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VMP1 Establishes ER-Microdomains that Regulate Membrane Contact Sites and Autophagy

Tábara, Luis-Carlos, Escalante, Ricardo·2016·PLOS ONE
DOI 10.1371/journal.pone.0166499PMC PMC5115753
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Research works printed but not linked: 41

  1. MJ Phillips, 2016, Structure and function of ER membrane contact sites with other organelles, Nature reviews Molecular cell biology, 17, 69, 10.1038/nrm.2015.8 · DOI · Paper page
  2. ER Eden, 2016, The formation and function of ER-endosome membrane contact sites, Biochimica et biophysica acta, 1861, 874, 10.1016/j.bbalip.2016.01.020 · DOI
  3. WA Prinz, 2014, Bridging the gap: membrane contact sites in signaling, metabolism, and organelle dynamics, The Journal of cell biology, 205, 759, 10.1083/jcb.201401126 · DOI
  4. M Hayashi-Nishino, 2010, Electron tomography reveals the endoplasmic reticulum as a membrane source for autophagosome formation, Autophagy, 6, 301, 10.4161/auto.6.2.11134 · DOI
  5. T Uemura, 2014, A cluster of thin tubular structures mediates transformation of the endoplasmic reticulum to autophagic isolation membrane, Mol Cell Biol, 34, 1695, 10.1128/MCB.01327-13 · DOI
  6. MI Wilson, 2014, WIPI2b and Atg16L1: setting the stage for autophagosome formation, Biochemical Society transactions, 42, 1327, 10.1042/BST20140177 · DOI
  7. HC Dooley, 2014, WIPI2 links LC3 conjugation with PI3P, autophagosome formation, and pathogen clearance by recruiting Atg12-5-16L1, Molecular cell, 55, 238, 10.1016/j.molcel.2014.05.021 · DOI
  8. L Ge, 2014, The ER-Golgi intermediate compartment feeds the phagophore membrane, Autophagy, 10, 170, 10.4161/auto.26787 · DOI
  9. C Puri, 2014, ATG16L1 meets ATG9 in recycling endosomes: additional roles for the plasma membrane and endocytosis in autophagosome biogenesis, Autophagy, 10, 182, 10.4161/auto.27174 · DOI
  10. A van der Vaart, 2010, The Golgi complex as a source for yeast autophagosomal membranes, Autophagy, 6, 800, 10.4161/auto.6.6.12575 · DOI
  11. M Hamasaki, 2013, Autophagosomes form at ER-mitochondria contact sites, Nature, 495, 389, 10.1038/nature11910 · DOI · Paper page
  12. AP Velazquez, 2016, Lipid droplet-mediated ER homeostasis regulates autophagy and cell survival during starvation, The Journal of cell biology, 212, 621, 10.1083/jcb.201508102 · DOI
  13. T Shpilka, 2015, Lipid droplets and their component triglycerides and steryl esters regulate autophagosome biogenesis, The EMBO journal, 34, 2117, 10.15252/embj.201490315 · DOI
  14. L Murrow, 2015, ATG12-ATG3 interacts with Alix to promote basal autophagic flux and late endosome function, Nature cell biology, 17, 300, 10.1038/ncb3112 · DOI
  15. M Graef, 2013, ER exit sites are physical and functional core autophagosome biogenesis components, Molecular Biology of the Cell, 24, 2918, 10.1091/mbc.E13-07-0381 · DOI
  16. J Sanchez-Wandelmer, 2015, ERES: sites for autophagosome biogenesis and maturation?, Journal of cell science, 15, 185, 10.1242/jcs.158758 · DOI
  17. J Biazik, 2015, Ultrastructural relationship of the phagophore with surrounding organelles, Autophagy, 11, 439, 10.1080/15548627.2015.1017178 · DOI · Paper page
  18. J Calvo-Garrido, 2008, Vacuole membrane protein 1 is an endoplasmic reticulum protein required for organelle biogenesis, protein secretion, and development, Mol Biol Cell, 19, 3442, 10.1091/mbc.E08-01-0075 · DOI
  19. P Wang, 2011, KMS1 and KMS2, two plant endoplasmic reticulum proteins involved in the early secretory pathway, The Plant journal: for cell and molecular biology, 66, 613, 10.1111/j.1365-313X.2011.04522.x · DOI
  20. E Itakura, 2010, Characterization of autophagosome formation site by a hierarchical analysis of mammalian Atg proteins, Autophagy, 6, 764, 10.4161/auto.6.6.12709 · DOI · Paper page
  21. C Kishi-Itakura, 2014, Ultrastructural analysis of autophagosome organization using mammalian autophagy-deficient cells, Journal of cell science, 127, 4089, 10.1242/jcs.156034 · DOI
  22. Y Tian, 2010, C. elegans screen identifies autophagy genes specific to multicellular organisms, Cell, 141, 1042, 10.1016/j.cell.2010.04.034 · DOI · Paper page
  23. J Calvo-Garrido, 2010, Autophagy dysfunction and ubiquitin-positive protein aggregates in Dictyostelium cells lacking Vmp1, Autophagy, 6, 100, 10.4161/auto.6.1.10697 · DOI
  24. J Calvo-Garrido, 2014, Vmp1 Regulates PtdIns3P Signaling During Autophagosome Formation in Dictyostelium discoideum, Traffic, 15, 1235, 10.1111/tra.12210 · DOI
  25. H Tenenboim, 2014, VMP1-deficient Chlamydomonas exhibits severely aberrant cell morphology and disrupted cytokinesis, BMC Plant Biol, 14, 121, 10.1186/1471-2229-14-121 · DOI
  26. AK Velikkakath, 2012, Mammalian Atg2 proteins are essential for autophagosome formation and important for regulation of size and distribution of lipid droplets, Molecular Biology of the Cell, 23, 896, 10.1091/mbc.E11-09-0785 · DOI
  27. MJ Wozniak, 2009, Role of kinesin-1 and cytoplasmic dynein in endoplasmic reticulum movement in VERO cells, Journal of cell science, 122, 1979, 10.1242/jcs.041962 · DOI
  28. S Hoepfner, 2005, Modulation of receptor recycling and degradation by the endosomal kinesin KIF16B, Cell, 121, 437, 10.1016/j.cell.2005.02.017 · DOI
  29. G Drin, 2010, Amphipathic helices and membrane curvature, FEBS letters, 584, 1840, 10.1016/j.febslet.2009.10.022 · DOI
  30. LM Westrate, 2015, Form follows function: the importance of endoplasmic reticulum shape, Annual review of biochemistry, 84, 791, 10.1146/annurev-biochem-072711-163501 · DOI
  31. M Giacomello, 2016, The coming of age of the mitochondria-ER contact: a matter of thickness, Cell death and differentiation, 23, 1417, 10.1038/cdd.2016.52 · DOI
  32. I Koyama-Honda, 2013, Temporal analysis of recruitment of mammalian ATG proteins to the autophagosome formation site, Autophagy, 9, 1491, 10.4161/auto.25529 · DOI
  33. GP Otto, 2003, Macroautophagy is required for multicellular development of the social amoeba Dictyostelium discoideum, J Biol Chem, 278, 17636, 10.1074/jbc.M212467200 · DOI · Paper page
  34. A Grippa, 2015, The seipin complex Fld1/Ldb16 stabilizes ER-lipid droplet contact sites, The Journal of cell biology, 211, 829, 10.1083/jcb.201502070 · DOI
  35. HT McMahon, 2015, Membrane curvature at a glance, Journal of cell science, 128, 1065, 10.1242/jcs.114454 · DOI
  36. J Calvo-Garrido, 2008, Vacuole membrane protein 1, autophagy and much more, Autophagy, 4, 835, 10.4161/auto.6574 · DOI
  37. V Starkuviene, 2004, High-content screening microscopy identifies novel proteins with a putative role in secretory membrane traffic, Genome Res, 14, 1948, 10.1101/gr.2658304 · DOI
  38. C Rabouille, 2006, TANGOing along the protein secretion pathway, Genome biology, 7, 213, 10.1186/gb-2006-7-4-213 · DOI
  39. MI Molejon, 2013, The VMP1-Beclin 1 interaction regulates autophagy induction, Sci Rep, 3, 1055, 10.1038/srep01055 · DOI
  40. P Cosson, 2012, Mitofusin-2 independent juxtaposition of endoplasmic reticulum and mitochondria: an ultrastructural study, PLoS ONE, 7, e46293, 10.1371/journal.pone.0046293 · DOI
  41. DW Hailey, 2010, Mitochondria supply membranes for autophagosome biogenesis during starvation, Cell, 141, 656, 10.1016/j.cell.2010.04.009 · DOI

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Metadata

Authors
Tábara, L.-C., & Escalante, R.
ORCID
Escalante, Ricardo
Venue
PLOS ONE
Publisher
Public Library of Science (PLoS)
Published
2016-11-18
Volume
11
Issue
11
Pages
e0166499
ISSN
1932-6203
DOI
10.1371/journal.pone.0166499
PMC
PMC5115753
Cited by
89
References
2
Language
en
Licence
creativecommons.org/licenses/by/4.0/ (vor)
Funders
MINECO (BFU2015-64440-P)

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