Quake, Stephen R.

Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing

Treutlein, B., Gokce, O., Quake, S. R., & Südhof, T. C. (2014) · Proceedings of the National Academy of Sciences

RNA Research and SplicingNeuroscience and Neuropharmacology Research

Cited by 348

Lineage Structure of the Human Antibody Repertoire in Response to Influenza Vaccination

Jiang, N., He, J., Weinstein, J. A., Penland, L., Sasaki, S., He, X.-S., Dekker, C. L., Zheng, N.-Y., Huang, M., Sullivan, M., et al. (2013) · Science Translational Medicine

T-cell and B-cell ImmunologyMonoclonal and Polyclonal Antibodies Research

Cited by 335

Single-cell transcriptomes and whole-brain projections of serotonin neurons in the mouse dorsal and median raphe nuclei

Ren, J., Isakova, A., Friedmann, D., Zeng, J., Grutzner, S. M., Pun, A., Zhao, G. Q., Kolluru, S. S., Wang, R., Lin, R., et al. (2019) · eLife

Single-cell and spatial transcriptomicsNeuroscience and Neuropharmacology Research

Cited by 304

Identification of a cKit(+) colonic crypt base secretory cell that supports Lgr5(+) stem cells in mice

Rothenberg, M. E., Nusse, Y., Kalisky, T., Lee, J. J., Dalerba, P., Scheeren, F., Lobo, N., Kulkarni, S., Sim, S., Qian, D., et al. (2012) · Gastroenterology

Cancer Cells and MetastasisDigestive system and related health

Cited by 263

Brain Endothelial Cells Are Exquisite Sensors of Age-Related Circulatory Cues

Chen, M. B., Yang, A. C., Yousef, H., Lee, D., Chen, W., Schaum, N., Lehallier, B., Quake, S. R., & Wyss-Coray, T. (2020) · Cell Reports

Barrier Structure and Function StudiesGenetics, Aging, and Longevity in Model Organisms

Cited by 233

RNA-guided endonuclease provides a therapeutic strategy to cure latent herpesviridae infection

Wang, J., & Quake, S. R. (2014) · Proceedings of the National Academy of Sciences

CRISPR and Genetic EngineeringVirus-based gene therapy research

Cited by 220

Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators

Li, J., Han, S., Li, H., Udeshi, N. D., Svinkina, T., Mani, D. R., Xu, C., Guajardo, R., Xie, Q., Li, T., et al. (2020) · Cell

Neurobiology and Insect Physiology ResearchAxon Guidance and Neuronal Signaling

Cited by 204

Single-cell RNAseq reveals cell adhesion molecule profiles in electrophysiologically defined neurons

Földy, C., Darmanis, S., Aoto, J., Malenka, R. C., Quake, S. R., & Südhof, T. C. (2016) · Proceedings of the National Academy of Sciences

Neuroscience and Neuropharmacology ResearchSingle-cell and spatial transcriptomics

Cited by 179

Spatial transcriptomics reveal neuron–astrocyte synergy in long-term memory

Sun, W., Liu, Z., Jiang, X., Chen, M. B., Dong, H., Liu, J., Südhof, T. C., & Quake, S. R. (2024) · Nature

Memory and Neural MechanismsNeuroscience and Neuropharmacology Research

Cited by 165

Continuous and Discrete Neuron Types of the Adult Murine Striatum

Stanley, G., Gokce, O., Malenka, R. C., Südhof, T. C., & Quake, S. R. (2020) · Neuron

Single-cell and spatial transcriptomicsNeuroscience and Neuropharmacology Research

Cited by 158

Single-Cell DNA-Methylation Analysis Reveals Epigenetic Chimerism in Preimplantation Embryos

Lorthongpanich, C., Cheow, L. F., Balu, S., Quake, S. R., Knowles, B. B., Burkholder, W. F., Solter, D., & Messerschmidt, D. M. (2013) · Science

Epigenetics and DNA MethylationGenetic Syndromes and Imprinting

Cited by 154

Molecular hallmarks of heterochronic parabiosis at single-cell resolution

Pálovics, R., Keller, A., Schaum, N., Tan, W., Fehlmann, T., Borja, M., Kern, F., Bonanno, L., Calcuttawala, K., Webber, J., et al. (2022) · Nature

Genetics, Aging, and Longevity in Model OrganismsSingle-cell and spatial transcriptomics

Cited by 153

Sensitivity of Noninvasive Prenatal Detection of Fetal Aneuploidy from Maternal Plasma Using Shotgun Sequencing Is Limited Only by Counting Statistics

Fan, H. C., & Quake, S. R. (2010) · PLoS ONE

Prenatal Screening and DiagnosticsGenomics and Phylogenetic Studies

Cited by 141

A mouse tissue atlas of small noncoding RNA

Isakova, A., Fehlmann, T., Keller, A., & Quake, S. R. (2020) · Proceedings of the National Academy of Sciences

MicroRNA in disease regulationCancer-related molecular mechanisms research

Cited by 119

Persistent transcriptional programmes are associated with remote memory

Chen, M. B., Jiang, X., Quake, S. R., & Südhof, T. C. (2020) · Nature

Memory and Neural MechanismsNeuroscience and Neuropharmacology Research

Cited by 111

Biocompatibility and reduced drug absorption of sol-gel-treated poly(dimethyl siloxane) for microfluidic cell culture applications

Gomez-Sjoberg, R., Leyrat, A. A., Houseman, B. T., Shokat, K., & Quake, S. R. (2010) · Analytical Chemistry

Microfluidic and Capillary Electrophoresis Applications3D Printing in Biomedical Research

Cited by 104

The biological frontier of physics

Phillips, R., & Quake, S. R. (2006) · Physics Today

Interdisciplinary Research and CollaborationPhilosophy of Biology and Scientific Explanation

Cited by 102

Transcription factor Acj6 controls dendrite targeting via a combinatorial cell-surface code

Xie, Q., Li, J., Li, H., Udeshi, N. D., Svinkina, T., Orlin, D., Kohani, S., Guajardo, R., Mani, D. R., Xu, C., et al. (2022) · Neuron

Axon Guidance and Neuronal SignalingNeurobiology and Insect Physiology Research

Cited by 42

High fidelity hypothermic preservation of primary tissues in organ transplant preservative for single cell transcriptome analysis

Wang, W., Penland, L., Gokce, O., Croote, D., & Quake, S. R. (2018) · BMC Genomics

Single-cell and spatial transcriptomicsMolecular Biology Techniques and Applications

Cited by 23

Inhibiting USP16 rescues stem cell aging and memory in an Alzheimer’s model

Reinitz, F., Chen, E. Y., Nicolis di Robilant, B., Chuluun, B., Antony, J., Jones, R. C., Gubbi, N., Lee, K., Ho, W. H. D., Kolluru, S. S., et al. (2022) · eLife

Alzheimer's disease research and treatmentsNeurogenesis and neuroplasticity mechanisms

Cited by 18