The DOI matches its Crossref record; 42 of the 42 references it cites were found in a registry or an index.
Ancient Dispersal of the Human Fungal Pathogen Cryptococcus gattii from the Amazon Rainforest
Open accessAbstract
Over the past two decades, several fungal outbreaks have occurred, including the high-profile 'Vancouver Island' and 'Pacific Northwest' outbreaks, caused by Cryptococcus gattii, which has affected hundreds of otherwise healthy humans and animals. Over the same time period, C. gattii was the cause of several additional case clusters at localities outside of the tropical and subtropical climate zones where the species normally occurs. In every case, the causative agent belongs to a previously rare genotype of C. gattii called AFLP6/VGII, but the origin of the outbreak clades remains enigmatic. Here we used phylogenetic and recombination analyses, based on AFLP and multiple MLST datasets, and coalescence gene genealogy to demonstrate that these outbreaks have arisen from a highly-recombining C. gattii population in the native rainforest of Northern Brazil. Thus the modern virulent C. gattii AFLP6/VGII outbreak lineages derived from mating events in South America and then dispersed to temperate regions where they cause serious infections in humans and animals.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“All three isolates are characterized by diminished virulence relative to the VGIIa clonal outbreak strains (Fraser et al., 2005; Byrnes et al., 2010; Hagen et al., 2013).”
From Natural mismatch repair mutations mediate phenotypic diversity and drug resistance in Cryptococcus deuterogattii (2017) · cites this paper as Hagen et al., 2013
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Updated world map of the Köppen-Geiger climate classification
(2007) · doi:10.5194/hess-11-1633-2007 · Cited by 13,640
Global trends in emerging infectious diseases
Jones, K. E., Patel, N. G., Levy, M. A., Storeygard, A., Balk, D., Gittleman, J. L., & Daszak, P. (2008) · Nature · doi:10.1038/nature06536 · Cited by 8,338
Climate Warming and Disease Risks for Terrestrial and Marine Biota
Harvell, C. D., Mitchell, C. E., Ward, J. R., Altizer, S., Dobson, A. P., Ostfeld, R. S., & Samuel, M. D. (2002) · Science · doi:10.1126/science.1063699 · Cited by 2,799
The velocity of climate change
Loarie, S. R., Duffy, P. B., Hamilton, H., Asner, G. P., Field, C. B., & Ackerly, D. D. (2009) · Nature · doi:10.1038/nature08649 · Cited by 2,646
Aerial Dispersal of Pathogens on the Global and Continental Scales and Its Impact on Plant Disease
Brown, J. K. M., & Hovmøller, M. S. (2002) · Science · doi:10.1126/science.1072678 · Cited by 1,165
Bat White-Nose Syndrome: An Emerging Fungal Pathogen?
Blehert, D. S., Hicks, A. C., Behr, M. J., Meteyer, C. U., Berlowski-Zier, B. M., Buckles, E. L., Coleman, J. T. H., Darling, S. R., Gargas, A., Niver, R., et al. (2008) · Science · doi:10.1126/science.1163874 · Cited by 1,094
Atmospheric Movement of Microorganisms in Clouds of Desert Dust and Implications for Human Health
Griffin, D. W. (2007) · Clinical Microbiology Reviews · doi:10.1128/cmr.00039-06 · Cited by 824
Kidd, S. E., Hagen, F., Tscharke, R. L., Huynh, M., Bartlett, K. H., Fyfe, M. W., MacDougall, L., Boekhout, T., Kwon-Chung, K. J., & Meyer, W. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0402981101 · Cited by 766
Self-citationNatural habitat of Cryptococcus neoformans var. gattii
Ellis, D. H., & Pfeiffer, T. (1990) · Journal of Clinical Microbiology · doi:10.1128/jcm.28.7.1642-1644.1990 · Cited by 561
Anthropogenic Warming of Earth's Climate System
Levitus, S., Antonov, J. I., Wang, J., Delworth, T. L., Dixon, K. W., & Broccoli, A. J. (2001) · Science · doi:10.1126/science.1058154 · Cited by 543
Flagged first, then by citations
Research works printed but not linked: 1
- Griffiths A (2006) M.Sc. thesis ‘Assessing exposure to Cryptococcus gattii’, University of British Columbia, Vancouver, BC, Canada. Available: https://circle.ubc.ca/handle/2429/17839. Accessed 4 July 2013.
Cited by
Sorted by citations
Items 101–200 of 217
Moreira, I. D. M. B., Cortez, A. C. A., de Souza, É. S., Pinheiro, S. B., de Souza Oliveira, J. G., Sadahiro, A., Cruz, K. S., Matsuura, A. B. J., Melhem, M. D. S. C., Frickmann, H., et al. (2022) · Medical Mycology · doi:10.1093/mmy/myac005 · Cited by 22
Climatic Influences onCryptoccoccus gattiiPopulations, Vancouver Island, Canada, 2002–2004
Uejio, C. K., Mak, S., Manangan, A. P., Luber, G., & Bartlett, K. H. (2015) · Emerging infectious diseases · doi:10.3201/eid2111.141161 · Cited by 22
Self-citationPathogenic diversity amongst serotype C VGIII and VGIV Cryptococcus gattii isolates
Rodrigues, J., Fonseca, F. L., Schneider, R., Godinho, R. M. D. C., Firacative, C., Maszewska, K., Meyer, W., Schrank, A., Staats, C. C., Kmetzsch, L., et al. (2015) · Scientific Reports · doi:10.1038/srep11717 · Cited by 24
Self-citationUse of AFLP for the study of eukaryotic pathogens affecting humans
Restrepo, C. M., Llanes, A., & Lleonart, R. (2017) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2017.09.017 · Cited by 22
Evolutionary Perspectives on Human Fungal PathogensPreprint
Taylor, J. W. (2014) · Cold Spring Harbor Perspectives in Medicine · doi:10.1101/cshperspect.a019588 · Cited by 22
Ashu, E. E., & Xu, J. (2015) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2015.09.019 · Cited by 23
Wasilewski, R., Ubara, E. O., & Klonizakis, M. (2016) · Microvascular Research · doi:10.1016/j.mvr.2016.05.001 · Cited by 21
Determination of helix orientations in a flexible DNA by multi-frequency EPR spectroscopy
Grytz, C. M., Kazemi, S., Marko, A., Čekan, P., Güntert, P., Sigurdsson, S. T., & Prisner, T. F. (2017) · Physical Chemistry Chemical Physics · doi:10.1039/c7cp04997h · Cited by 21
Describing Genomic and Epigenomic Traits Underpinning Emerging Fungal Pathogens
Farrer, R. A., & Fisher, M. C. (2017) · Advances in genetics · doi:10.1016/bs.adgen.2017.09.009 · Cited by 21
Phagosomal F-Actin Retention by Cryptococcus gattii Induces Dendritic Cell Immunoparalysis
Jamil, K., Polyak, M. J., Feehan, D. D., Surmanowicz, P., Stack, D., Li, S. S., Ogbomo, H., Olszewski, M. A., Ganguly, A., & Mody, C. H. (2020) · mBio · doi:10.1128/mbio.01821-20 · Cited by 21
Barcellos, V. A., Martins, L. M. S., Fontes, A. C. L., Reuwsaat, J. C. V., Squizani, E. D., Araújo, G. R. D. S., Frasés, S., Staats, C. C., Schrank, A., Kmetzsch, L., et al. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.00132 · Cited by 22
Reed, R. A., Mitchell, E. S., Saunders, C., & O’Connor, P. J. (2018) · Journal of Cognitive Enhancement · doi:10.1007/s41465-018-0118-8 · Cited by 20
Grochowska, A., Dunaj, J., Pancewicz, S. A., Czupryna, P., Majewski, P., Wondim, M. A., Tryniszewska, E. A., & Moniuszko-Malinowska, A. M. (2021) · Experimental and Applied Acarology · doi:10.1007/s10493-021-00655-x · Cited by 18
Edwards, H. M., Cogliati, M., Kwenda, G., & Fisher, M. C. (2021) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiab093 · Cited by 19
Damasceno-Escoura, A. H., de Souza, M. L., Nunes, F. D. O., Pardi, T. C., Gazotto, F. C., Florentino, D. H., Mora, D. J., & Silva-Vergara, M. L. (2018) · Mycopathologia · doi:10.1007/s11046-018-0304-3 · Cited by 17
Linares, C. E. B., Colom, M. F., Torreblanca, M., Esteban, V., Romera, Á., & Hagen, F. (2015) · Revista Iberoamericana de Micología · doi:10.1016/j.riam.2014.11.002 · Cited by 16
Self-citationCryptococcus and Cryptococcosis in Cuba. A minireview
Zaragozí, M. T. I., Martínez-Machín, G., Andreu, C. F., Lancha, M. R. P., Hagen, F., & Meis, J. F. G. M. (2014) · Mycoses · doi:10.1111/myc.12275 · Cited by 18
Self-citationReduced Symbiodiniaceae diversity in Palythoa tuberculosa at a heavily acidified coral reef
Wee, H. B., Kurihara, H., & Reimer, J. D. (2019) · Coral Reefs · doi:10.1007/s00338-019-01776-x · Cited by 16
Köhler, J. R., Hube, B., Puccia, R., Casadevall, A., & Perfect, J. R. (2017) · ASM Press eBooks · doi:10.1128/9781555819583.ch39 · Cited by 18
Sex and Menstrual Phase Influences on Sleep and Memory
Alonso, A., Genzel, L., & Gómez, A. (2021) · Current Sleep Medicine Reports · doi:10.1007/s40675-020-00201-y · Cited by 15
Epigenetic plasticity and redox regulation of neural stem cell state and fate
Tay, E. X. Y., Chia, K., & Ong, D. S. T. (2021) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2021.02.030 · Cited by 15
Matsuda, J. D. S., Wanke, B., Balieiro, A. A. D. S., Santos, C. S. D. S., Cavalcante, R. C. D. S., Muniz, M. D. M., Torres, D. R., Pinheiro, S. B., Frickmann, H., de Souza, J. V. B., et al. (2021) · Revista Iberoamericana de Micología · doi:10.1016/j.riam.2020.12.004 · Cited by 15
Siqueira, N. P., Favalessa, O. C., Maruyama, F. H., Dutra, V., Nakazato, L., Hagen, F., & Hahn, R. C. (2021) · Mycopathologia · doi:10.1007/s11046-021-00601-w · Cited by 15
Self-citationBauer, M., Wickenhauser, C., Haak, A., Pazaitis, N., Siebolts, U., Mawrin, C., Strauß, C., Rickerts, V., Stoevesandt, D., Cornely, O. A., et al. (2018) · JMM Case Reports · doi:10.1099/jmmcr.0.005168 · Cited by 15
Self-citationHigh genetic variability of clinical and environmental Cryptococcus gattii isolates from Brazil
Vilas-Boas, A., Andrade-Silva, L. E., Paim, K. F., Mora, D. J., Ferreira, T. B., Santos, D. A., Borges, A. S., Melhem, M. D. S. C., & Silva-Vergara, M. L. (2020) · Medical Mycology · doi:10.1093/mmy/myaa019 · Cited by 15
Cryptococcus gattii VGII in a Plathymenia reticulata hollow in Cuiabá, Mato Grosso, Brazil
Anzai, M. C., Lazéra, M. D. S., Wanke, B., Trilles, L., Dutra, V., de Paula, D. A. J., Nakazato, L., Takahara, D. T., Simi, W. B., & Hahn, R. C. (2014) · Mycoses · doi:10.1111/myc.12177 · Cited by 15
Widespread Foodborne Cyclosporiasis Outbreaks Present Major Challenges
Colley, D. G. (1996) · Emerging infectious diseases · doi:10.3201/eid0204.960413 · Cited by 15
Nishikawa, M. M., Almeida‐Paes, R., Brito‐Santos, F., do Nascimento, C. R. S., Fialho, M. M., Trilles, L., Morales, B. P., da Silva, S. A., Santos, W., Santos, L. O., et al. (2018) · Medical Mycology · doi:10.1093/mmy/myy150 · Cited by 14
Pathogen and host genetics underpinning cryptococcal disease
Coelho, C., & Farrer, R. A. (2020) · Advances in genetics · doi:10.1016/bs.adgen.2020.02.001 · Cited by 14
Xiao, Y., Zhao, H., Yang, W., Qing, H., Zhou, C., Tang, J., & An, S. (2014) · CLEAN - Soil Air Water · doi:10.1002/clen.201300868 · Cited by 14
González, G. M., Casillas-Vega, N. G., Garza‐González, E., Hernández‐Bello, R., Rivera, G., Rodríguez, J. Á., & Bocanegra‐García, V. (2015) · Folia Microbiologica · doi:10.1007/s12223-015-0409-8 · Cited by 14
Favalessa, O. C., Lazéra, M. D. S., Wanke, B., Trilles, L., Takahara, D. T., Tadano, T., Dias, L. B., Vieira, A. C., Novack, G. V., & Hahn, R. C. (2014) · Mycoses · doi:10.1111/myc.12210 · Cited by 15
Chamberland, M. E., Epstein, J. S., Dodd, R. Y., Persing, D. H., Will, R. G., DeMaria, A., Emmanuel, J., Pierce, B., & KHABBAZ, R. F. (1998) · Emerging infectious diseases · doi:10.3201/eid0403.980317 · Cited by 14
Landscape Ecology: Linking Landscape Metrics to Ecological Processes
Robinson, H. S., & Weckworth, B. (2016) · Elsevier eBooks · doi:10.1016/b978-0-12-802213-9.00029-8 · Cited by 13
Hernandez-Gomez, M. C., Runavot, J.-L., Meulewaeter, F., & Knox, J. P. (2017) · BMC Plant Biology · doi:10.1186/s12870-017-1017-3 · Cited by 13
Goodla, L., Manubolu, M., Pathakoti, K., & Poondamalli, P. R. (2017) · Egyptian Journal of Basic and Applied Sciences · doi:10.1016/j.ejbas.2017.10.004 · Cited by 13
Rapid genome-wide sequence typing of African swine fever virus based on alleles
Xiong, D., Zhang, X., Xiong, J., Yu, J., & Wei, H. (2021) · Virus Research · doi:10.1016/j.virusres.2021.198357 · Cited by 13
Genetic Diversity of the Cryptococcus gattii Species Complex in Mato Grosso State, Brazil
Maruyama, F. H., de Paula, D. A. J., Menezes, I. D. G., Favalessa, O. C., Hahn, R. C., de Almeida, A. D. B. P. F., Sousa, V. R. F., Nakazato, L., & Dutra, V. (2019) · Mycopathologia · doi:10.1007/s11046-018-0313-2 · Cited by 13
Colliding Epidemics and the Rise of Cryptococcosis
Chang, C. C., & Chen, S. C.-J. (2015) · Journal of Fungi · doi:10.3390/jof2010001 · Cited by 14
Talavera-Aguilar, L. G., Murrieta, R. A., Kiem, S., Cetina-Trejo, R. C., Baak‐Baak, C. M., Ebel, G. D., Blitvich, B. J., & Machaín-Williams, C. (2021) · Parasites & Vectors · doi:10.1186/s13071-021-04726-1 · Cited by 12
Hagen, F., Chowdhary, A., Prakash, A., Yntema, J.-B. L., & Meis, J. F. G. M. (2014) · Revista Iberoamericana de Micología · doi:10.1016/j.riam.2013.10.007 · Cited by 12
Self-citationProteinuria can predict prognosis after liver transplantation
Pan, H., Chen, Y.-J., Lin, J.-P., Tsai, M. F., Jenq, C., Lee, W., Tsai, M.-H., Fan, P., Chang, M., Chang, M.-Y., et al. (2016) · BMC Surgery · doi:10.1186/s12893-016-0176-8 · Cited by 12
Teh, Y. M., Lim, S. K., Jusoh, N., Osman, K., & Mualif, S. A. (2021) · BioMed Research International · doi:10.1155/2021/6671552 · Cited by 12
Kangogo, M., Boga, H. I., Wanyoike, W., & Bii, C. C. (2014) · PubMed · Cited by 12
Sex and age-related social organization in the Neolithic: A promising survey from the Paris Basin
Rey, L., Rottier, S., Santos, F., & Goude, G. (2021) · Journal of Archaeological Science Reports · doi:10.1016/j.jasrep.2021.103092 · Cited by 11
Hitchcock, M., & Xu, J. (2023) · Journal of Fungi · doi:10.3390/jof9020276 · Cited by 12
Swe, T., Miles, C. O., Cerasino, L., Mjelde, M., Kleiven, S., & Ballot, A. (2021) · Limnologica · doi:10.1016/j.limno.2021.125901 · Cited by 11
Discovery of a sexual cycle in Talaromyces amestolkiae
Yılmaz, N., Hagen, F., Meis, J. F. G. M., Houbraken, J. A. M. P., & Samson, R. A. (2016) · Mycologia · doi:10.3852/15-014 · Cited by 10
Self-citationPiechnik, C. A., Höckner, M., de Souza, M. R. D. P., Donatti, L., & Tomanek, L. (2016) · Journal of Proteomics · doi:10.1016/j.jprot.2016.04.036 · Cited by 10
First case of disseminated cryptococcosis in aGorilla gorilla
Mischnik, A., Stockklausner, J., Hohneder, N., Jensen, H. E., Zimmermann, S., Reuß, D., Rickerts, V., Tintelnot, K., & Stockklausner, C. (2014) · Mycoses · doi:10.1111/myc.12215 · Cited by 10
Lockhart, S. R., McCotter, O. Z., & Chiller, T. M. (2016) · Microbiology Spectrum · doi:10.1128/microbiolspec.ei10-0016-2016 · Cited by 11
Kinne, J., Joseph, M., Wernery, U., Nógrádi, N., & Hagen, F. (2017) · Revista Iberoamericana de Micología · doi:10.1016/j.riam.2017.02.007 · Cited by 10
Self-citationBursztyka, P., Lafont‐Lecuelle, C., Teruel, E., Leclercq, J., Brin, A., & Pageat, P. (2016) · Journal of Molluscan Studies · doi:10.1093/mollus/eyv068 · Cited by 9
Bulger, D., Volpe, J. P., & Fisher, J. T. (2019) · Marine Environmental Research · doi:10.1016/j.marenvres.2019.104788 · Cited by 9
Gene, virulence and related regulatory mechanisms in Cryptococcus gattii
Huang, Y., Zang, X., Yang, C., Deng, H., Ma, X., Xie, M., Zhou, M., Song, J., & Xue, X. (2022) · Acta Biochimica et Biophysica Sinica · doi:10.3724/abbs.2022029 · Cited by 9
Changes in Laminin Expression Pattern during Early Differentiation of Human Embryonic Stem Cells
Pook, M., Teino, I., Kallas, A., Maimets, T., Ingerpuu, S., & Jaks, V. (2015) · PLoS ONE · doi:10.1371/journal.pone.0138346 · Cited by 8
Effect of tea root-derived proanthocyanidin fractions on protection of dentin collagen
Yang, H., Xie, B., Wang, Y., Cui, Y., Yang, H., Wang, X., Yang, X., & Bao, G. (2019) · Journal of International Medical Research · doi:10.1177/0300060519891303 · Cited by 8
Guo, S.-H., Liu, Y. ‐., Wang, Z., Wang, F., Mao, Y. ‐., Hu, Y. ‐., Han, P., Cuthbertson, A. G. S., Qiu, B., & Sang, W. (2021) · Insect Molecular Biology · doi:10.1111/imb.12693 · Cited by 8
Sources of Fungal Genetic Variation and Associating It with Phenotypic Diversity
Taylor, J. W., Branco, S., Gao, C. D., Hann-Soden, C., Montoya, L., Sylvain, I., & Gladieux, P. (2017) · ASM Press eBooks · doi:10.1128/9781555819583.ch30 · Cited by 8
Maufrais, C., de Oliveira, L. M., Bastos, R. W., Moyrand, F., Reis, F. C. G., Valero, C., Gimenez, B., Jozefowicz, L. J., Goldman, G. H., Rodrigues, M. L., et al. (2021) · G3 Genes Genomes Genetics · doi:10.1093/g3journal/jkab107 · Cited by 8
Cryptococcus and Cryptococcosis
Godinho, R. M. D. C., Oliveira, D. L., Albuquerque, P. C., Dutra, F. F., Almeida‐Paes, R., Rodrigues, M. L., & Fonseca, F. L. (2017) · Springer eBooks · doi:10.1007/978-3-319-64113-3_6 · Cited by 8
Mathewes, R. W., Archibald, S. B., & Lundgren, A. (2021) · Review of Palaeobotany and Palynology · doi:10.1016/j.revpalbo.2021.104480 · Cited by 7
Decoding Cryptococcus: From African biodiversity to worldwide prevalence
Coelho, M. A., Palma, M. D., Aylward, J., Pham, N. Q., Visagie, C. M., Fuchs, T., Yılmaz, N., Roets, F., Sun, S., Taylor, J. W., et al. (2025) · PLoS Pathogens · doi:10.1371/journal.ppat.1012876 · Cited by 8
Boissin, É., Neglia, V., Baksay, S., Micu, D., Bat, L., Topaloğlu, B., Тодорова, В., Panayotova, M., Kruschel, C., Афанасьевна, М. Н., et al. (2020) · Scientific Reports · doi:10.1038/s41598-020-77742-3 · Cited by 7
Immunoreactivity of Synthetic Peptides Derived from Proteins of Cryptococcus Gattii
Brandão, R. M. S. D. S., Martins, L. M. S., de Andrade, H. M., Faria, A. R., Leal, M. J. S., da Silva, A. S., Wanke, B., Lazéra, M. D. S., Vainstein, M. H., Mendes, R. P., et al. (2014) · Future Microbiology · doi:10.2217/fmb.14.49 · Cited by 8
Khayhan, K., Hagen, F., Norkaew, T., Puengchan, T., Boekhout, T., & Sriburee, P. (2017) · Mycopathologia · doi:10.1007/s11046-016-0067-7 · Cited by 7
Self-citationAD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data
Schaefer, N. K., Shapiro, B., & Green, R. E. (2017) · BMC Bioinformatics · doi:10.1186/s12859-017-1613-0 · Cited by 8
International Society for Human and Animal Mycology (ISHAM)—New Initiatives
Chakrabarti, A., Meis, J. F. G. M., & Cornely, O. A. (2020) · Journal of Fungi · doi:10.3390/jof6030097 · Cited by 7
Self-citationBellet, V., Roger, F., Krasteva, D., Gouveia, T., Drakulovski, P., Pottier, C. P., & Bertout, S. (2021) · Mycoses · doi:10.1111/myc.13389 · Cited by 7
Central Nervous System Cryptococcosis due to Cryptococcus gattii in the Tropics
Lizarazo, J., & Castañeda, E. (2022) · Current Tropical Medicine Reports · doi:10.1007/s40475-022-00253-w · Cited by 7
Self-citationPresence of pathogenic cryptococci on trees situated in two recreational areas in South Africa
Vreulink, J.-M., Khayhan, K., Hagen, F., Botes, A., Moller, L., Boekhout, T., Vismer, H. F., & Botha, A. (2017) · Fungal ecology · doi:10.1016/j.funeco.2017.09.005 · Cited by 7
Self-citationJimenez, I. A., Stempinski, P. R., Dragotakes, Q., Greengo, S. D., Ramirez, L. S., & Casadevall, A. (2024) · mSphere · doi:10.1128/msphere.00848-24 · Cited by 6
A constrained wavelet smoother for pathway identification tasks in systems biology
Dolatshahi, S., Vidaković, B., & Voit, E. O. (2014) · Computers & Chemical Engineering · doi:10.1016/j.compchemeng.2014.07.019 · Cited by 6
Panasevich, E. A., & Tsitseroshin, M. N. (2015) · Human Physiology · doi:10.1134/s0362119715050114 · Cited by 6
Engelthaler, D. M., & Meyer, W. (2017) · mSphere · doi:10.1128/msphere.00241-17 · Cited by 6
Self-citationVirulence profiling of Cryptococcus gattii isolates in China: insights from a multi-center study
Zang, X., Ke, W., Huang, Y., Yang, C., Song, J., Deng, H., Zhou, M., Wang, Q., Zhou, Y., Dai, B., et al. (2023) · Microbiology Spectrum · doi:10.1128/spectrum.02443-23 · Cited by 6
Lin, K., Lin, Y., Ho, M., Chen, Y., & Chung, W. (2020) · Mycoses · doi:10.1111/myc.13195 · Cited by 5
You, M., & Xu, J. (2021) · Journal of Fungi · doi:10.3390/jof7040299 · Cited by 5
Assy, J. G. P. L., Said, R. D. C., Berretta, O. C. P., Brandão, A. D. S., Boulware, D. R., França, F. O. D. S., & Vidal, J. E. (2021) · Medical Mycology · doi:10.1093/mmy/myab021 · Cited by 5
Francisco, E. C., Fernández, N., Carbia, M., Dieleman, C., Bostănaru, A.-C., Houbraken, J. A. M. P., Colombo, A. L., & Hagen, F. (2025) · Emerging infectious diseases · doi:10.3201/eid3109.241929 · Cited by 4
Self-citationMorales, B. P., Trilles, L., Bertho, Á. L., Neves, I., de Oliveira, R. D. V. C., Wanke, B., & Lazéra, M. D. S. (2015) · Mycoses · doi:10.1111/myc.12310 · Cited by 4
Alfouzan, W. A., Al‐Sheridah, S., Alenzi, L., Hagen, F., Meis, J. F. G. M., & Khan, Z. (2015) · JMM Case Reports · doi:10.1099/jmmcr.0.000058 · Cited by 4
Self-citationComparative genomics analysis of c-di-GMP metabolism and regulation in Microcystis aeruginosa
Chen, M., Xu, C.-Y., Wang, X., Ren, C., Ding, J., & Li, L. (2020) · BMC Genomics · doi:10.1186/s12864-020-6591-3 · Cited by 4
Rhodes, J. L., Desjardins, C. A., Sykes, S. M., Beale, M. A., Vanhove, M., Sakthikumar, S., Chen, Y., Gujja, S., Saif, S., Chowdhary, A., et al. (2017) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/132894 · Cited by 4
Self-citationUpper Respiratory Tract of the Dog and Cat
Beeler‐Marfisi, J., Defarges, A. M. N., & Bienzle, D. (2020) · Wiley eBooks · doi:10.1002/9781119380559.ch24 · Cited by 4
Lin, K., Lai, Y., Lin, Y., Ho, M., Chen, Y., & Chung, W. (2022) · Mycoses · doi:10.1111/myc.13520 · Cited by 3
The mid-Cretaceous debate: Evidence from the foraminifera
Hart, M. B. (2021) · Cretaceous Research · doi:10.1016/j.cretres.2021.104964 · Cited by 3
Firacative, C., Paim, K. F., Trilles, L., Engelthaler, D. M., & Meyer, W. (2015) · Microbiology Australia · doi:10.1071/ma15023 · Cited by 3
Self-citationTaverna, C. G., Arias, B. A., Firacative, C., Vivot, M. E., Szusz, W., Vivot, W., Mazza, M., Córdoba, S. B., & Canteros, C. E. (2023) · Mycopathologia · doi:10.1007/s11046-022-00705-x · Cited by 3
Timing the Origin ofCryptococcus gattiisensu stricto, Southeastern United States
Lockhart, S. R., Roe, C. C., & Engelthaler, D. M. (2018) · Emerging infectious diseases · doi:10.3201/eid2411.180975 · Cited by 3
Evaluation of the Most Harmful Malicious Attacks in Power Systems Based on a New Set of Centralities
J.Albarakati, A. (2021) · Journal of Electrical Engineering and Technology · doi:10.1007/s42835-021-00743-3 · Cited by 3
Criptococose gattii: Uma revisão de literatura
Filho, E. B. D. S., & Franciscato, C. S. (2025) · Research Society and Development · doi:10.33448/rsd-v14i8.49248 · Cited by 2
A Model CNS Fungal Infection: Cryptococcal Meningitis
Beardsley, J., Thanh, L. T., & Day, J. (2015) · Current Clinical Microbiology Reports · doi:10.1007/s40588-015-0016-0 · Cited by 2
Unstable Protein Purification Through the Formation of Stable Complexes
Eiler, S., Levy, N., Maillot, B., Batisse, J., Pradeau‐Aubreton, K., Oladosu, O., & Ruff, M. (2018) · Methods in molecular biology · doi:10.1007/978-1-4939-7759-8_20 · Cited by 2
de Carvalho, J. A., Hagen, F., Bonifáz, A., Kano, R., Camargo, Z. P. D., & Rodrigues, A. M. (2025) · Fungal Biology · doi:10.1016/j.funbio.2025.101566 · Cited by 2
Self-citationMolecular characterization of Cryptococcus neoformans isolates from HIV patients, Guayaquil, Ecuador
Sánchez, S., Zambrano-Castro, D., García, M., Pilozo, C. B., Fernández, C., & Zaragozí, M. T. I. (2017) · Biomédica · doi:10.7705/biomedica.v37i3.3322 · Cited by 2
Rudnik, C. R. B., Alves, J. F., Merlos, P. G. C., & Lima, H. D. N. (2020) · Revista de Epidemiologia e Controle de Infecção · doi:10.17058/jeic.v10i3.15283 · Cited by 2
Yang, C., Zhou, Y., Zhong, Y., Wang, L., Zang, X., Chen, H., Shen, D., Cheng, Y. Z., Gu, J., & Xue, X. (2025) · Annals of the New York Academy of Sciences · doi:10.1111/nyas.15328 · Cited by 1
Zancopé‐Oliveira, R. M., Paes, R. D. A., & Hagen, F. (2015) · Elsevier eBooks · doi:10.1016/b978-0-12-411471-5.00011-9 · Cited by 1
Self-citationJúnior, D. P. L., da Costa, G. L., Dantas, E. S. D. O., Nascimento, D. C., Moreira, D., Pereira, R. S., Ramos, R. T. B., Bonci, M. M., Maia, M. L. D. S., Gandra, R. F., et al. (2020) · Microbiology Research Journal International · doi:10.9734/mrji/2020/v30i1030272 · Cited by 1
Metadata
- Authors
- Hagen, F., Ceresini, P. C., Polacheck, I., Ma, H., Nieuwerburgh, F. V., Gabaldón, T., Kagan, S., Pursall, E. R., Hoogveld, H. L., van Iersel, L. J. J., Klau, G. W., Kelk, S. M., Stougie, L., Bartlett, K. H., Voelz, K., Pryszcz, L. P., Castañeda, E., Lazera, M., Meyer, W., Deforce, D., Meis, J. F., May, R. C., Klaassen, C. H. W., & Boekhout, T.
- Affiliations
- Westerdijk Fungal Biodiversity Institute (NL)
- Universidade Estadual Paulista (Unesp) (BR)
- Hadassah Medical Center (IL)
- University of Birmingham (GB)
- Ghent University (BE)
- Centre for Genomic Regulation (ES)
- Netherlands Institute of Ecology (NL)
- Centrum Wiskunde & Informatica (NL)
- University of British Columbia (CA)
- Instituto Nacional de Salud (CO)
- The University of Sydney (AU)
- Radboud University Medical Center (NL)
- Canisius-Wilhelmina Ziekenhuis (NL)
- Second Military Medical University (CN)
- Corresponding author
- Boekhout, Teun
- ORCID
- Hagen, Ferry
- Ceresini, Paulo C.
- Polacheck, Itzhack
- Ma, Hansong
- Nieuwerburgh, Filip van
- Gabaldón, Toni
- Klau, Gunnar W.
- Kelk, Steven M.
- Stougie, Leen
- Bartlett, Karen H.
- Voelz, Kerstin
- Pryszcz, Leszek P.
- Castañeda, Elizabeth
- Meyer, Wieland
- Deforce, Dieter
- Meis, Jacques F.
- May, Robin C.
- Klaassen, Corné H. W.
- Boekhout, Teun
- Venue
- PLoS ONE
- Publisher
- Public Library of Science (PLoS)
- Published
- 2013-08-07
- Volume
- 8
- Issue
- 8
- Pages
- e71148
- ISSN
- 1932-6203 (ISSN-L)
- PMC
- PMC3737135
- OpenAlex
- W2152772772
- Cited by
- 218
- References
- 42
- Citations by year
- 2026: 1 · 2025: 5 · 2024: 4 · 2023: 6 · 2022: 4 · 2021: 28 · 2020: 18 · 2019: 14 · 2018: 19 · 2017: 33 · 2016: 21 · 2015: 27 · 2014: 30 · 2013: 4
- FWCI
- 19.92
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- PLoS ONE (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Americanae (AECID Library) (publishedVersion, other-oa)
- KNAW research portal (Royal Academy of Art and Sciences (KNAW)) (publishedVersion, cc-by)
- KNAW Research Portal (The Royal Netherlands Academy of Arts and Sciences) (publishedVersion, cc-by)
- RECERCAT (Consorci de Serveis Universitaris de Catalunya) (publishedVersion, other-oa)
- VU Research Portal (publishedVersion, other-oa)
- Ghent University Academic Bibliography (Ghent University) (submittedVersion, other-oa)
- Centrum Wiskunde & Informatica (CWI), the national research institute for mathematics and computer science in the Netherlands (submittedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion, other-oa)
- Data Archiving and Networked Services (DANS) (submittedVersion, cc-by)
- Acervo Digital da Universidade Estadual Paulista (Universidade Estadual Paulista) (submittedVersion, other-oa)
- Research Publications (Maastricht University) (submittedVersion, cc-by)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Figshare (submittedVersion, cc-by)
- University of Birmingham Research Portal (University of Birmingham) (submittedVersion, other-oa)
- Repositori digital de la UPF (Universitat Pompeu Fabra) (submittedVersion, cc-by)
- LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Científicas) (submittedVersion, other-oa)
- Radboud Repository (Radboud University) (submittedVersion)
- Apollo (University of Cambridge) (submittedVersion, cc-by)
- Radboud Repository (Radboud University) (submittedVersion, other-oa)
- Research Publications (Maastricht University) (submittedVersion, other-oa)
- Apollo (cc-by)
- Funders
- Qatar Foundation
- Fonds National de la Recherche Luxembourg
- Nederlandse Organisatie voor Wetenschappelijk Onderzoek
- Qatar National Research Fund
- Topics
- Health Sciences › Medicine › Infectious Diseases › Fungal Infections and Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Pathogens and Fungal Diseases
- Keywords
- Cryptococcus gattii, fungal outbreak, human fungal infections, Amazon rainforest, population dispersal, recombination, phylogenetics, multilocus sequence typing, Northern Brazil, fungal genotypes
- MeSH terms
- Animals, Brazil, British Columbia, Cells, Cultured, Cryptococcosis, Disease Outbreaks, Genes, Fungal, Humans, Macrophages, Mice, Inbred BALB C, Molecular Sequence Data, Phylogeny, Polymorphism, Restriction Fragment Length, Trees, Tropical Climate, Virulence, Northwestern United States, Likelihood Functions, Mycological Typing Techniques, Mice, Cryptococcus gattii, Multilocus Sequence Typing
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review