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Global Mapping of the Yeast Genetic Interaction Network

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Exploration of the Function and Organization of the Yeast Early Secretory Pathway through an Epistatic Miniarray Profile

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Exploration of Essential Gene Functions via Titratable Promoter Alleles

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The Transcription Factor Associated Ccr4 and Caf1 Proteins Are Components of the Major Cytoplasmic mRNA Deadenylase in Saccharomyces cerevisiae

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The TOR and EGO Protein Complexes Orchestrate Microautophagy in Yeast

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Aconitase Couples Metabolic Regulation to Mitochondrial DNA Maintenance

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Starvation Induces Vacuolar Targeting and Degradation of the Tryptophan Permease in Yeast

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Role for Drs2p, a P-Type Atpase and Potential Aminophospholipid Translocase, in Yeast Late Golgi Function

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Cdc50p, a Protein Required for Polarized Growth, Associates with the Drs2p P-Type ATPase Implicated in Phospholipid Translocation inSaccharomyces cerevisiae

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Classification of all putative permeases and other membrane plurispanners of the major facilitator superfamily encoded by the complete genome of Saccharomyces cerevisiae

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Exploration of the Effects of High Hydrostatic Pressure on Microbial Growth, Physiology and Survival: Perspectives from Piezophysiology

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Tryptophan Permease Gene TAT2 Confers High-Pressure Growth in Saccharomyces cerevisiae

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Phosphatidylinositol-4-phosphate 5-Kinase Localized on the Plasma Membrane Is Essential for Yeast Cell Morphogenesis

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A Complex Containing RNA Polymerase II, Paf1p, Cdc73p, Hpr1p, and Ccr4p Plays a Role in Protein Kinase C Signaling

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Genome‐wide lethality screen identifies new PI4,5P2 effectors that regulate the actin cytoskeleton

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Plc1p, Arg82p, and Kcs1p, Enzymes Involved in Inositol Pyrophosphate Synthesis, Are Essential for Phosphate Regulation and Polyphosphate Accumulation in Saccharomyces cerevisiae

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Regulatory Mechanisms Controlling Expression of the <i>DAN</i>/<i>TIR</i> Mannoprotein Genes During Anaerobic Remodeling of the Cell Wall in <i>Saccharomyces cerevisiae</i>

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Roles for the Drs2p–Cdc50p Complex in Protein Transport and Phosphatidylserine Asymmetry of the Yeast Plasma Membrane

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Pressure-Induced Differential Regulation of the Two Tryptophan Permeases Tat1 and Tat2 by Ubiquitin Ligase Rsp5 and Its Binding Proteins, Bul1 and Bul2

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Yeast Ribosomal Protein L24 Affects the Kinetics of Protein Synthesis and Ribosomal Protein L39 Improves Translational Accuracy, While Mutants Lacking Both Remain Viable

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A global genetic interaction network maps a wiring diagram of cellular function

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Biotechnology under high pressure: applications and implications

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Mechanistic role of ergosterol in membrane rigidity and cycloheximide resistance in Saccharomyces cerevisiae

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Identification and analysis of metabolite production with biotechnological potential in Xanthophyllomyces dendrorhous isolates

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Function and regulation of yeast genes involved in higher alcohol and ester metabolism during beverage fermentation

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Fluconazole Modulates Membrane Rigidity, Heterogeneity, and Water Penetration into the Plasma Membrane in <i>Saccharomyces cerevisiae</i>

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The Rpd3L HDAC complex is essential for the heat stress response in yeast

Ruiz‐Roig, C., Viéitez, C., Posas, F., & de Nadal, E. (2010) · Molecular Microbiology · doi:10.1111/j.1365-2958.2010.07167.x · Cited by 81 · see citing works

A genome-wide perspective on the response and tolerance to food-relevant stresses in Saccharomyces cerevisiae

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Phenol degradation and heavy metal tolerance of Antarctic yeasts

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Genome-wide identification of the Fermentome; genes required for successful and timely completion of wine-like fermentation by Saccharomyces cerevisiae

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Heavy metal tolerance in the psychrotolerant Cryptococcus sp. isolated from deep‐sea sediments of the Central Indian Basin

Singh, P., Raghukumar, C., Parvatkar, R. R., & Mascarenhas‐Pereira, M. B. L. (2013) · Yeast · doi:10.1002/yea.2943 · Cited by 47 · see citing works

Control of Protein and Sterol Trafficking by Antagonistic Activities of a Type IV P-type ATPase and Oxysterol Binding Protein Homologue

Muthusamy, B.-P., Raychaudhuri, S., Natarajan, P., Abe, F., Liu, K., Prinz, W. A., & Graham, T. R. (2009) · Molecular Biology of the Cell · doi:10.1091/mbc.e08-10-1036 · Cited by 47 · see citing works

Engineering Pseudomonas putida for efficient aromatic conversion to bioproduct using high throughput screening in a bioreactor

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Heavy metal tolerance in marine strains of Yarrowia lipolytica

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Temperature preference can bias parental genome retention during hybrid evolution

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Global analysis of the yeast knockout phenome

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Correlation of Flavor Profile to Sensory Analysis of Bread Produced with Different Saccharomyces cerevisiae Originating from the Baking and Beverage Industry

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Differential Contribution of the Parental Genomes to a S. cerevisiae × S. uvarum Hybrid, Inferred by Phenomic, Genomic, and Transcriptomic Analyses, at Different Industrial Stress Conditions

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Genes Required for Growth at High Hydrostatic Pressure in Escherichia coli K-12 Identified by Genome-Wide Screening

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Molecular Responses to High Hydrostatic Pressure in Eukaryotes: Genetic Insights from Studies on Saccharomyces cerevisiae

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Characterization of the S. cerevisiae inp51 mutant links phosphatidylinositol 4,5-bisphosphate levels with lipid content, membrane fluidity and cold growth

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Identification of aluminium transport-related genes via genome-wide phenotypic screening of Saccharomyces cerevisiae

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Biochemical and cellular functions of P4 ATPases

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Isolation and Characterization of Barosensitive Mutants of Saccharomyces cerevisiae Obtained by UV Mutagenesis

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Effects of High Hydrostatic Pressure on Microbial Cell Membranes: Structural and Functional Perspectives

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Sng1 associates with Nce102 to regulate the yeast Pkh–Ypk signalling module in response to sphingolipid status

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Biomolecules under Pressure: Phase Diagrams, Volume Changes, and High Pressure Spectroscopic Techniques

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Genome-wide identification of genes involved in growth and fermentation activity at low temperature in Saccharomyces cerevisiae

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Cold‐sensitive phenotypes of a yeast null mutant of ARV1 support its role as a GPI flippase

Okai, H., Ikema, R., Nakamura, H., Kato, M., Araki, M., Mizuno, A., Ikeda, A., Renbaum, P., Segel, R., & Funato, K. (2020) · FEBS Letters · doi:10.1002/1873-3468.13843 · Cited by 18 · see citing works

Use of a wine yeast deletion collection reveals genes that influence fermentation performance under low-nitrogen conditions

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A novel ER membrane protein Ehg1/May24 plays a critical role in maintaining multiple nutrient permeases in yeast under high-pressure perturbation

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Multicopy Suppression Screening of Saccharomyces cerevisiae Identifies the Ubiquitination Machinery as a Main Target for Improving Growth at Low Temperatures

Hernandez-Lopez, M., García-Marqués, S., Rández‐Gil, F., & Prieto, J. A. (2011) · Applied and Environmental Microbiology · doi:10.1128/aem.00404-11 · Cited by 16 · see citing works

SOD1 mutations cause hypersensitivity to high-pressure-induced oxidative stress in Saccharomyces cerevisiae

Funada, C., Tanino, N., Fukaya, M., Mikajiri, Y., Nishiguchi, M., Otake, M., Nakasuji, H., Kawahito, R., & Abe, F. (2021) · Biochimica et Biophysica Acta (BBA) - General Subjects · doi:10.1016/j.bbagen.2021.130049 · Cited by 14 · see citing works

Overexpression of Sna3 stabilizes tryptophan permease Tat2, potentially competing for the WW domain of Rsp5 ubiquitin ligase with its binding protein Bul1

Hiraki, T., & Abe, F. (2009) · FEBS Letters · doi:10.1016/j.febslet.2009.11.076 · Cited by 15 · see citing works

Activation of CWI pathway through high hydrostatic pressure, enhancing glycerol efflux via the aquaglyceroporin Fps1 in Saccharomyces cerevisiae

Mochizuki, T., Tanigawa, T., Shindo, S., Suematsu, M., Oguchi, Y., Mioka, T., Kato, Y., Fujiyama, M., Hatano, E., Yamaguchi, M., et al. (2023) · Molecular Biology of the Cell · doi:10.1091/mbc.e23-03-0086 · Cited by 14 · see citing works

Síntesis y regulación de los compuestos del aroma y sabor derivados de la levadura en la cerveza: alcoholes superiores

Loviso, C. L., & Libkind, D. (2019) · Revista Argentina de Microbiología · doi:10.1016/j.ram.2018.08.006 · Cited by 14 · see citing works

Disulfide stress-induced aluminium toxicity: molecular insights through genome-wide screening of Saccharomyces cerevisiae

Tun, N. M., O'Doherty, P. J., Perrone, G. G., Bailey, T. D., Kersaitis, C., & Wu, M. J. (2013) · Metallomics · doi:10.1039/c3mt00083d · Cited by 12 · see citing works

Amino acid homeostatic control by TORC1 in Saccharomyces cerevisiae under high hydrostatic pressure

Uemura, S., Mochizuki, T., Amemiya, K., Kurosaka, G., Yazawa, M., Nakamoto, K., Ishikawa, Y., Izawa, S., & Abe, F. (2020) · Journal of Cell Science · doi:10.1242/jcs.245555 · Cited by 12 · see citing works

Substrate-induced differential degradation and partitioning of the two tryptophan permeases Tat1 and Tat2 into eisosomes in Saccharomyces cerevisiae

Ishii, R., Fukui, A., Sakihama, Y., Kitsukawa, S., Futami, A., Mochizuki, T., Nagano, M., Toshima, J., & Abe, F. (2022) · Biochimica et Biophysica Acta (BBA) - Biomembranes · doi:10.1016/j.bbamem.2021.183858 · Cited by 11 · see citing works

PRESSURE-REGULATED FERMENTATION: A REVOLUTIONARY APPROACH THAT UTILIZES HYDROSTATIC PRESSURE

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Cold-Adapted Yeasts in Deep-Sea Environments

Nagano, Y., Nagahama, T., & Abe, F. (2013) · Springer eBooks · doi:10.1007/978-3-642-39681-6_7 · Cited by 11 · see citing works

Importance of cell damage causing growth delay for high pressure inactivation ofSaccharomyces cerevisiae

Nanba, M., Nomura, K., Nasuhara, Y., Hayashi, M., Kido, M., Hayashi, M., Iguchi, A., Shigematsu, T., Hirayama, M., Ueno, S., et al. (2013) · High Pressure Research · doi:10.1080/08957959.2013.781596 · Cited by 10 · see citing works

Food Spoilage by Cold-Adapted Yeasts

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Thermosensitivity of a barosensitiveSaccharomyces cerevisiaemutant obtained by UV mutagenesis

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Comparative analysis on inactivation kinetics of between piezotolerant and piezosensitive mutant strains of Saccharomyces cerevisiae under combinations of high hydrostatic pressure and temperature

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High-throughput method for a kinetics analysis of the high-pressure inactivation of microorganisms using microplates

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A Chemical Genetic Screen for Modulators of Exocytic Transport Identifies Inhibitors of a Transport Mechanism Linked to GTR2 Function

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Differentially expressed genes under simulated deep-sea conditions in the psychrotolerant yeast Cryptococcus sp. NIOCC#PY13

Singh, P., Raghukumar, C., Verma, A. K., & Meena, R. M. (2012) · Extremophiles · doi:10.1007/s00792-012-0474-8 · Cited by 9 · see citing works

The YPR153W gene is essential for the pressure tolerance of tryptophan permease Tat2 in the yeast Saccharomyces cerevisiae

Kurosaka, G., & Abe, F. (2017) · High Pressure Research · doi:10.1080/08957959.2017.1413367 · Cited by 8 · see citing works

Response Mechanisms to Chemical and Physical Stresses in Yeast and Filamentous Fungi

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Adaptive response to wine selective pressures shapes the genome of a Saccharomyces interspecies hybrid

Lairón‐Peris, M., Castiglioni, G. L., Routledge, S. J., Alonso‐del‐Real, J., Linney, J. A., Pitt, A. R., Melcr, J., Goddard, A. D., Barrio, E., & Querol, A. (2021) · Microbial Genomics · doi:10.1099/mgen.0.000628 · Cited by 7 · see citing works

Database for High Throughput Screening Hits (dHITS): a simple tool to retrieve gene specific phenotypes from systematic screens done in yeast

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Applicability of Monod Equation to Growth Curves of Various Microorganisms

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Physiological and Transcriptional Responses of Anaerobic Chemostat Cultures of Saccharomyces cerevisiae Subjected to Diurnal Temperature Cycles

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Clarification of the recovery mechanism ofEscherichia coliafter hydrostatic pressure treatment

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High-throughput screening of food additives with synergistic effects on high hydrostatic pressure inactivation of budding yeast

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Genomic and Metabolomic Analyses of a Piezosensitive Mutant of Saccharomyces cerevisiae and Application for Generation of Piezosensitive Niigata-Sake Yeast Strains

Shigematsu, T., Kaneko, Y., Ikezaki, M., Kataoka, C., Nomura, K., Nakano, A., Aii, J., Aoki, T., Kuribayashi, T., Kaneoke, M., et al. (2021) · Foods · doi:10.3390/foods10102247 · Cited by 4 · see citing works

Molecular Evolution of Extremophiles

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TMEM170 proteins are lipid scramblases associated with bridge-type lipid transporters BLTP1/Csf1

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Lipid scrambling: New players, new questions, new opportunities

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Mtc6/Ehg2 is a novel endoplasmic reticulum-resident glycoprotein essential for high-pressure tolerance

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Ehg1/May24 stabilizes yeast amino acid permease by facilitating its localization to lipid rafts under high hydrostatic pressure

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Effects of High Hydrostatic Pressure on Microbial Physiology

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Analyses on Piezosensitive Mechanisms of Saccharomyces cerevisiae toward Development of Pressure-Regulated Fermentation Technique

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Stress Responses of the Yeast Saccharomyces cerevisiae Under High Hydrostatic Pressure

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Role of a novel endoplasmic reticulum–resident glycoprotein Mtc6/Ehg2 in high-pressure growth: stability of tryptophan permease Tat2 in Saccharomyces cerevisiae

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A DUF3844 domain-containing protein is required for vacuolar protein sorting in Schizosaccharomyces pombe

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High Pressures and Eukaryotes

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Genomewide Profiling of Rapamycin Sensitivity in Saccharomyces cerevisiae on Synthetic Medium

Chang, Y., Shin, C.-S., Han, D.-H., Kim, J.-Y., Kim, K.-I., Kwon, Y., & Huh, W. (2010) · Genomics & Informatics · doi:10.5808/gi.2010.8.4.177 · Cited by 1 · see citing works

A genome-wide RNAi screen for genes important for proliferation of cultured Drosophila cells at low temperature identifies the Ball/VRK protein kinase

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The Effects of High Hydrostatic Pressure on the Complex Intermolecular Networks in a Living Cell

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The CWI pathway is activated through high hydrostatic pressure, enhancing glycerol efflux via the aquaglyceroporin Fps1 in Saccharomyces cerevisiaePreprint

Mochizuki, T., Tanigawa, T., Shindo, S., Suematsu, M., Oguchi, Y., Mioka, T., Kato, Y., Fujiyama, M., Hatano, E., Yamaguchi, M., et al. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.11.15.516693 · Cited by 1 · see citing works

Molecular Genetic Research Department of Chemistry and Biological Science College of Science and Engineering Aoyama Gakuin University

Fumiyoshi, A. B. E. (2011) · The Review of High Pressure Science and Technology · doi:10.4131/jshpreview.21.310

Isolation Methods for High-Pressure Growth Mutant in Yeast

Abe, F. (2010) · Springer eBooks · doi:10.1007/978-4-431-53898-1_35

Regulation of transcriptional activation in response to heat stress and osmostress

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Determination of the genetic basis for successful fermentation in high sugar media.

Nguyen, T. D. (2014) · Adelaide Research & Scholarship (AR&S) (University of Adelaide)

Pressure tolerance of brine shrimp (Artemia)

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Current awareness on yeast

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A novel plasmid‐based experimental system in Saccharomyces cerevisiae that enables the introduction of 10 different plasmids into cells

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Csf1, a tunnel-like lipid-transfer protein, mediates lipid remodeling and underpins eukaryotic membrane resilience to high hydrostatic pressure and coldPreprint

Abe, F., Mioka, T., Suzuki, Y., Ogasawara, A., Mochizuki, D., Imura, S., Kato, Y., & Mochizuki, T. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.11.20.689427

High-Pressure Survival Strategy of Saccharomyces cerevisiae Involving the Endoplasmic Reticulum-Localized Proteins Ehg1 and Ehg2

Uemura, S., & Abe, F. (2026) · The Review of High Pressure Science and Technology · doi:10.4131/jshpreview.36.4

Csf1 facilitates adaptive membrane lipid remodeling linked to ER–plasma membrane contact sites

Abe, F., Mioka, T., Suzuki, Y., Ogasawara, A., Mochizuki, D., Imura, S., Kato, Y., Toda, A., Nikaido, S., & Mochizuki, T. (2026) · Molecular Biology of the Cell · doi:10.1091/mbc.e26-01-0059

The Effects of Environmental Conditions on Biological Systems. III. Life under the Influence of the Solar Activity, Electric and Geomagnetic Fields, and Atmospheric Pressure

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Yeast Chemical Genetics For Identifying Regulators of Late Secretory Traffic Pathways

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Single stranded DNA re-synthesis at uncapped telomeres requires replication polymerases

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The N- and C-terminal mutations in tryptophan permease Tat2 confer cell growth in Saccharomyces cerevisiae under high-pressure and low-temperature conditions

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Genome-wide expression analysis of yeast response during exposure to 4°C

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Large-Scale Transposon Mutagenesis of Photobacterium profundum SS9 Reveals New Genetic Loci Important for Growth at Low Temperature and High Pressure

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Induction of DAN/TIR yeast cell wall mannoprotein genes in response to high hydrostatic pressure and low temperature

Abe, F. (2007) · FEBS Letters · doi:10.1016/j.febslet.2007.09.039 · Cited by 48 · see citing works

Identification of Stress-Related Genes and a Comparative Analysis of the Amino Acid Compositions of Translated Coding Sequences Based on Draft Genome Sequences of Antarctic Yeasts

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