Impacts of salinity stress on crop plants: improving salt tolerance through genetic and molecular dissection
Open accessAbstract
Improper use of water resources in irrigation that contain a significant amount of salts, faulty agronomic practices such as improper fertilization, climate change etc. are gradually increasing soil salinity of arable lands across the globe. It is one of the major abiotic factors that inhibits overall plant growth through ionic imbalance, osmotic stress, oxidative stress, and reduced nutrient uptake. Plants have evolved with several adaptation strategies at morphological and molecular levels to withstand salinity stress. Among various approaches, harnessing the crop genetic variability across different genepools and developing salinity tolerant crop plants offer the most sustainable way of salt stress mitigation. Some important major genetic determinants controlling salinity tolerance have been uncovered using classical genetic approaches. However, its complex inheritance pattern makes breeding for salinity tolerance challenging. Subsequently, advances in sequence based breeding approaches and functional genomics have greatly assisted in underpinning novel genetic variants controlling salinity tolerance in plants at the whole genome level. This current review aims to shed light on physiological, biochemical, and molecular responses under salt stress, defense mechanisms of plants, underlying genetics of salt tolerance through bi-parental QTL mapping and Genome Wide Association Studies, and implication of Genomic Selection to breed salt tolerant lines.
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High salt levels disrupt the ionic balance within plant tissues, particularly by competing with essential ions such as potassium (K+), which are necessary for the optimal functioning of many enzymes.
“High salt levels disrupt the ionic balance within plant tissues, particularly by competing with essential ions such as potassium (K⁺), which are necessary for the optimal functioning of many enzymes53,60.”
From Cold plasma technology as a pre-treatment for seed priming enhances germination and reduces salinity stress in Prosopis Koelziana (2025) · cites this paper as [60]
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Santoyo, G., Orozco-Mosqueda, M. D. C., Afridi, M. S., Mitra, D., Valencia‐Cantero, E., & Macías‐Rodríguez, L. (2024) · Frontiers in Microbiology · doi:10.3389/fmicb.2024.1423980 · Cited by 85 · see citing works
Molecular Insights Into Salt Stress Adaptation in Plants
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Integrative approaches to enhance reproductive resilience of crops for climate-proof agriculture
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Salt stress in wheat: A physiological and genetic perspective
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Arabinosylation of cell wall extensin is required for the directional response to salinity in roots
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Abiotic Stress in Cotton: Insights into Plant Responses and Biotechnological Solutions
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Hormonal signaling at seed germination and seedling stage of plants under salinity stress
Ghosh, T., Atta, K., Mondal, S., Bandyopadhyay, S., Singh, A. P., Jha, U. C., Kumar, R., & Gujjar, R. S. (2025) · Plant Growth Regulation · doi:10.1007/s10725-025-01305-7 · Cited by 42 · see citing works
Self-citationEffects of Salinity on Seed Germination: Mechanisms, Impacts, and Mitigation Strategies
Manono, B. O. (2025) · Seeds · doi:10.3390/seeds5010001 · Cited by 40 · see citing works
Impact of cobalt and proline foliar application for alleviation of salinity stress in radish
Inayat, H., Mehmood, H., Danish, S., Alharbi, S. A., Ansari, M. J., & Datta, R. (2024) · BMC Plant Biology · doi:10.1186/s12870-024-04998-6 · Cited by 36 · see citing works
Alvan, H. A., Jabbarzadeh, Z., Fard, J. R., & Noruzi, P. (2025) · Scientific Reports · doi:10.1038/s41598-025-89463-6 · Cited by 33 · see citing works
Lin, S., Wang, Q., Wei, K., Sun, Y., Shao, F., Lei, Q., & Deng, M. (2024) · Journal of Cleaner Production · doi:10.1016/j.jclepro.2024.141935 · Cited by 31 · see citing works
A stable 15-member bacterial SynCom promotes Brachypodium growth under drought stress
Yadav, A., Chen, M., Acharya, S. M., Kim, G., Yang, Y., Zhao, T. Z., Tsang, E., & Chakraborty, R. (2025) · Frontiers in Microbiology · doi:10.3389/fmicb.2025.1649750 · Cited by 30 · see citing works
Plant Biostimulants Enhance Tomato Resilience to Salinity Stress: Insights from Two Greek Landraces
Ntanasi, T., Karavidas, I., Spyrou, G. P., Giannothanasis, E., Aliferis, K. A., Saitanis, C. J., Fotopoulos, V., Sabatino, L., Savvas, D., & Ntatsi, G. (2024) · Plants · doi:10.3390/plants13101404 · Cited by 29 · see citing works
Polyamines: New Plant Growth Regulators Promoting Salt Stress Tolerance in Plants
Amiri, H., بناکار, م. ح., & Gavyar, P. H. H. (2024) · Journal of Plant Growth Regulation · doi:10.1007/s00344-024-11447-z · Cited by 29 · see citing works
Jiang, H., Okoye, C. O., Ezenwanne, B. C., Wu, Y., & Jiang, J. (2025) · Microbiological Research · doi:10.1016/j.micres.2025.128227 · Cited by 29 · see citing works
Zaki, R. M., Afify, A., Ashour, E., & El‐Sawah, A. M. (2025) · Microorganisms · doi:10.3390/microorganisms13061345 · Cited by 29 · see citing works
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Khalifa, A. M., Safhi, F. A., & Elsherif, D. E. (2024) · BMC Plant Biology · doi:10.1186/s12870-024-05270-7 · Cited by 27 · see citing works
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Self-citationIntegrative dynamics of cell wall architecture and plant growth under salt stress
Tariq, F., Ma, C., & Zhao, S. (2025) · Frontiers in Plant Science · doi:10.3389/fpls.2025.1644412 · Cited by 27 · see citing works
Nurrahma, A. H. I., Harsonowati, W., Putri, H. H., & Iqbal, R. (2024) · Journal of soil science and plant nutrition · doi:10.1007/s42729-024-01980-x · Cited by 26 · see citing works
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Plant genomic and microbial interplay in the rhizosphere under salt stress: a review
Ren, Y., Yan, H., & Ma, A. (2026) · Frontiers in Plant Science · doi:10.3389/fpls.2025.1667328 · Cited by 26 · see citing works
Nitric oxide as an integral element in priming-induced tolerance and plant stress memory
Fejes, G., Bodor, T., Szőllősi, R., Kondak, S., Kutasi, K., Fotopoulos, V., & Kolbert, Z. (2025) · Journal of Experimental Botany · doi:10.1093/jxb/eraf033 · Cited by 25 · see citing works
Self-Defense Mechanism in Rice to Salinity: Proline
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Rong, Y., Wang, W., Wu, P., Wang, P., Zhang, C., Wang, C., & Huo, Z. (2024) · Water Resources Research · doi:10.1029/2023wr036809 · Cited by 22 · see citing works
ZmASR6 positively regulates salt stress tolerance in maize
Li, A., Yang, Y., Guo, Y., Li, Q., Zhou, A., Wang, J., Lu, R., Shelden, M. C., Wu, C., & Wu, J. (2025) · New Crops · doi:10.1016/j.ncrops.2025.100067 · Cited by 22 · see citing works
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Learning from Salicornia: Physiological, Biochemical, and Molecular Mechanisms of Salinity Tolerance
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Hidri, R., Mahmoud, O. M., Debez, A., Zorrig, W., Abdelly, C., Zamarreño, A. M., García‐Mina, J. M., Azcón, R., & Aroca, R. (2024) · Journal of Plant Growth Regulation · doi:10.1007/s00344-024-11438-0 · Cited by 20 · see citing works
Synergistic effects of phytohormones and membrane transporters in plant salt stress mitigation
Nidhi, N., Iqbal, N., & Khan, N. A. (2025) · Plant Physiology and Biochemistry · doi:10.1016/j.plaphy.2025.109685 · Cited by 20 · see citing works
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Soil holobiont interplay and its role in protecting plants against salinity stress
Sliti, A., Singh, V., Pande, A., & Shin, J.-H. (2024) · Pedosphere · doi:10.1016/j.pedsph.2024.09.002 · Cited by 18 · see citing works
Ovule and seed development of crop plants in response to climate change
Erfatpour, M., MacLean, D. E., Lahlali, R., & Jiang, Y. (2024) · Frontiers in Sustainable Food Systems · doi:10.3389/fsufs.2024.1495610 · Cited by 18 · see citing works
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Improving crop salt tolerance through soil legacy effects
Ma, Y., Zheng, C., Bo, Y., Song, C., & Zhu, F. (2024) · Frontiers in Plant Science · doi:10.3389/fpls.2024.1396754 · Cited by 17 · see citing works
Dynamic molecular regulation of salt stress responses in maize (Zea mays L.) seedlings
Maimaiti, A., Gu, W., Yu, D., Guan, Y., Qu, J., Qin, T., Wang, H., Ren, J., Zheng, H., & Wu, P. (2025) · Frontiers in Plant Science · doi:10.3389/fpls.2025.1535943 · Cited by 17 · see citing works
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Compost application enhances soil quality, growth, and yield of durum wheat under saline conditions
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Understanding abiotic stress tolerance mechanisms in non-food grass species through omics approaches
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Microbial Resilience in Arid Soils: Ecological Responses to Drought and Salinity Stress
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Comprehensive In Silico Analysis of the NHX (Na+/H+ Antiporter) Gene in Rice (Oryza sativa L.)
Bui, H. H. T., Nguyen, D. H., Dinh, L. T. T., Trinh, H. T. T., Vu, T. K., & Bui, V. N. (2025) · International Journal of Plant Biology · doi:10.3390/ijpb16010006 · Cited by 13 · see citing works
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Performance-based criteria for safe and circular digestate use in agriculture
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ONAC005 enhances salt stress tolerance by promoting suberin deposition in root endodermis
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Design considerations of highly sensitive dual resonance metasurface grating biosensor
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Understanding salinity tolerance mechanisms in finger millet through metabolomics
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Salinity-tolerant rice: A sustainable solution for food security and greenhouse gas mitigation
Mahender, A., Catolos, M., Ramos, J. M., Morgana Callai, C. R. U. Z., Zhang, X., Radanielson, A. M., Bhosale, S., Reyes, B. G. D. L., & Hussain, W. (2025) · Current Plant Biology · doi:10.1016/j.cpb.2025.100518 · Cited by 9 · see citing works
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Role of jasmonic acid and salicylic acid in salinity stress mitigation in plants
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The sorghum SbMPK3-SbNAC074 module involved in salt tolerance
Wang, H., Wei, L., Feng, Y., Zeng, T., Gu, L., Zhu, B., & Du, X. (2025) · Plant Physiology and Biochemistry · doi:10.1016/j.plaphy.2025.109981 · Cited by 8 · see citing works
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Can autophagy enhance crop resilience to environmental stress?
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Self-citation
- Authors
- Atta, K., Mondal, S., Gorai, S., Singh, A. P., Kumari, A., Ghosh, T., Roy, A., Hembram, S., Gaikwad, D. J., Mondal, S., Bhattacharya, S., Jha, U. C., & Jespersen, D.
- Affiliations
- Bidhan Chandra Krishi Viswavidyalaya (IN)
- Indian Council of Agricultural Research (IN)
- Government of West Bengal (IN)
- Centurion University of Technology and Management (IN)
- Indian Institute of Pulses Research (IN)
- University of Georgia (US)
- Corresponding author
- Gorai, Shouvik
- Jespersen, David
- ORCID
- Venue
- Frontiers in Plant Science
- Publisher
- Frontiers Media SA
- Published
- 2023-09-15
- Volume
- 14
- Pages
- 1241736-1241736
- ISSN
- 1664-462X (ISSN-L)
- PMC
- PMC10540871
- OpenAlex
- W4386836861
- Cited by
- 523
- References
- 257
- Citations by year
- 2026: 232 · 2025: 212 · 2024: 79
- FWCI
- 12.53
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Frontiers in Plant Science (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Topics
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Stress Responses and Tolerance
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Mapping and Diversity in Plants and Animals
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Genetics and Plant Breeding
- Keywords
- salt stress, salt tolerance, cultivated plants, soil salinity, osmotic stress, oxidative stress, ionic imbalance, nutrient uptake, plant adaptation strategies, QTL mapping, genome-wide association study, genomic selection, salt tolerance breeding, functional genomics
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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