes, N. C. M. (2012) · PLoS ONE · doi:10.1371/journal.pone.0029380 · Cited by 97 · see citing works

Virulence of Vibrio harveyi responsible for the “Bright-red” Syndrome in the Pacific white shrimp Litopenaeus vannamei

Soto-Rodríguez, S. A., Gómez‐Gil, B., Lozano‐Olvera, R., del Rio-Rodriguez, R. E., Diéguez, A. L., & Romalde, J. L. (2012) · Journal of Invertebrate Pathology · doi:10.1016/j.jip.2012.01.006 · Cited by 95 · see citing works

Expression of immune-related genes in larval stages of the giant tiger shrimp, Penaeus monodon

Jiravanichpaisal, P., Puanglarp, N., Petkon, S., Donnuea, S., Söderhäll, I., & Söderhäll, K. (2007) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2007.03.003 · Cited by 95 · see citing works

Ontogenetic Changes in Enzyme Distribution and Midgut Function in Developmental Stages of Penaeus setiferus (Crustacea, Decapoda, Penaeidae)

Lovett, D. L., & Felder, D. L. (1990) · Biological Bulletin · doi:10.2307/1541974 · Cited by 79 · see citing works

Bacterial community diversity and variation in spray water sources and the tomato fruit surface

Telias, A., White, J. R., Pahl, D. M., Ottesen, A., & Walsh, C. S. (2011) · BMC Microbiology · doi:10.1186/1471-2180-11-81 · Cited by 78 · see citing works

High consistency between replicate 454 pyrosequencing analyses of ectomycorrhizal plant root samples

Kauserud, H., Kumar, S., Brysting, A. K., Nordén, J., & Carlsen, T. (2011) · Mycorrhiza · doi:10.1007/s00572-011-0403-1 · Cited by 71 · see citing works

Localization, abundance and community structure of bacteria associated with Artemia: Effects of nauplii enrichment and antimicrobial treatment

Høj, L., Bourne, D. G., & Hall, M. R. (2009) · Aquaculture · doi:10.1016/j.aquaculture.2009.04.024 · Cited by 67 · see citing works

Ecological Succession of Bacterial Communities during Conventionalization of Germ-Free Mice

Gillilland, M. G., Erb‐Downward, J. R., Bassis, C. M., Shen, M. C., Toews, G. B., Young, V. B., & Huffnagle, G. B. (2012) · Applied and Environmental Microbiology · doi:10.1128/aem.05239-11 · Cited by 63 · see citing works

Microbial Community Analysis of Water, Foregut, and Hindgut during Growth of Pacific White Shrimp, Litopenaeus vannamei, in Closed‐System Aquaculture

Johnson, C. N., Barnes, S. S., Ogle, J. T., Grimes, D. J., Chang, Y., Peacock, A. D., & Kline, L. (2008) · Journal of the World Aquaculture Society · doi:10.1111/j.1749-7345.2008.00155.x · Cited by 62 · see citing works

Bacteria isolated on TCBS media associated with hatched Artemia cysts of commercial brands

López‐Torres, M. A., & Lizárraga‐Partida, M. L. (2001) · Aquaculture · doi:10.1016/s0044-8486(00)00505-6 · Cited by 59 · see citing works

A defined intestinal colonization microbiota for gnotobiotic pigs

Laycock, G. M., Sait, L. C., Inman, C. F., Lewis, M. C., Smidt, H., van Diemen, P. M., Jorgensen, F., Stevens, M. P., & Bailey, M. (2012) · Veterinary Immunology and Immunopathology · doi:10.1016/j.vetimm.2012.07.004 · Cited by 48 · see citing works

SURVIVAL, METAMORPHOSIS AND GROWTH OF PENAEID SHRIMP LARVAE REARED ON A VARIETY OF ALGAL AND ANIMAL FOODS

Wilkenfeld, J. S., Lawrence, A. L., & Kuban, F. D. (1984) · Journal of the World Mariculture Society · doi:10.1111/j.1749-7345.1984.tb00134.x · Cited by 48 · see citing works

A diverse bacterial community in an anoxic quinoline-degrading bioreactor determined by using pyrosequencing and clone library analysis

Zhang, X., Yue, S., Zhong, H., Hua, W., Chen, R., Cao, Y., & Zhao, L. (2011) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-011-3296-1 · Cited by 46 · see citing works

Bacteria associated with Artemia spp. along the salinity gradient of the solar salterns at Eilat (Israel)

Tkavc, R., Ausec, L., Oren, A., & Gunde‐Cimerman, N. (2011) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2011.01112.x · Cited by 38 · see citing works

Recent Advances in Nutrition of Penaeus monodon

Chen, H. (1993) · Journal of the World Aquaculture Society · doi:10.1111/j.1749-7345.1993.tb00012.x · Cited by 34 · see citing works

Aquacultural biotechnology in Thailand: the case of the shrimp industry

Tanticharoen, M., Flegel, T. W., Meerod, W., Grudloyma, U., & Pisamai, N. (2008) · International Journal of Biotechnology · doi:10.1504/ijbt.2008.022494 · Cited by 30 · see citing works

Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity

Hughes, J. B., Hellmann, J. J., Ricketts, T. H., & Bohannan, B. J. M. (2002) · Applied and Environmental Microbiology · doi:10.1128/aem.68.1.448 · Cited by 21 · see citing works

Effects of the Corticosteroid Kenalog on the Carrier State of Juvenile Channel Catfish Exposed toEdwardsiella ictaluri

Antonio, D. B., & Hedrick, R. P. (1994) · Journal of Aquatic Animal Health · doi:10.1577/1548-8667(1994)006 · Cited by 19 · see citing works

Analysis of Multitag Pyrosequence Data from Human Cervical Lavage Samples

Naqvi, A. S., Rangwala, H., Spear, G. T., & Gillevet, P. M. (2010) · Chemistry & Biodiversity · doi:10.1002/cbdv.200900321 · Cited by 8 · see citing works

Development Morphology and Ontogeny of Penaeid Prawns Postlarva

Ribeiro, F. A. L. T. (2010) · CABI eBooks · doi:10.1079/9781800629349.0007 · Cited by 1 · see citing works

Understanding the role of the shrimp gut microbiome in health and disease

Holt, C. C., Bass, D., Stentiford, G. D., & van der Giezen, M. (2020) · Journal of Invertebrate Pathology · doi:10.1016/j.jip.2020.107387 · Cited by 368 · see citing works

Microbiome of Pacific Whiteleg shrimp reveals differential bacterial community composition between Wild, Aquacultured and AHPND/EMS outbreak conditions

Cornejo-Granados, F., Lopez-Zavala, A. A., Gallardo-Becerra, L., Mendoza-Vargas, A., Sánchez, F., Vichido, R., Brieba, L. G., Viana, M. T., Sotelo-Mundo, R. R., & Ochoa-Leyva, A. (2017) · Scientific Reports · doi:10.1038/s41598-017-11805-w · Cited by 302 · see citing works

Characterization of Intestinal Bacteria in Wild and Domesticated Adult Black Tiger Shrimp (Penaeus monodon)

Rungrassamee, W., Klanchui, A., Maibunkaew, S., Chaiyapechara, S., Jiravanichpaisal, P., & Karoonuthaisiri, N. (2014) · PLoS ONE · doi:10.1371/journal.pone.0091853 · Cited by 285 · see citing works

Bacterial community characterization of water and intestine of the shrimp Litopenaeus stylirostris in a biofloc system

Cardona, E., Gueguen, Y., Magré, K., Lorgeoux, B., Piquemal, D., Pierrat, F., Noguier, F., & Saulnier, D. (2016) · BMC Microbiology · doi:10.1186/s12866-016-0770-z · Cited by 268 · see citing works

Characterization of the intestinal microbiota in Pacific white shrimp, Litopenaeus vannamei, fed diets with different lipid sources

Zhang, M., Sun, Y., Chen, K., Yu, N., Zhou, Z., Chen, L., Du, Z., & Li, E. (2014) · Aquaculture · doi:10.1016/j.aquaculture.2014.09.008 · Cited by 230 · see citing works

Bacterial dynamics in intestines of the black tiger shrimp and the Pacific white shrimp during Vibrio harveyi exposure

Rungrassamee, W., Klanchui, A., Maibunkaew, S., & Karoonuthaisiri, N. (2016) · Journal of Invertebrate Pathology · doi:10.1016/j.jip.2015.11.004 · Cited by 222 · see citing works

Changes in the intestinal bacterial community during the growth of white shrimp, <i>Litopenaeus vannamei</i>

Huang, Z., Li, X., Wang, L., & Shao, Z. (2016) · Aquaculture Research · doi:10.1111/are.12628 · Cited by 205 · see citing works

Microbiome Dynamics in a Shrimp Grow-out Pond with Possible Outbreak of Acute Hepatopancreatic Necrosis Disease

Chen, W., Ng, T. H., Wu, J., Chen, J.-W., & Wang, H. (2017) · Scientific Reports · doi:10.1038/s41598-017-09923-6 · Cited by 202 · see citing works

Intestinal bacterial signatures of white feces syndrome in shrimp

Hou, D., Huang, Z., Zeng, S., Liu, J., Wei, D., Deng, X., Weng, S., Yan, Q., & He, J. (2018) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-018-8855-2 · Cited by 195 · see citing works

Healthy microbiome: a key to successful and sustainable shrimp aquaculture

Rajeev, R., Adithya, K. K., Kiran, G. S., & Selvin, J. (2020) · Reviews in Aquaculture · doi:10.1111/raq.12471 · Cited by 175 · see citing works

Bacterial community associated with healthy and diseased pacific white shrimp (Litopenaeus vannamei) larvae and rearing water across different growth stages

Zheng, Y., Yu, M., Liu, J., Qiao, Y., Wang, L., Li, Z., Zhang, X.-H., & Yu, M. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.01362 · Cited by 165 · see citing works

Aquaculture industry prospective from gut microbiome of fish and shellfish: An overview

Diwan, A. D., Harke, S. N., Gopalkrishna, & Panche, A. N. (2021) · Journal of Animal Physiology and Animal Nutrition · doi:10.1111/jpn.13619 · Cited by 157 · see citing works

A meta-analysis reveals the environmental and host factors shaping the structure and function of the shrimp microbiota

Cornejo‐Granados, F., Gallardo-Becerra, L., Leonardo-Reza, M., Ochoa‐Romo, J. P., & Ochoa‐Leyva, A. (2018) · PeerJ · doi:10.7717/peerj.5382 · Cited by 145 · see citing works

Comparison of cultivable bacterial communities associated with Pacific white shrimp (Litopenaeus vannamei) larvae at different health statuses and growth stages

Zheng, Y., Yu, M., Liu, Y., Su, Y., Xu, T., Yu, M., & Zhang, X.-H. (2015) · Aquaculture · doi:10.1016/j.aquaculture.2015.09.020 · Cited by 133 · see citing works

Advances, challenges, and directions in shrimp disease control: the guidelines from an ecological perspective

Xiong, J., Dai, W., & Li, C. (2016) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-016-7679-1 · Cited by 130 · see citing works

Fine-scale succession patterns and assembly mechanisms of bacterial community of Litopenaeus vannamei larvae across the developmental cycle

Wang, Y., Wang, K., Huang, L., Dong, P., Wang, S., Chen, H., Lu, Z., Hou, D., & Zhang, D. (2020) · Microbiome · doi:10.1186/s40168-020-00879-w · Cited by 126 · see citing works

Comparative analysis of the bacterial community compositions of the shrimp intestine, surrounding water and sediment

Hou, D., Huang, Z., Zeng, S., Liu, J., Weng, S., & He, J. (2018) · Journal of Applied Microbiology · doi:10.1111/jam.13919 · Cited by 111 · see citing works

Progress in the gut microbiota in exploring shrimp disease pathogenesis and incidence

Xiong, J. (2018) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-018-9199-7 · Cited by 108 · see citing works

Insights into the intestinal microbiota of several aquatic organisms and association with the surrounding environment

Sun, F., Wang, Y., Wang, C., Zhang, L., Tu, K., & Zheng, Z. (2019) · Aquaculture · doi:10.1016/j.aquaculture.2019.04.026 · Cited by 109 · see citing works

Symbiotic Bacteria in Gills and Guts of Chinese Mitten Crab (Eriocheir sinensis) Differ from the Free-Living Bacteria in Water

Zhang, M., Sun, Y., Chen, L., Cai, C., Qiao, F., Du, Z., & Li, E. (2016) · PLoS ONE · doi:10.1371/journal.pone.0148135 · Cited by 102 · see citing works

Interaction of Vibrio spp. with the Inner Surface of the Digestive Tract of Penaeus monodon

Soonthornchai, W., Chaiyapechara, S., Jarayabhand, P., Söderhäll, K., & Jiravanichpaisal, P. (2015) · PLoS ONE · doi:10.1371/journal.pone.0135783 · Cited by 99 · see citing works

Host-microbiome interaction in fish and shellfish: An overview

Diwan, A. D., Harke, S. N., & Panche, A. N. (2023) · Fish and Shellfish Immunology Reports · doi:10.1016/j.fsirep.2023.100091 · Cited by 96 · see citing works

Effects of host gut-derived probiotic bacteria on gut morphology, microbiota composition and volatile short chain fatty acids production of Malaysian Mahseer Tor tambroides

Asaduzzaman, M., Iehata, S., Akter, S., Kader, M. A., Ghosh, S. K., Khan, M. N. A., & Abol‐Munafi, A. B. (2018) · Aquaculture Reports · doi:10.1016/j.aqrep.2017.12.003 · Cited by 95 · see citing works

Dietary lipid levels could improve growth and intestinal microbiota of juvenile swimming crab, Portunus trituberculatus

Sun, P., Jin, M., Ding, L.-Y., You, L., Ma, H., Yuan, Y., & Zhou, Q.-C. (2018) · Aquaculture · doi:10.1016/j.aquaculture.2018.02.018 · Cited by 80 · see citing works

Effects of Host Phylogeny and Habitats on Gut Microbiomes of Oriental River Prawn (Macrobrachium nipponense)

Tzeng, T.-D., Pao, Y.-Y., Chen, P., Weng, F. C.-H., Jean, W. D., & Wang, D. (2015) · PLoS ONE · doi:10.1371/journal.pone.0132860 · Cited by 81 · see citing works

Rapid Change of Microbiota Diversity in the Gut but Not the Hepatopancreas During Gonadal Development of the New Shrimp Model Neocaridina denticulata

Cheung, M. K., Yip, H. Y., Nong, W., Law, P. T. W., Chu, K. H., Kwan, H. S., & Hui, J. H. L. (2015) · Marine Biotechnology · doi:10.1007/s10126-015-9662-8 · Cited by 78 · see citing works

Metagenomics in bioflocs and their effects on gut microbiome and immune responses in Pacific white shrimp

Tepaamorndech, S., Nookaew, I., Higdon, S. M., Santiyanont, P., Phromson, M., Chantarasakha, K., Mhuantong, W., Plengvidhya, V., & Visessanguan, W. (2020) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2020.08.042 · Cited by 77 · see citing works

Disease outbreak accompanies the dispersive structure of shrimp gut bacterial community with a simple core microbiota

Yao, Z., Yang, K., Huang, L., Huang, X., Qiuqian, L., Wang, K., & Zhang, D. (2018) · AMB Express · doi:10.1186/s13568-018-0644-x · Cited by 76 · see citing works

Persistence and spatial variation of antibiotic resistance genes and bacterial populations change in reared shrimp in South China

Su, H., Hu, X., Xu, Y., Xu, W., Huang, X., Wen, G., Yang, K., Li, Z., & Cao, Y. (2018) · Environment International · doi:10.1016/j.envint.2018.07.007 · Cited by 74 · see citing works

Clostridium butyricumas probiotic for promoting growth performance, feed utilization, gut health and microbiota community of tilapia (Oreochromis niloticus × O. aureus)

Poolsawat, L., Li, X., He, M. R., Ji, D., & Leng, X. (2019) · Aquaculture Nutrition · doi:10.1111/anu.13025 · Cited by 70 · see citing works

Bacterial Population in Intestines of Litopenaeus vannamei Fed Different Probiotics or Probiotic Supernatant

Sha, Y., Liu, M., Wang, B., Jiang, K., Qi, C., & Wang, L. (2016) · Journal of Microbiology and Biotechnology · doi:10.4014/jmb.1603.03078 · Cited by 69 · see citing works

Effects of dietary poly-β-hydroxybutyrate (PHB) on microbiota composition and the mTOR signaling pathway in the intestines of litopenaeus vannamei

Duan, Y., Zhang, Y., Dong, H., Wang, Y., & Zhang, J. (2017) · The Journal of Microbiology · doi:10.1007/s12275-017-7273-y · Cited by 65 · see citing works

Effects of Yu-Ping-Feng polysaccharides (YPS) on the immune response, intestinal microbiota, disease resistance and growth performance of Litopenaeus vannamei

Su, C., Fan, D., Pan, L., Lu, Y., Wang, Y., & Zhang, M. (2020) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2020.07.003 · Cited by 64 · see citing works

Developmental, Dietary, and Geographical Impacts on Gut Microbiota of Red Swamp Crayfish (Procambarus clarkii)

Zhang, Z., Liu, J., Jin, X., Liu, C., Fan, C., Guo, L., Liang, Y., Zheng, J., & Peng, N. (2020) · Microorganisms · doi:10.3390/microorganisms8091376 · Cited by 64 · see citing works

Host gut-derived Bacillus probiotics supplementation improves growth performance, serum and liver immunity, gut health, and resistive capacity against Vibrio harveyi infection in hybrid grouper (♀Epinephelus fuscoguttatus × ♂Epinephelus lanceolatus)

Amoah, K., Tan, B., Zhang, S., Chi, S., Yang, Q., Liu, H., Yang, Y., Zhang, H., & Dong, X. (2023) · Animal nutrition · doi:10.1016/j.aninu.2023.05.005 · Cited by 63 · see citing works

Effects on development and microbial community of shrimp Litopenaeus vannamei larvae with probiotics treatment

Wang, R., Guo, Z., Tang, Y., Kuang, J., Duan, Y., Lin, H., Jiang, S., Shu, H., & Huang, J. (2020) · AMB Express · doi:10.1186/s13568-020-01041-3 · Cited by 62 · see citing works

Deep insight into bacterial community characterization and relationship in the pond water, sediment and the gut of shrimp (Penaeus japonicus)

Zhou, L., Qu, Y., Qin, J. G., Chen, L., Han, F., & Li, E. (2021) · Aquaculture · doi:10.1016/j.aquaculture.2021.736658 · Cited by 59 · see citing works

Change in the intestinal bacterial community structure associated with environmental microorganisms during the growth of Eriocheir sinensis

Wang, C., Zhou, Y., Lv, D., Ge, Y., Li, H., & You, Y. (2018) · MicrobiologyOpen · doi:10.1002/mbo3.727 · Cited by 59 · see citing works

Bacterial population in intestines of white shrimp, Litopenaeus vannamei fed a synbiotic containing Lactobacillus plantarum and galactooligosaccharide

Huynh, T.-G., Hu, S., Chiu, C.-S., Truong, Q.-P., & Liu, C. (2019) · Aquaculture Research · doi:10.1111/are.13951 · Cited by 57 · see citing works

Bacterial analysis in the early developmental stages of the black tiger shrimp (Penaeus monodon)

Angthong, P., Uengwetwanit, T., Arayamethakorn, S., Chaitongsakul, P., Karoonuthaisiri, N., & Rungrassamee, W. (2020) · Scientific Reports · doi:10.1038/s41598-020-61559-1 · Cited by 58 · see citing works

Insights into the Gut Microbiota of Freshwater Shrimp and Its Associations with the Surrounding Microbiota and Environmental Factors

Zhao, Y., Duan, C., Zhang, X., Chen, H., Ren, H., Yin, Y., & Ye, L. (2018) · Journal of Microbiology and Biotechnology · doi:10.4014/jmb.1709.09070 · Cited by 58 · see citing works

Analysis of the intestinal microbial community in healthy and diarrheal perinatal yaks by high-throughput sequencing

Han, Z., Li, K., Shahzad, M. A., Zhang, H., Luo, H., Qiu, G., Lan, Y., Wang, X., Mehmood, K., & Li, J. (2017) · Microbial Pathogenesis · doi:10.1016/j.micpath.2017.08.025 · Cited by 57 · see citing works

New Insights into the Mechanism of Action of PirAB from Vibrio Parahaemolyticus

Soto-Rodríguez, S. A., Lozano‐Olvera, R., Montfort, G. R.-C., Zenteno, E., Sánchez‐Salgado, J. L., Vibanco‐Pérez, N., & Aguilar-Rendón, K. G. (2022) · Toxins · doi:10.3390/toxins14040243 · Cited by 55 · see citing works

The cellular community in the intestine of the shrimp Penaeus penicillatus and its culture environments

Wang, C.-Z., Lin, G., Yan, T., Zheng, Z., Chen, B., & Sun, F. (2014) · Fisheries Science · doi:10.1007/s12562-014-0765-3 · Cited by 55 · see citing works

Intestine Bacterial Community Composition of Shrimp Varies Under Low- and High-Salinity Culture Conditions

Hou, D., Zhou, R., Zeng, S., Wei, D., Deng, X., Xing, C., Yu, L., Deng, Z., Wang, H., Weng, S., et al. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.589164 · Cited by 54 · see citing works

Bacterial concentration and diversity in fresh tropical shrimps (Penaeus notialis) and the surrounding brackish waters and sediment

Dabadé, D. S., Wolkers-Rooijackers, J. C. M., Azokpota, P., Hounhouigan, J. D., Zwietering, M. H., Nout, M. J. R., & den Besten, H. M. W. (2015) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2015.11.013 · Cited by 51 · see citing works

Developmental and gut-related changes to microbiomes of the cultured juvenile spiny lobster Panulirus ornatus

Ooi, M. C., Goulden, E. F., Smith, G. G., Nowak, B. F., & Bridle, A. R. (2017) · FEMS Microbiology Ecology · doi:10.1093/femsec/fix159 · Cited by 51 · see citing works

Effects on survival and bacterial community composition of the aquaculture water and gastrointestinal tract of shrimp (Litopenaeus vannamei) exposed to probiotic treatments after an induced infection of acute hepatopancreatic necrosis disease

Pinoargote, G., Flores, G. E., Cooper, K. K., & Ravishankar, S. (2018) · Aquaculture Research · doi:10.1111/are.13791 · Cited by 50 · see citing works

Intestinal microbiota of white shrimp, Litopenaeus vannamei, fed diets containing Bacillus subtilis E20‐fermented soybean meal (FSBM) or an antimicrobial peptide derived from B. subtilis E20‐FSBM

Cheng, A., Yeh, S., Hu, S., Lin, H., & Liu, C. (2019) · Aquaculture Research · doi:10.1111/are.14345 · Cited by 48 · see citing works

Intestinal Microbiota of White Shrimp Penaeus vannamei Under Intensive Cultivation Conditions in Ecuador

Gainza, O., Ramírez, C., Ramos, A. S., & Romero, J. (2017) · Microbial Ecology · doi:10.1007/s00248-017-1066-z · Cited by 47 · see citing works

Establishment of microbiota in larval culture of Pacific oyster, Crassostrea gigas

Asmani, K., Petton, B., Grand, J. L., Mounier, J., Robert, R., & Nicolas, J.-L. (2016) · Aquaculture · doi:10.1016/j.aquaculture.2016.07.020 · Cited by 46 · see citing works

Understanding the host-microbe-environment interactions: Intestinal microbiota and transcriptomes of black tiger shrimp Penaeus monodon at different salinity levels

Chaiyapechara, S., Uengwetwanit, T., Arayamethakorn, S., Bunphimpapha, P., Phromson, M., Jangsutthivorawat, W., Tala, S., Karoonuthaisiri, N., & Rungrassamee, W. (2021) · Aquaculture · doi:10.1016/j.aquaculture.2021.737371 · Cited by 43 · see citing works

Taxonomic and functional changes in the microbiota of the white shrimp (Litopenaeus vannamei) associated with postlarval ontogenetic development

Garibay-Valdéz, E., Martínez‐Porchas, M., Calderón, K., Vargas‐Albores, F., Gollas‐Galván, T., & Martínez‐Córdova, L. R. (2019) · Aquaculture · doi:10.1016/j.aquaculture.2019.734842 · Cited by 42 · see citing works

Overfeeding a High-Fat Diet Promotes Sex-Specific Alterations on the Gut Microbiota of the Zebrafish ( Danio rerio )

Navarro-Barrón, E., Hernández, C., Llera‐Herrera, R., Garcı́a-Gasca, A., & Gómez‐Gil, B. (2019) · Zebrafish · doi:10.1089/zeb.2018.1648 · Cited by 42 · see citing works

Microbes and pathogens associated with shrimps - implications and review of possible control strategies

Bhassu, S., Shama, M., Tiruvayipati, S., Soo, T. C. C., Ahmed, N., & Yusoff, K. (2024) · Frontiers in Marine Science · doi:10.3389/fmars.2024.1397708 · Cited by 38 · see citing works

The intestinal bacterial community of healthy and diseased animals and its association with the aquaculture environment

Sun, F., Wang, C., Chen, L., Weng, G., & Zheng, Z. (2019) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-019-10236-z · Cited by 38 · see citing works

Dietary manganese requirement and its effects on antioxidant enzyme activities, intestinal morphology and microbiota in oriental river prawn Macrobrachium nipponense (De Haan)

Ding, Z., Chen, X., Kong, Y., Shao, X., Zhang, Y., & Ye, J. (2019) · Aquaculture · doi:10.1016/j.aquaculture.2019.734622 · Cited by 33 · see citing works

Fermented Animal Source Protein as Substitution of Fishmeal on Intestinal Microbiota, Immune-Related Cytokines and Resistance to Vibrio mimicus in Freshwater Crayfish (Cherax cainii)

Siddik, M. A. B., Fotedar, R. K., Chaklader, M. R., Foysal, M. J., Nahar, A., & Howieson, J. (2020) · Frontiers in Physiology · doi:10.3389/fphys.2019.01635 · Cited by 33 · see citing works

Effects of live microalgae and algae powder on microbial community, survival, metamorphosis and digestive enzyme activity of Penaeus monodon larvae at different growth stages

Tang, Y., Wang, R., Tan, L., Guo, L., Duan, Y., Yang, L., Jiang, S., Zhou, F., Jiang, S., & Huang, J. (2020) · Aquaculture · doi:10.1016/j.aquaculture.2020.735344 · Cited by 33 · see citing works

Changes in the intestinal microbiota of Pacific white shrimp (Litopenaeus vannamei) with different severities of Enterocytozoon hepatopenaei infection

Shen, H., Dou, Y., Li, H., Qiao, Y., Jiang, G., Wan, X., Cheng, J., Fan, X., Li, H., Wang, L., et al. (2022) · Journal of Invertebrate Pathology · doi:10.1016/j.jip.2022.107763 · Cited by 33 · see citing works

Shrimp microbiome and immune development in the early life stages

Angthong, P., Chaiyapechara, S., & Rungrassamee, W. (2023) · Developmental & Comparative Immunology · doi:10.1016/j.dci.2023.104765 · Cited by 33 · see citing works

Bacterial community composition and distribution in different segments of the gastrointestinal tract of wild-caught adultPenaeus monodon

Mongkol, P., Bunphimpapha, P., Rungrassamee, W., Arayamethakorn, S., Klinbunga, S., Menasveta, P., & Chaiyapechara, S. (2017) · Aquaculture Research · doi:10.1111/are.13468 · Cited by 32 · see citing works

Insights into the microbiota of larval and postlarval Pacific white shrimp (Penaeus vannamei) along early developmental stages: a case in pond level

Wang, H., Huang, J., Wang, P., & Li, T. (2020) · Molecular Genetics and Genomics · doi:10.1007/s00438-020-01717-2 · Cited by 32 · see citing works

A meta‐analysis study of the robustness and universality of gut microbiota–shrimp diseases relationship

Sha, H., Lü, J., Chen, J., & Xiong, J. (2022) · Environmental Microbiology · doi:10.1111/1462-2920.16024 · Cited by 32 · see citing works

C-Type Lectin Maintains the Homeostasis of Intestinal Microbiota and Mediates Biofilm Formation by Intestinal Bacteria in Shrimp

Zhang, Y., Zhang, M.-L., & Wang, X. (2021) · The Journal of Immunology · doi:10.4049/jimmunol.2000116 · Cited by 31 · see citing works

Supplementing artemisinin positively influences growth, antioxidant capacity, immune response, gut health and disease resistance against Vibrio parahaemolyticus in Litopenaeus vannamei fed cottonseed protein concentrate meal diets

Liu, H., Chen, G., Li, L., Lin, Z., Tan, B., Dong, X., Yang, Q., Chi, S., Zhang, S., & Zhou, X. (2022) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2022.09.055 · Cited by 31 · see citing works

Changes of water, sediment, and intestinal bacterial communities in Penaeus japonicus cultivation and their impacts on shrimp physiological health

Song, M., Pan, L., Zhang, M., Huang, F., Gao, S., & Tian, C. (2020) · Aquaculture International · doi:10.1007/s10499-020-00562-9 · Cited by 30 · see citing works

Evaluation of two probiotics used during farm production of white shrimp Litopenaeus vannamei (Crustacea: Decapoda)

Franco, R., Martín, L., Arenal, A., Santiesteban, D., Sotolongo, J., Cabrera, H., Mejías, J. L. P., Rodríguez, G., Moreno, Á., Pimentel, E., et al. (2016) · Aquaculture Research · doi:10.1111/are.13031 · Cited by 28 · see citing works

The Active Microbiota of the Eggs and the Nauplii of the Pacific Blue Shrimp Litopenaeus stylirostris Partially Shaped by a Potential Vertical Transmission

Giraud, C., Callac, N., Boulo, V., Lam, J.-S., Pham, D., Selmaoui-Folcher, N., & Wabete, N. (2022) · Frontiers in Microbiology · doi:10.3389/fmicb.2022.886752 · Cited by 26 · see citing works

Rationally designed probiotics prevent shrimp white feces syndrome via the probiotics–gut microbiome–immunity axis

Sha, H., Lü, J., Chen, J., & Xiong, J. (2024) · npj Biofilms and Microbiomes · doi:10.1038/s41522-024-00509-5 · Cited by 27 · see citing works

BALOs Improved Gut Microbiota Health in Postlarval Shrimp (Litopenaeus vannamei) After Being Subjected to Salinity Reduction Treatment

Cao, Q., Najnine, F., Han, H., Wu, B., & Cai, J. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.01296 · Cited by 27 · see citing works

Application of enzyme-hydrolyzed cassava dregs as a carbon source in aquaculture

Shang, Q., Tang, H., Wang, Y., Yu, K., Wang, L., Zhang, R., Wang, S., Xue, R., & Wei, C. (2017) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2017.08.256 · Cited by 25 · see citing works

Effects of sulfated β-glucan from Saccharomyces cerevisiae on growth performance, antioxidant ability, nonspecific immunity, and intestinal flora of the red swamp crayfish (Procambarus clarkii)

Huang, Q. Q., Zhu, Y., Yu, J., Fang, L., Li, Y., Wang, M., Liu, J., Yan, P., Xia, J., Liu, G., et al. (2022) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2022.06.056 · Cited by 25 · see citing works

Potential lineage transmission within the active microbiota of the eggs and the nauplii of the shrimp <i>Litopenaeus stylirostris</i> : possible influence of the rearing water and more

Giraud, C., Callac, N., Beauvais, M., Mailliez, J.-R., Ansquer, D., Selmaoui-Folcher, N., Pham, D., Wabete, N., & Boulo, V. (2021) · PeerJ · doi:10.7717/peerj.12241 · Cited by 23 · see citing works

The implication of metabolically active Vibrio spp. in the digestive tract of Litopenaeus vannamei for its post-larval development

Garibay-Valdéz, E., Martínez‐Córdova, L. R., López‐Torres, M. A., Almendáriz-Tapia, F. J., Martínez‐Porchas, M., & Calderón, K. (2020) · Scientific Reports · doi:10.1038/s41598-020-68222-9 · Cited by 23 · see citing works

Comparison of the Intestinal Microbiota During the Different Growth Stages of Red Swamp Crayfish (Procambarus clarkii)

Xie, M., Zhang, S., Xu, L., Wu, Z., Yuan, J., & Chen, X. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.696281 · Cited by 23 · see citing works

Comparative Analysis of the Symbiotic Microbiota in the Chinese Mitten Crab (Eriocheir sinensis): Microbial Structure, Co-Occurrence Patterns, and Predictive Functions

Yang, J., Zhang, Q., Zhang, T., Wang, S., Hao, J., Wu, Z., & Li, A. (2023) · Microorganisms · doi:10.3390/microorganisms11030544 · Cited by 22 · see citing works

Study of effects of dietary quercetin (Que) on growth performance and disease resistance mechanism of Litopenaeus vannamei

Chen, Z., Fan, D., Pan, L., Su, C., Ding, Y., & Lu, M. (2022) · Aquaculture · doi:10.1016/j.aquaculture.2022.738887 · Cited by 22 · see citing works

Deciphering the influence of dietary synbiotics in white shrimp gut and its effects in regulating immune signaling pathways

Das, S. P., Abidin, Z., Huang, H., Lin, Y., Huang, C., Wu, Y., Hu, Y., & Nan, F. (2024) · Frontiers in Marine Science · doi:10.3389/fmars.2023.1342708 · Cited by 22 · see citing works

Symbiotic strategies: deciphering the role of gut microbiota in the nutrition and metabolism of fish and shellfish

Rai, N., Kachore, A., JULKA, J. M., Panigrahi, A., Das, S. P., & Nan, F. (2025) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2025.1639426 · Cited by 21 · see citing works

Intestinal Microbiota in Large Yellow Croaker, Larimichthys crocea , at Different Ages

Wei, N., Wang, C., Xiao, S., Huang, W., Lin, M., Yan, Q., & Ma, Y. (2017) · Journal of the World Aquaculture Society · doi:10.1111/jwas.12463 · Cited by 21 · see citing works

Understanding the roles of surface proteins in regulation of Lactobacillus pentosus HC-2 to immune response and bacterial diversity in midgut of Litopenaeus vannamei

Du, Y., Zhou, S., Liu, M., Wang, B., Jiang, K., Fang, H., & Wang, L. (2018) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2018.12.073 · Cited by 20 · see citing works

Patterns of Bacterial Community Composition and Diversity Following the Embryonic Development Stages of Macrobrachium rosenbergii

Liu, B., Liu, B., Zhou, Q., Sun, C., Song, C., Zhang, H., Yang, Z., & Shan, F. (2020) · Aquaculture Reports · doi:10.1016/j.aqrep.2020.100372 · Cited by 21 · see citing works

Process optimization for fermented siwu decoction by multi-index-response surface method and exploration of the effects of fermented siwu decoction on the growth, immune response and resistance to Vibrio harveyi of Pacific white shrimp (Litopenaeus vannamei)

Wang, Y., Liu, X., Su, C., Ding, Y., & Pan, L. (2021) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2021.11.029 · Cited by 19 · see citing works

Effects of dietary heat‐killed Lactobacillus plantarum and compound probiotics on the growth performance, antioxidative capacity, intestinal morphology and microbiota of Pacific white shrimp Litopenaeus vannamei

Ren, X., Han, Y., Zeng, F., Rabbi, M. H., Li, Z., Cui, S., Wu, L., Chan, Q., Li, M., & Ren, T. (2022) · Aquaculture Research · doi:10.1111/are.15857 · Cited by 19 · see citing works

Effect of dietary supplementation with sodium butyrate and tributyrin on the growth performance and intestinal microbiota of Pacific white shrimp (Litopenaeus vannamei)

Liu, L., Wang, Y., Ren, J., Zou, H., & Wang, C. (2022) · Aquaculture International · doi:10.1007/s10499-022-00909-4 · Cited by 19 · see citing works

Integrating microbiome and transcriptome analyses to understand the effect of replacing fishmeal with Tenebrio molitor meal in Pacific white shrimp (Litopenaeus vannamei) diets

Zheng, Y., Hou, C., Chen, J., Wang, H., Yuan, H., Hu, N., Shi, L., & Zhang, S. (2023) · Aquaculture · doi:10.1016/j.aquaculture.2023.739818 · Cited by 19 · see citing works

Implications of dietary soybean meal replacement with corn gluten meal on growth performance, antioxidant activities, hepatopancreatic histopathology, and intestinal flora of juvenile Pacific shrimp (Litopenaeus vannamei)

Yohana, M. A., Ray, G. W., Yang, Q., Tan, B., Chi, S., Lin, H., Mao, M., & Yi, Y. (2023) · Aquaculture Reports · doi:10.1016/j.aqrep.2023.101821 · Cited by 18 · see citing works

16 S rRNA gene diversity and gut microbial composition of the Indian white shrimp (Penaeus indicus)

Patil, P. K., Vinay, T. N., Ghate, S. D., Baskaran, V., & Avunje, S. (2021) · Antonie van Leeuwenhoek · doi:10.1007/s10482-021-01658-9 · Cited by 18 · see citing works

Consistent features of the gut microbiota in response to diverse shrimp Litopenaeus vannamei diseases: A meta‐analysis

Mao, J., Lü, J., Chen, J., & Xiong, J. (2023) · Fish and Fisheries · doi:10.1111/faf.12787 · Cited by 17 · see citing works

Effect of functional diets on intestinal microbiota and resistance to Vibrio parahaemolyticus causing acute hepatopancreatic necrosis disease (AHPND) of Pacific white shrimp (Penaeus vannamei)

Quiróz-Guzmán, E., Cabrera-Stevens, M. J., Sánchez‐Paz, A., Mendoza-Cano, F., Encinas-García, T., Barajas-Sandoval, D. R., Gómez‐Gil, B., & Peña‐Rodríguez, A. (2022) · Journal of Applied Microbiology · doi:10.1111/jam.15448 · Cited by 17 · see citing works

Comparative analysis of the intestinal bacterial communities in mud crab Scylla serrata in South India

Apine, E., Rai, P., Mani, M. K., Subramanian, V., Karunasagar, I., Godhe, A., & Turner, L. M. (2021) · MicrobiologyOpen · doi:10.1002/mbo3.1179 · Cited by 15 · see citing works

Dynamics of the surgical microbiota along the cardiothoracic surgery pathway

Romano-Bertrand, S., Frapier, J.-M., Calvet, B., Colson, P. H., Albat, B., Parer, S., & Jumas‐Bilak, E. (2015) · Frontiers in Microbiology · doi:10.3389/fmicb.2014.00787 · Cited by 15 · see citing works

Growth Promoting Potential and Colonization Ability of Probiotics (Bacillus coagulans and Bacillus subtilis) on the Freshwater Prawn Macrobrachium rosenbergii Post-Larvae

Karthik, M., Saravana Bhavan, P., & Manjula, T. (2018) · Insights in Biology and Medicine · doi:10.29328/journal.ibm.1001011 · Cited by 15 · see citing works

Bacterial Community Dynamics During Nursery Rearing of Pacific White Shrimp (Litopenaeus vannamei) Revealed via High-Throughput Sequencing

Yan, M., Zhang, X., Hu, L., Huang, X., Zhou, Q., Zeng, G., Zhang, J., Xiao, G., Chai, X., & Chen, J. (2020) · Indian Journal of Microbiology · doi:10.1007/s12088-019-00853-7 · Cited by 15 · see citing works

Influence of gut microbiome on health and development of penaeid shrimps

Hembrom, P. S., Barik, S., Deepthi, M., Kannoth, S., & Grace, T. (2023) · Aquatic Sciences · doi:10.1007/s00027-023-01018-x · Cited by 15 · see citing works

The links among Enterocytozoon hepatopenaei infection, growth retardation and intestinal microbiota in different sized shrimp Penaeus vannamei

Shen, H., Fan, X., Qiao, Y., Jiang, G., Wan, X., Cheng, J., Li, H., Dou, Y., Li, H., Wang, L., et al. (2021) · Aquaculture Reports · doi:10.1016/j.aqrep.2021.100888 · Cited by 14 · see citing works

Fungi isolated from Madagascar shrimps - investigation of the Aspergillus niger metabolism by combined LC-MS and NMR metabolomics studies

GEDICE, M. T., Roullier, C., Guitton, Y., Lalande-Martin, J., Lacoste, S., Dupont, J., Ruiz, N., Pouchus, Y. F., Raheriniaina, C. E., & Ranaivoson, E. (2017) · Aquaculture · doi:10.1016/j.aquaculture.2017.07.015 · Cited by 13 · see citing works

Impact of Climate Change on the Gut Microbiome of Fish and Shellfish

Diwan, A. D., Harke, S. N., & Panche, A. N. (2023) · Springer eBooks · doi:10.1007/978-981-99-0852-3_12 · Cited by 12 · see citing works

Novel indigenous probiotic isolated from the healthy Pacific white shrimp Litopenaeus vannamei intestine in differing stages based on metagenomic and screening approaches

Sutanti, S., Sukenda, S., Widanarni, W., Alimuddin, A., & Aliah, R. S. (2024) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2024.109678 · Cited by 12 · see citing works

Bacterial community in intestine of black tiger shrimp Penaeus monodon

Mongkol, P., Menasveta, P., Chaiyapechara, S., & Klinbunga, S. (2011) · doi:10.58837/chula.the.2011.1130

Characterization of Intestinal Bacteria in Wild and Domesticated Adult Black Tiger Shrimp (Penaeus monodon)

Rungrassamee, W., Klanchui, A., Maibunkaew, S., Chaiyapechara, S., Jiravanichpaisal, P., & Karoonuthaisiri, N. (2014) · PLoS ONE · doi:10.1371/journal.pone.0091853 · Cited by 285 · see citing works

Bacterial Community Associated with the Intestinal Tract of P. monodon in Commercial Farms

Chaiyapechara, S., Rungrassamee, W., Suriyachay, I., Kuncharin, Y., Klanchui, A., Karoonuthaisiri, N., & Jiravanichpaisal, P. (2011) · Microbial Ecology · doi:10.1007/s00248-011-9936-2 · Cited by 135 · see citing works

Bacterial analysis in the early developmental stages of the black tiger shrimp (Penaeus monodon)

Angthong, P., Uengwetwanit, T., Arayamethakorn, S., Chaitongsakul, P., Karoonuthaisiri, N., & Rungrassamee, W. (2020) · Scientific Reports · doi:10.1038/s41598-020-61559-1 · Cited by 58 · see citing works

Variation of bacterial communities in black tiger shrimp (Penaeus monodon) with different growth performances

Li, Y., Zhou, F., Zhang, W., Yang, Q., Jiang, S., Huang, J., Yang, L., & Jiang, S. (2021) · Israeli Journal of Aquaculture - Bamidgeh · doi:10.46989/001c.30754 · Cited by 5 · see citing works