Cooper, Alan

Massive migration from the steppe was a source for Indo-European languages in Europe

Haak, W., Lazaridis, I., Patterson, N., Rohland, N., Mallick, S., Llamas, B., Brandt, G., Nordenfelt, S., Harney, E., Stewardson, K., et al. (2015) · Nature

Forensic and Genetic ResearchGenetic diversity and population structure

Cited by 1,940

Genome-wide patterns of selection in 230 ancient Eurasians

Mathieson, I., Lazaridis, I., Rohland, N., Mallick, S., Patterson, N., Roodenberg, S. A., Harney, E., Stewardson, K., Fernandes, D., Novak, M., et al. (2015) · Nature

Forensic and Genetic ResearchGenetic diversity and population structure

Cited by 1,515

Ancient human genomes suggest three ancestral populations for present-day Europeans

Lazaridis, I., Patterson, N., Mittnik, A., Renaud, G., Mallick, S., Kirsanow, K., Sudmant, P. H., Schraiber, J. G., Castellano, S., Lipson, M., et al. (2014) · Nature

Forensic and Genetic ResearchGenetic diversity and population structure

Cited by 1,357

Contamination in Low Microbial Biomass Microbiome Studies: Issues and Recommendations

Eisenhofer, R., Minich, J. J., Marotz, C., Cooper, A., Knight, R., & Weyrich, L. S. (2019) · Trends in Microbiology

Genomics and Phylogenetic StudiesGut microbiota and health

Cited by 1,146

Review Paper. Ancient DNA

Willerslev, E., & Cooper, A. (2005) · Proceedings of the Royal Society B: Biological Sciences

Forensic and Genetic ResearchGenetic diversity and population structure

Cited by 712

Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions

Adler, C. J., Dobney, K., Weyrich, L. S., Kaidonis, J., Walker, A. W., Haak, W., Bradshaw, C. J. A., Townsend, G., Sołtysiak, A., Alt, K. W., et al. (2013) · Nature Genetics

Oral microbiology and periodontitis researchPaleopathology and ancient diseases

Cited by 621

Mass survival of birds across the Cretaceous–Tertiary boundary: Molecular evidence.

Cooper, A., & Penny, D. (1997) · Science

Evolution and Paleontology StudiesPaleontology and Evolutionary Biology

Cited by 472

Parallel palaeogenomic transects reveal complex genetic history of early European farmers

Lipson, M., Szécsényi-Nagy, A., Mallick, S., Pósa, A., Stégmár, B., Keerl, V., Rohland, N., Stewardson, K., Ferry, M., Michel, M., et al. (2017) · Nature

Forensic and Genetic ResearchGenetic diversity and population structure

Cited by 389

Environmental metabarcodes for insects: in silicoPCR reveals potential for taxonomic bias

Clarke, L. J., Soubrier, J., Weyrich, L. S., & Cooper, A. (2014) · Molecular Ecology Resources

Environmental DNA in Biodiversity StudiesInvertebrate Taxonomy and Ecology

Cited by 351

Ancient DNA Reveals Key Stages in the Formation of Central European Mitochondrial Genetic Diversity

Brandt, G., Haak, W., Adler, C. J., Roth, C., Szécsényi-Nagy, A., Karimnia, S., Möller-Rieker, S., Meller, H., Ganslmeier, R., Friederich, S., et al. (2013) · Science

Forensic and Genetic ResearchGenetic diversity and population structure

Cited by 322

Ancient DNA reveals elephant birds and kiwi are sister taxa and clarifies ratite bird evolution

Mitchell, K. J., Llamas, B., Soubrier, J., Rawlence, N. J., Worthy, T. H., Wood, J., Lee, M. S. Y., & Cooper, A. (2014) · Science

Evolution and Paleontology StudiesPaleontology and Evolutionary Biology

Cited by 285

When did Homo sapiens first reach Southeast Asia and Sahul?

O’Connell, J. F., Allen, J., Williams, M. A. J., Williams, A. N., Turney, C. S. M., Spooner, N. A., Kamminga, J., Brown, G., & Cooper, A. (2018) · Proceedings of the National Academy of Sciences

Pleistocene-Era Hominins and ArchaeologyPacific and Southeast Asian Studies

Cited by 236

Long-term persistence of bacterial DNA

Willerslev, E., Hansen, A. J., Rønn, R., Brand, T. B., Barnes, I., Wiuf, C., Gilichinsky, D., Mitchell, D., & Cooper, A. (2004) · Current Biology

Polar Research and EcologyMicrobial Community Ecology and Physiology

Cited by 232

A molecular analysis of dietary diversity for three archaic Native Americans

Poinar, H. N., Kuch, M., Sobolik, K. D., Barnes, I., Stankiewicz, A. B., Kuder, T., Spaulding, W. G., Bryant, V. M., Cooper, A., & Pääbo, S. (2001) · Proceedings of the National Academy of Sciences

Forensic and Genetic ResearchArchaeology and ancient environmental studies

Cited by 160

Testing the Cambrian explosion hypothesis by using a molecular dating technique

Bromham, L., Rambaut, A., Fortey, R., Cooper, A., & Penny, D. (1998) · Proceedings of the National Academy of Sciences

Evolution and Paleontology StudiesMarine Invertebrate Physiology and Ecology

Cited by 148

Ancient DNA analysis of dental calculus

Weyrich, L. S., Dobney, K., & Cooper, A. (2015) · Journal of Human Evolution

Paleopathology and ancient diseasesForensic and Genetic Research

Cited by 147

Using hominin introgression to trace modern human dispersals

Teixeira, J. C., & Cooper, A. (2019) · Proceedings of the National Academy of Sciences

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 136

Palaeogeography and voyage modeling indicates early human colonization of Australia was likely from Timor-Roti

Bird, M. I., Beaman, R. J., Condie, S. A., Cooper, A., Ulm, S., & Veth, P. (2018) · Quaternary Science Reviews

Pleistocene-Era Hominins and ArchaeologyPacific and Southeast Asian Studies

Cited by 122

Indo-European and Asian origins for Chilean and Pacific chickens revealed by mtDNA

Gongora, J., Rawlence, N. J., Mobegi, V. A., Jianlin, H., Alcalde, J. A., Matus, J. T., Hanotte, O., Moran, C., Austin, J. J., Ulm, S., et al. (2008) · Proceedings of the National Academy of Sciences

Forensic and Genetic ResearchLivestock and Poultry Management

Cited by 117

Ancient and modern genomes unravel the evolutionary history of the rhinoceros family

Liu, S., Westbury, M. V., Dussex, N., Mitchell, K. J., Sinding, M.-H. S., Heintzman, P. D., Duchêne, D. A., Kapp, J. D., von Seth, J., Heiniger, H., et al. (2021) · Cell

Genetic diversity and population structureEvolution and Paleontology Studies

Cited by 101

Experimental conditions improving in‐solution target enrichment for ancient DNA

Cruz‐Dávalos, D. I., Llamas, B., Gaunitz, C., Fages, A., Gamba, C., Soubrier, J., Librado, P., Seguin‐Orlando, A., Pruvost, M., Alfarhan, A. H., et al. (2017) · Molecular Ecology Resources

Forensic and Genetic ResearchGenomics and Phylogenetic Studies

Cited by 90

Systematic benchmark of ancient DNA read mapping

Oliva, A., Tobler, R., Cooper, A., Llamas, B., & Souilmi, Y. (2021) · Briefings in Bioinformatics

Genomics and Phylogenetic StudiesForensic and Genetic Research

Cited by 63

Widespread Denisovan ancestry in Island Southeast Asia but no evidence of substantial super-archaic hominin admixture

Teixeira, J. C., Jacobs, G. S., Stringer, C., Tuke, J., Hudjashov, G., Purnomo, G. A., Sudoyo, H., Cox, M. P., Tobler, R., Turney, C. S. M., et al. (2021) · Nature Ecology & Evolution

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 51

Long‐term survival of ancient DNA in Egypt: Response to Zink and Nerlich (2003)

Gilbert, M. T. P., Barnes, I., Collins, M. J., Smith, C., Eklund, J., Goudsmit, J., Poinar, H., & Cooper, A. (2005) · American Journal of Physical Anthropology

Forensic and Genetic ResearchPaleopathology and ancient diseases

Cited by 45