From Designing the Molecules of Life to Designing Life: Future Applications Derived from Advances in DNA Technologies.
Abstract
Since the elucidation of its structure, DNA has been at the forefront of biological research. In the past half century, an explosion of DNA-based technology development has occurred with the most rapid advances being made for DNA sequencing. In parallel, dramatic improvements have also been made in the synthesis and editing of DNA from the oligonucleotide to the genome scale. In this Review, we will summarize four different subfields relating to DNA technologies following this trajectory of smaller to larger scale. We begin by talking about building materials out of DNA which in turn can act as delivery vehicles in vivo. We then discuss how altering microbial genomes can lead to novel methods of production for industrial biologics. Next, we talk about the future of writing whole genomes as a method of studying evolution. Lastly, we highlight the ways in which barcoding biological systems will allow for their three-dimensional analysis in a highly multiplexed fashion.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
There is a general trend that the cost and efforts required rises exponentially with the increased size of the genome to be synthesized.
“There is a general trend that the cost and efforts required rises exponentially with the increased size of the genome to be synthesized”
From Large-Scale de Novo Oligonucleotide Synthesis for Whole-Genome Synthesis and Data Storage: Challenges and Opportunities (2021) · cites this paper as Kohman et al., 2018
The time and labor-intensive DNA assembly and testing process consumes a major part of the costs of whole-genome synthesis.
“Meanwhile, the time and labor-intensive DNA assembly and testing process consumes a major part of the costs”
From Large-Scale de Novo Oligonucleotide Synthesis for Whole-Genome Synthesis and Data Storage: Challenges and Opportunities (2021) · cites this paper as Kohman et al., 2018
Cites
Folding DNA to create nanoscale shapes and patterns
Rothemund, P. W. K. (2006) · Nature · doi:10.1038/nature04586 · Cited by 7,320 · see citing works
Spatially resolved, highly multiplexed RNA profiling in single cells
Chen, K. H., Boettiger, A. N., Moffitt, J. R., Wang, S., & Zhuang, X. (2015) · Science · doi:10.1126/science.aaa6090 · Cited by 2,969 · see citing works
Creation of a Bacterial Cell Controlled by a Chemically Synthesized Genome
Gibson, D. G., Glass, J. I., Lartigue, C., Noskov, V. N., Chuang, R.-Y., Algire, M. A., Benders, G. A., Montague, M. G., Ma, L., Moodie, M. M., et al. (2010) · Science · doi:10.1126/science.1190719 · Cited by 2,638 · see citing works
Self-assembly of DNA into nanoscale three-dimensional shapes
Douglas, S. M., Dietz, H., Liedl, T., Högberg, B., Graf, F., & Shih, W. M. (2009) · Nature · doi:10.1038/nature08016 · Cited by 2,579 · see citing works
Nucleic acid junctions and lattices
Seeman, N. C. (1982) · Journal of Theoretical Biology · doi:10.1016/0022-5193(82)90002-9 · Cited by 2,505 · see citing works
Evolution by gene duplication: An update
Zhang, J. (2003) · Trends in Ecology & Evolution · doi:10.1016/s0169-5347(03)00033-8 · Cited by 2,201 · see citing works
A Logic-Gated Nanorobot for Targeted Transport of Molecular Payloads
Douglas, S. M., Bachelet, I., & Church, G. M. (2012) · Science · doi:10.1126/science.1214081 · Cited by 2,187 · see citing works
Self-citationTriggered amplification by hybridization chain reaction
Dirks, R. M., & Pierce, N. A. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0407024101 · Cited by 2,077 · see citing works
In Vivo Half-Life of a Protein Is a Function of Its Amino-Terminal Residue
Bachmair, A., Finley, D. J., & Varshavsky, A. J. (1986) · Science · doi:10.1126/science.3018930 · Cited by 1,976 · see citing works
Ultraconserved Elements in the Human Genome
Bejerano, G., Pheasant, M., Makunin, I., Stephen, S., Kent, W. J., Mattick, J. S., & Haussler, D. (2004) · Science · doi:10.1126/science.1098119 · Cited by 1,732 · see citing works
Self-assembly of a nanoscale DNA box with a controllable lid
Andersen, E. S., Dong, M., Nielsen, M. M., Jahn, K., Subramani, R., Mamdouh, W., Golas, M. M., Sander, B. O., Stark, H., Oliveira, C. L. P., et al. (2009) · Nature · doi:10.1038/nature07971 · Cited by 1,628 · see citing works
Chen, F., Tillberg, P. W., & Boyden, E. S. (2015) · Science · doi:10.1126/science.1260088 · Cited by 1,531 · see citing works
Programming cells by multiplex genome engineering and accelerated evolution
Wang, H. H., Isaacs, F. J., Carr, P. A., Sun, Z. Z., Xu, G., Forest, C. R., & Church, G. M. (2009) · Nature · doi:10.1038/nature08187 · Cited by 1,529 · see citing works
Self-citationExpanding the Genetic Code of Escherichia coli
Wang, L., Brock, A., Herberich, B., & Schultz, P. G. (2001) · Science · doi:10.1126/science.1060077 · Cited by 1,504 · see citing works
Design and synthesis of a minimal bacterial genome
Hutchison, C. A., Chuang, R.-Y., Noskov, V. N., Assad-Garcia, N., Deerinck, T. J., Ellisman, M. H., Gill, J., Kannan, K., Karas, B. J., Ma, L., et al. (2016) · Science · doi:10.1126/science.aad6253 · Cited by 1,500 · see citing works
Next-Generation Digital Information Storage in DNA
Church, G. M., Gao, Y., & Kosuri, S. (2012) · Science · doi:10.1126/science.1226355 · Cited by 1,441 · see citing works
Self-citationAccurate Multiplex Polony Sequencing of an Evolved Bacterial Genome
Shendure, J., Porreca, G. J., Reppas, N. B., Lin, X., McCutcheon, J. P., Rosenbaum, A. M., Wang, M. D., Zhang, K., Mitra, R. D., & Church, G. M. (2005) · Science · doi:10.1126/science.1117389 · Cited by 1,402 · see citing works
Self-citationFolding DNA into Twisted and Curved Nanoscale Shapes
Dietz, H., Douglas, S. M., & Shih, W. M. (2009) · Science · doi:10.1126/science.1174251 · Cited by 1,340 · see citing works
Three-Dimensional Structures Self-Assembled from DNA Bricks
Ke, Y., Ong, L. L., Shih, W. M., & Yin, P. (2012) · Science · doi:10.1126/science.1227268 · Cited by 1,249 · see citing works
Complete Chemical Synthesis, Assembly, and Cloning of a <i>Mycoplasma genitalium</i> Genome
Gibson, D. G., Benders, G. A., Andrews-Pfannkoch, C., Denisova, E. A., Baden-Tillson, H., Zaveri, J., Stockwell, T. B., Brownley, A., Thomas, D. W., Algire, M. A., et al. (2008) · Science · doi:10.1126/science.1151721 · Cited by 1,243 · see citing works
Rapid prototyping of 3D DNA-origami shapes with caDNAno
Douglas, S. M., Marblestone, A. H., Teerapittayanon, S., Vazquez, A., Church, G. M., & Shih, W. M. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp436 · Cited by 1,226 · see citing works
Self-citationTowards Practical, High-Capacity, Low-Maintenance Information Storage in Synthesized DNA
Goldman, N., Bertone, P., Chen, S., Dessimoz, C., LeProust, E. M., Sipos, B., & Birney, E. (2013) · Nature · doi:10.1038/nature11875 · Cited by 1,220 · see citing works
DNA Origami with Complex Curvatures in Three-Dimensional Space
Han, D., Pal, S., Nangreave, J., Deng, Z., Liu, Y., & Yan, H. (2011) · Science · doi:10.1126/science.1202998 · Cited by 1,216 · see citing works
Multiplexed 3D cellular super-resolution imaging with DNA-PAINT and Exchange-PAINT
Jungmann, R., Avendaño, M. S., Woehrstein, J. B., Dai, M., Shih, W. M., & Yin, P. (2014) · Nature Methods · doi:10.1038/nmeth.2835 · Cited by 1,137 · see citing works
DNA Origami: Scaffolds for Creating Higher Order Structures
Fan, H. B., Zhang, F., Liu, Y., & Yan, H. (2017) · Chemical Reviews · doi:10.1021/acs.chemrev.6b00825 · Cited by 1,090 · see citing works
Initial impact of the sequencing of the human genome
Lander, E. S. (2011) · Nature · doi:10.1038/nature09792 · Cited by 1,044 · see citing works
Modern methods for delivery of drugs across the blood–brain barrier
Chen, Y., & Liu, L. (2011) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2011.11.010 · Cited by 1,005 · see citing works
Seeman, N. C. (2010) · Annual Review of Biochemistry · doi:10.1146/annurev-biochem-060308-102244 · Cited by 992 · see citing works
Single-cell in situ RNA profiling by sequential hybridization
Lubeck, E., Coskun, A. F., Zhiyentayev, T., Ahmad, M., & Cai, L. (2014) · Nature Methods · doi:10.1038/nmeth.2892 · Cited by 985 · see citing works
Highly Multiplexed Subcellular RNA Sequencing in Situ
Lee, J. H., Daugharthy, E. R., Scheiman, J., Kalhor, R., Yang, J. L., Ferrante, T. C., Terry, R., Jeanty, S. S. F., Li, C., Amamoto, R., et al. (2014) · Science · doi:10.1126/science.1250212 · Cited by 973 · see citing works
Self-citationIn situ sequencing for RNA analysis in preserved tissue and cells
Ke, R., Mignardi, M., Pacureanu, A., Svedlund, J., Botling, J., Wählby, C., & Nilsson, M. (2013) · Nature Methods · doi:10.1038/nmeth.2563 · Cited by 934 · see citing works
A primer to scaffolded DNA origami
Castro, C. E., Kilchherr, F., Kim, D., Lin-Shiao, E., Wauer, T., Wortmann, P., Bathe, M., & Dietz, H. (2011) · Nature Methods · doi:10.1038/nmeth.1570 · Cited by 926 · see citing works
DNA Fountain enables a robust and efficient storage architecture
Erlich, Y., & Zielinski, D. (2017) · Science · doi:10.1126/science.aaj2038 · Cited by 898 · see citing works
Genomically Recoded Organisms Expand Biological Functions
Lajoie, M. J., Rovner, A. J., Goodman, D. B., Aerni, H. R., Haimovich, A. D., Kuznetsov, G., Mercer, J. A. M., Wang, H. H., Carr, P. A., Mosberg, J. A., et al. (2013) · Science · doi:10.1126/science.1241459 · Cited by 859 · see citing works
Self-citationRobust Chemical Preservation of Digital Information on DNA in Silica with Error-Correcting Codes
Grass, R. N., Heckel, R., Puddu, M., Paunescu, D., & Stark, W. J. (2015) · Angewandte Chemie International Edition · doi:10.1002/anie.201411378 · Cited by 754 · see citing works
DNA Origami as a Carrier for Circumvention of Drug Resistance
Jiang, Q., Song, C., Nangreave, J., Liu, X., Lin, L., Qiu, D., Wang, Z., Zou, G., Liang, X., Yan, H., et al. (2012) · Journal of the American Chemical Society · doi:10.1021/ja304263n · Cited by 738 · see citing works
Expanding and reprogramming the genetic code
Chin, J. W. (2017) · Nature · doi:10.1038/nature24031 · Cited by 730 · see citing works
Programmable in situ amplification for multiplexed imaging of mRNA expression
Choi, H. M. T., Chang, J. Y., Trinh, L. A., Padilla, J. E., Fraser, S. E., & Pierce, N. A. (2010) · Nature Biotechnology · doi:10.1038/nbt.1692 · Cited by 720 · see citing works
Resurrecting the Ancestral Steroid Receptor: Ancient Origin of Estrogen Signaling
Thornton, J. W., Need, E. F., & Crews, D. P. (2003) · Science · doi:10.1126/science.1086185 · Cited by 700 · see citing works
Tillberg, P. W., Chen, F., Piatkevich, K. D., Zhao, Y., Yu, C.-C., English, B. P., Gao, L. A., Martorell, A. J., Suk, H., Yoshida, F., et al. (2016) · Nature Biotechnology · doi:10.1038/nbt.3625 · Cited by 673 · see citing works
DNA rendering of polyhedral meshes at the nanoscale
Benson, E., Mohammed, A., Gardell, J., Masich, S., Czeizler, E., Orponen, P., & Högberg, B. (2015) · Nature · doi:10.1038/nature14586 · Cited by 672 · see citing works
Shah, S., Lubeck, E., Zhou, W., & Cai, L. (2016) · Neuron · doi:10.1016/j.neuron.2016.10.001 · Cited by 671 · see citing works
DNA Origami as an In Vivo Drug Delivery Vehicle for Cancer Therapy
Zhang, Q., Jiang, Q., Li, N., Dai, L., Liu, Q. L., Song, L., Wang, J., Li, Y., Tian, J., Ding, B., et al. (2014) · ACS Nano · doi:10.1021/nn502058j · Cited by 648 · see citing works
An Enhanced System for Unnatural Amino Acid Mutagenesis in E. coli
Young, T. S., Ahmad, I., Yin, J., & Schultz, P. G. (2009) · Journal of Molecular Biology · doi:10.1016/j.jmb.2009.10.030 · Cited by 638 · see citing works
Next-Generation in Situ Hybridization Chain Reaction: Higher Gain, Lower Cost, Greater Durability
Choi, H. M. T., Beck, V. A., & Pierce, N. A. (2014) · ACS Nano · doi:10.1021/nn405717p · Cited by 634 · see citing works
In Situ Probing of Newly Synthesized Peptidoglycan in Live Bacteria with Fluorescent D ‐Amino Acids
Kuru, E., Hughes, V., Brown, P., Hall, E. A., Tekkam, S., Cava, F., de Pedro, M. A., Brun, Y. V., & VanNieuwenhze, M. S. (2012) · Angewandte Chemie International Edition · doi:10.1002/anie.201206749 · Cited by 629 · see citing works
Designer nanoscale DNA assemblies programmed from the top down
Veneziano, R., Ratanalert, S., Zhang, K., Zhang, F., Yan, H., Chiu, W., & Bathe, M. (2016) · Science · doi:10.1126/science.aaf4388 · Cited by 624 · see citing works
A semi-synthetic organism with an expanded genetic alphabet
Malyshev, D. A., Dhami, K., Lavergne, T., Chen, T., Dai, N., Foster, J. M., Junior, I. R. C., & Romesberg, F. E. (2014) · Nature · doi:10.1038/nature13314 · Cited by 614 · see citing works
Advances and Applications of Single-Cell Sequencing Technologies
Wang, Y., & Navin, N. E. (2015) · Molecular Cell · doi:10.1016/j.molcel.2015.05.005 · Cited by 610 · see citing works
Self-citationGenome-wide inactivation of porcine endogenous retroviruses (PERVs)
Yang, L., Güell, M., Niu, D., George, H., Lesha, E., Grishin, D., Aach, J., Shrock, E. L., Xu, W., Poci, J., et al. (2015) · Science · doi:10.1126/science.aad1191 · Cited by 604 · see citing works
Self-citationDemeule, M., Currie, J., Bertrand, Y., Ché, C., Nguyen, T., Régina, A., Gabathuler, R., Castaigne, J., & Béliveau, R. (2008) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.2008.05492.x · Cited by 557 · see citing works
Moffitt, J. R., Hao, J., Wang, G., Chen, K. H., Babcock, H. P., & Zhuang, X. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1612826113 · Cited by 557 · see citing works
Precise Manipulation of Chromosomes in Vivo Enables Genome-Wide Codon Replacement
Isaacs, F. J., Carr, P. A., Wang, H. H., Lajoie, M. J., Sterling, B., Kraal, L., Tolonen, A. C., Gianoulis, T. A., Goodman, D. B., Reppas, N. B., et al. (2011) · Science · doi:10.1126/science.1205822 · Cited by 550 · see citing works
Self-citationTotal Synthesis of a Functional Designer Eukaryotic Chromosome
Annaluru, N., Muller, H., MITCHELL, L. A., Ramalingam, S., Stracquadanio, G., Richardson, S. M., Dymond, J. S., Kuang, Z., Scheifele, L. Z., Cooper, E. M., et al. (2014) · Science · doi:10.1126/science.1249252 · Cited by 547 · see citing works
Tobias, J. W., Shrader, T. E., Rocap, G., & Varshavsky, A. J. (1991) · Science · doi:10.1126/science.1962196 · Cited by 542 · see citing works
Design of a synthetic yeast genome
Richardson, S., Mitchell, L., Stracquadanio, G., Yang, K., Dymond, J. S., DiCarlo, J., Lee, D., Huang, C., Chandrasegaran, S., Cai, Y.-Z., et al. (2017) · Science · doi:10.1126/science.aaf4557 · Cited by 536 · see citing works
Lee, J. H., Daugharthy, E. R., Scheiman, J., Kalhor, R., Ferrante, T. C., Terry, R., Turczyk, B. M., Yang, J. L., Lee, H. S., Aach, J., et al. (2015) · Nature Protocols · doi:10.1038/nprot.2014.191 · Cited by 529 · see citing works
Self-citationVirus-Inspired Membrane Encapsulation of DNA Nanostructures To Achieve In Vivo Stability
Perrault, S. D., & Shih, W. M. (2014) · ACS Nano · doi:10.1021/nn5011914 · Cited by 524 · see citing works
DNA Origami Delivery System for Cancer Therapy with Tunable Release Properties
Zhao, Y., SHAW, A. R., Zeng, X., Benson, E., Nyström, A. M., & Högberg, B. (2012) · ACS Nano · doi:10.1021/nn3022662 · Cited by 522 · see citing works
Spatially resolved transcriptomics and beyond
Crosetto, N., Bienko, M., & van Oudenaarden, A. (2015) · Nature Reviews Genetics · doi:10.1038/nrg3832 · Cited by 509 · see citing works
Ponnuswamy, N., Bastings, M. M. C., Nathwani, B., Ryu, J. H., Chou, L. Y. T., Vinther, M., Li, A. W., Anastassacos, F. M., Mooney, D. J., & Shih, W. M. (2017) · Nature Communications · doi:10.1038/ncomms15654 · Cited by 509 · see citing works
Designing logical codon reassignment – Expanding the chemistry in biology
Dumas, A., Lercher, L., Spicer, C. D., & Davis, B. G. (2014) · Chemical Science · doi:10.1039/c4sc01534g · Cited by 487 · see citing works
Expanding and Reprogramming the Genetic Code of Cells and Animals
Chin, J. W. (2014) · Annual Review of Biochemistry · doi:10.1146/annurev-biochem-060713-035737 · Cited by 476 · see citing works
Biocontainment of genetically modified organisms by synthetic protein design
Mandell, D. J., Lajoie, M. J., Mee, M. T., Takeuchi, R., Kuznetsov, G., Norville, J. E., Gregg, C. J., Stoddard, B. L., & Church, G. M. (2015) · Nature · doi:10.1038/nature14121 · Cited by 474 · see citing works
Self-citationSingle-cell systems biology by super-resolution imaging and combinatorial labeling
Lubeck, E., & Cai, L. (2012) · Nature Methods · doi:10.1038/nmeth.2069 · Cited by 462 · see citing works
‘Omic’ technologies: genomics, transcriptomics, proteomics and metabolomics
Horgan, R., & Kenny, L. C. (2011) · The Obstetrician & Gynaecologist · doi:10.1576/toag.13.3.189.27672 · Cited by 461 · see citing works
Translation Elongation Factor EF-P Alleviates Ribosome Stalling at Polyproline Stretches
Ude, S., Lassak, J., Starosta, A. L., Kraxenberger, T., Wilson, D. N., & Jung, K. (2012) · Science · doi:10.1126/science.1228985 · Cited by 460 · see citing works
Integrating ‘omic’ information: a bridge between genomics and systems biology
Ge, H., Walhout, A. J. M., & Vidal, M. (2003) · Trends in Genetics · doi:10.1016/j.tig.2003.08.009 · Cited by 434 · see citing works
Complex wireframe DNA origami nanostructures with multi-arm junction vertices
Zhang, F., Jiang, S., Wu, S., Li, Y., Mao, C., Liu, Y., & Yan, H. (2015) · Nature Nanotechnology · doi:10.1038/nnano.2015.162 · Cited by 415 · see citing works
Multilayer DNA Origami Packed on a Square Lattice
Ke, Y., Douglas, S. M., Liu, M., Sharma, J., Cheng, A., Leung, A., Liu, Y., Shih, W. M., & Yan, H. (2009) · Journal of the American Chemical Society · doi:10.1021/ja906381y · Cited by 414 · see citing works
Refactoring the nitrogen fixation gene cluster from Klebsiella oxytoca
Temme, K., Zhao, D., & Voigt, C. A. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1120788109 · Cited by 414 · see citing works
Nanoscale imaging of RNA with expansion microscopy
Chen, F., Wassie, A. T., Coté, A., Sinha, A., Alon, S., Asano, S. M., Daugharthy, E. R., Chang, J., Marblestone, A. H., Church, G. M., et al. (2016) · Nature Methods · doi:10.1038/nmeth.3899 · Cited by 411 · see citing works
Self-citationResurrecting ancient genes: experimental analysis of extinct molecules
Thornton, J. W. (2004) · Nature Reviews Genetics · doi:10.1038/nrg1324 · Cited by 399 · see citing works
Kosuri, S., Goodman, D. B., Cambray, G., Mutalik, V. K., Gao, Y., Arkin, A. P., Endy, D., & Church, G. M. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1301301110 · Cited by 392 · see citing works
Self-citationIterative expansion microscopy
Chang, J., Chen, F., Yoon, Y., Jung, E. E., Babcock, H. P., Kang, J. S., Asano, S. M., Suk, H., Pak, N., Tillberg, P. W., et al. (2017) · Nature Methods · doi:10.1038/nmeth.4261 · Cited by 390 · see citing works
Tasaki, T., Sriram, S. M., Park, K. S., & Kwon, Y. T. (2012) · Annual Review of Biochemistry · doi:10.1146/annurev-biochem-051710-093308 · Cited by 382 · see citing works
High-throughput mapping of single-neuron projections by sequencing of barcoded RNA
Kebschull, J. M., Garcia da Silva, P., Reid, A. P., Peikon, I. D., Albeanu, D. F., & Zador, A. M. (2016) · Neuron · doi:10.1016/j.neuron.2016.07.036 · Cited by 376 · see citing works
Quantitative prediction of 3D solution shape and flexibility of nucleic acid nanostructures
Kim, D., Kilchherr, F., Dietz, H., & Bathe, M. (2011) · Nucleic Acids Research · doi:10.1093/nar/gkr1173 · Cited by 374 · see citing works
Zimmerman, E. S., Heibeck, T. H., Gill, A., Li, X., Murray, C. J., Madlansacay, M. R., Tran, C., Uter, N. T., Yin, G., Rivers, P. J., et al. (2014) · Bioconjugate Chemistry · doi:10.1021/bc400490z · Cited by 367 · see citing works
Recoded organisms engineered to depend on synthetic amino acids
Rovner, A. J., Haimovich, A. D., Katz, S. R., Li, Z., Grome, M. W., Gassaway, B. M., Amiram, M., Patel, J. R., Gallagher, R. R., Rinehart, J., et al. (2015) · Nature · doi:10.1038/nature14095 · Cited by 366 · see citing works
CRISPR-Cas Encoding of a Digital Movie into the Genomes of a Population of Living Bacteria
Shipman, S. L., Nivala, J., Macklis, J. D., & Church, G. M. (2017) · Nature · doi:10.1038/nature23017 · Cited by 361 · see citing works
Self-citationScaffolded DNA Origami of a DNA Tetrahedron Molecular Container
Ke, Y., Sharma, J., Liu, M., Jahn, K., Liu, Y., & Yan, H. (2009) · Nano Letters · doi:10.1021/nl901165f · Cited by 343 · see citing works
Synthesis and Accumulation of Aromatic Aldehydes in an Engineered Strain of Escherichia coli
Kunjapur, A. M., Tarasova, Y., & Prather, K. L. J. (2014) · Journal of the American Chemical Society · doi:10.1021/ja506664a · Cited by 330 · see citing works
Self-citationFolding and cutting DNA into reconfigurable topological nanostructures
Han, D., Pal, S., Liu, Y., & Yan, H. (2010) · Nature Nanotechnology · doi:10.1038/nnano.2010.193 · Cited by 329 · see citing works
Moffitt, J. R., Hao, J., Bambah-Mukku, D., Lu, T., Dulac, C., & Zhuang, X. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1617699113 · Cited by 308 · see citing works
Assembly of a novel biosynthetic pathway for gentamicin B production in Micromonospora echinospora
Ni, X., Sun, Z., Gu, Y., Cui, H., & Xia, H. (2016) · Microbial Cell Factories · doi:10.1186/s12934-015-0402-6 · Cited by 291 · see citing works
Design, synthesis, and testing toward a 57-codon genome
Ostrov, N., Landon, M., Güell, M., Kuznetsov, G., Teramoto, J., Cervantes, N., Zhou, M. H., Singh, K., Napolitano, M. G., Moosburner, M., et al. (2016) · Science · doi:10.1126/science.aaf3639 · Cited by 289 · see citing works
Self-citationGeneration of a Bacterium with a 21 Amino Acid Genetic Code
Mehl, R. A., Anderson, J. C., Santoro, S. W., Wang, L., Martin, A., King, D., Horn, D. M., & Schultz, P. G. (2003) · Journal of the American Chemical Society · doi:10.1021/ja0284153 · Cited by 287 · see citing works
Rapid Folding of DNA into Nanoscale Shapes at Constant Temperature
Sobczak, J.-P. J., Martin, T. G., Gerling, T., & Dietz, H. (2012) · Science · doi:10.1126/science.1229919 · Cited by 285 · see citing works
Liu, Y., Huang, R., Han, L., Ke, W., Shao, K., Ye, L., Lou, J., & Jiang, C. (2009) · Biomaterials · doi:10.1016/j.biomaterials.2009.02.051 · Cited by 281 · see citing works
Mapping a multiplexed zoo of mRNA expression
Choi, H. M. T., Calvert, C. R., Husain, N., Huss, D. J., Barsi, J. C., Deverman, B. E., Hunter, R. C., Kato, M., Lee, S. M., Abelin, A. C. T., et al. (2016) · Development · doi:10.1242/dev.140137 · Cited by 271 · see citing works
DNA Gridiron Nanostructures Based on Four-Arm Junctions
Han, D., Pal, S., Yang, Y., Jiang, S., Nangreave, J., Liu, Y., & Yan, H. (2013) · Science · doi:10.1126/science.1232252 · Cited by 268 · see citing works
Tugyi, R., Uray, K., Iván, D., et al. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0407677102 · Cited by 265 · see citing works
Facile and Scalable Preparation of Pure and Dense DNA Origami Solutions
Stahl, E., Martin, T. G., Praetorius, F., & Dietz, H. (2014) · Angewandte Chemie International Edition · doi:10.1002/anie.201405991 · Cited by 263 · see citing works
“Perfect” designer chromosome V and behavior of a ring derivative.
Xie, Z.-X., Li, B.-Z., Mitchell, L. A., Wu, Y., Qi, X., Jin, Z., Jia, B., Wang, X., Zeng, B.-X., Liu, H.-M., et al. (2017) · Science · doi:10.1126/science.aaf4704 · Cited by 255 · see citing works
Self-citationLopez, P. J., Marchand, I., Joyce, S. A., & Dreyfus, M. (1999) · Molecular Microbiology · doi:10.1046/j.1365-2958.1999.01465.x · Cited by 249 · see citing works
Regenesis: how synthetic biology will reinvent nature and ourselves
(2013) · Choice Reviews Online · doi:10.5860/choice.50-3835 · Cited by 243 · see citing works
Bug mapping and fitness testing of chemically synthesized chromosome X
Wu, Y., Li, B., Zhao, M., MITCHELL, L. A., Xie, Z., Lin, Q.-H., Wang, X., Xiao, W., Wāng, Y., Zhou, X., et al. (2017) · Science · doi:10.1126/science.aaf4706 · Cited by 239 · see citing works
Engineering the ribosomal DNA in a megabase synthetic chromosome
Zhang, W., Zhao, G., Luo, Z., Lin, Y., Wang, L., Guo, Y., Wang, A., Jiang, S., Jiang, Q., Gong, J., et al. (2017) · Science · doi:10.1126/science.aaf3981 · Cited by 232 · see citing works
Self-citationHalley, P. D., Lucas, C. R., McWilliams, E. M., Webber, M. J., Patton, R. A., Kural, C., Lucas, D. M., Byrd, J. C., & Castro, C. E. (2015) · Small · doi:10.1002/smll.201502118 · Cited by 225 · see citing works
Nanoscale imaging of clinical specimens using pathology-optimized expansion microscopy
Zhao, Y., Bucur, O., Irshad, H., Chen, F., Weins, A., Stancu, A. L., Oh, E.-Y., DiStasio, M., Torous, V. F., Glass, B., et al. (2017) · Nature Biotechnology · doi:10.1038/nbt.3892 · Cited by 224 · see citing works
Boeke, J. D., Church, G. M., Hessel, A., Kelley, N. J., Arkin, A. P., Cai, Y., Carlson, R. H., Chakravarti, A., Cornish, V. W., Holt, L. J., et al. (2016) · Science · doi:10.1126/science.aaf6850 · Cited by 219 · see citing works
Self-citationSynthesis, debugging, and effects of synthetic chromosome consolidation: synVI and beyond
MITCHELL, L. A., Wang, A., Stracquadanio, G., Kuang, Z., Wang, X., Yang, K., Richardson, S. M., Martin, J. A., Zhao, Y., Walker, R. S. K., et al. (2017) · Science · doi:10.1126/science.aaf4831 · Cited by 218 · see citing works
Nanoparticle-Mediated Brain-Specific Drug Delivery, Imaging, and Diagnosis
Yang, H. (2010) · Pharmaceutical Research · doi:10.1007/s11095-010-0141-7 · Cited by 210 · see citing works
Shah, S., Lubeck, E., Schwarzkopf, M., He, T.-F., Greenbaum, A., Sohn, C. H., Lignell, A., Choi, H. M. T., Gradinaru, V., Pierce, N. A., et al. (2016) · Development · doi:10.1242/dev.138560 · Cited by 210 · see citing works
A synthetic molecular system capable of mirror-image genetic replication and transcription
Wang, Z., Xu, W., Liu, L., & Zhu, T. F. (2016) · Nature Chemistry · doi:10.1038/nchem.2517 · Cited by 209 · see citing works
Deep functional analysis of synII, a 770-kilobase synthetic yeast chromosome.
Shen, Y., Wang, Y., Chen, T., Gao, F., Gong, J., Abramczyk, D., Walker, R., Zhao, H., Chen, S., Liu, W., et al. (2017) · Science · doi:10.1126/science.aaf4791 · Cited by 202 · see citing works
Self-citationA YY1-binding site is required for accurate human LINE-1 transcription initiation
Athanikar, J. N. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh698 · Cited by 200 · see citing works
DNA-barcoded labeling probes for highly multiplexed Exchange-PAINT imaging
Agasti, S. S., Wang, Y., Schueder, F., Sukumar, A., Jungmann, R., & Yin, P. (2017) · Chemical Science · doi:10.1039/c6sc05420j · Cited by 200 · see citing works
Self-citationOptimized clinical performance of growth hormone with an expanded genetic code
Cho, H., Daniel, T. S., Buechler, Y. J., Litzinger, D. C., Maio, Z., Hays, A. A., Kraynov, V. S., Sim, B.-C., Bussell, S., Javahishvili, T., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1100387108 · Cited by 199 · see citing works
Comparison of five different targeting ligands to enhance accumulation of liposomes into the brain
van Rooy, I., Mastrobattista, E., Storm, G., Hennink, W. E., & Schiffelers, R. M. (2010) · Journal of Controlled Release · doi:10.1016/j.jconrel.2010.11.014 · Cited by 188 · see citing works
Design and construction of a box-shaped 3D-DNA origami
Kuzuya, A., & Komiyama, M. (2009) · Chemical Communications · doi:10.1039/b907800b · Cited by 187 · see citing works
Magnesium-free self-assembly of multi-layer DNA objects
Martin, T. G., & Dietz, H. (2012) · Nature Communications · doi:10.1038/ncomms2095 · Cited by 184 · see citing works
Liu, Y., Li, J., Shao, K., Huang, R., Ye, L., Lou, J., & Jiang, C. (2010) · Biomaterials · doi:10.1016/j.biomaterials.2010.03.011 · Cited by 172 · see citing works
Defining synonymous codon compression schemes by genome recoding
Wang, K., Fredens, J., Brunner, S. F., Kim, S. H., Chia, T., & Chin, J. W. (2016) · Nature · doi:10.1038/nature20124 · Cited by 172 · see citing works
Purification of DNA-origami nanostructures by rate-zonal centrifugation
Lin, C., Perrault, S. D., Kwak, M., et al. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks1070 · Cited by 161 · see citing works
Recombinant expression of selectively sulfated proteins in Escherichia coli
Liu, C. C., & Schultz, P. G. (2006) · Nature Biotechnology · doi:10.1038/nbt1254 · Cited by 157 · see citing works
Enhanced d -Amino Acid Incorporation into Protein by Modified Ribosomes
Dedkova, L. M., Fahmi, N. E., Golovine, S. Y., & Hecht, S. M. (2003) · Journal of the American Chemical Society · doi:10.1021/ja035141q · Cited by 157 · see citing works
In vivo degradation of secreted fusion proteins by the Escherichia coli outer membrane protease OmpT
Baneyx, F., & Georgiou, G. N. (1990) · Journal of Bacteriology · doi:10.1128/jb.172.1.491-494.1990 · Cited by 156 · see citing works
Evolution of Alu Elements toward Enhancers
Su, M., Han, D., Boyd-Kirkup, J. D., Yu, X., & Han, J.-D. J. (2014) · Cell Reports · doi:10.1016/j.celrep.2014.03.011 · Cited by 151 · see citing works
Hubisz, M. J., & Pollard, K. S. (2014) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2014.07.005 · Cited by 146 · see citing works
Rapid Sequential in Situ Multiplexing with DNA Exchange Imaging in Neuronal Cells and Tissues
Wang, Y., Woehrstein, J. B., Donoghue, N. D., Dai, M., Avendaño, M. S., Schackmann, R. C. J., Zoeller, J. J., Wang, S. S. H., Tillberg, P. W., Park, D., et al. (2017) · Nano Letters · doi:10.1021/acs.nanolett.7b02716 · Cited by 146 · see citing works
Self-citationReevaluation of the d -Amino Acid Compatibility with the Elongation Event in Translation
Fujino, T., Goto, Y., Suga, H., et al. (2013) · Journal of the American Chemical Society · doi:10.1021/ja309570x · Cited by 144 · see citing works
Toward aldehyde and alkane production by removing aldehyde reductase activity in Escherichia coli
Rodriguez, G. M., & Atsumi, S. (2014) · Metabolic Engineering · doi:10.1016/j.ymben.2014.07.012 · Cited by 144 · see citing works
Multilayer DNA Origami Packed on Hexagonal and Hybrid Lattices
Ke, Y., Voigt, N. V., Gothelf, K. V., & Shih, W. M. (2011) · Journal of the American Chemical Society · doi:10.1021/ja209719k · Cited by 139 · see citing works
3D organization of synthetic and scrambled chromosomes
Mercy, G., Mozziconacci, J., Scolari, V. F., Yang, K., Zhao, G., Thierry, A., Luo, Y., MITCHELL, L. A., Shen, M. J., Shen, Y., et al. (2017) · Science · doi:10.1126/science.aaf4597 · Cited by 134 · see citing works
Xin, H., Sha, X., Jiang, X., Chen, L., Law, K., Gu, J., Chen, Y., Wang, X., & Fang, X. (2011) · Biomaterials · doi:10.1016/j.biomaterials.2011.11.018 · Cited by 131 · see citing works
Purification of Functionalized DNA Origami Nanostructures
SHAW, A. R., Benson, E., & Högberg, B. (2015) · ACS Nano · doi:10.1021/nn507035g · Cited by 131 · see citing works
Biogenesis of d ‐amino acid containing peptides/proteins: where, when and how?
Ollivaux, C., Soyez, D., & Toullec, J. (2014) · Journal of Peptide Science · doi:10.1002/psc.2637 · Cited by 130 · see citing works
Synthesis of DNA/RNA and Their Analogs via Phosphoramidite and H-Phosphonate Chemistries
Roy, S., & Caruthers, M. H. (2013) · Molecules · doi:10.3390/molecules181114268 · Cited by 124 · see citing works
Efficient Production of Single-Stranded Phage DNA as Scaffolds for DNA Origami
Kick, B., Praetorius, F., Dietz, H., & Weuster‐Botz, D. (2015) · Nano Letters · doi:10.1021/acs.nanolett.5b01461 · Cited by 120 · see citing works
A novel peptide defined through phage display for therapeutic protein and vector neuronal targeting
Liu, J. K., Teng, Q., Garrity‐Moses, M. E., Federici, T., Tănase, D., Imperiale, M. J., & Boulis, N. M. (2005) · Neurobiology of Disease · doi:10.1016/j.nbd.2005.01.022 · Cited by 119 · see citing works
Consecutive Elongation of D-Amino Acids in Translation
Katoh, T., Tajima, K., & Suga, H. (2016) · Cell chemical biology · doi:10.1016/j.chembiol.2016.11.012 · Cited by 119 · see citing works
Kunjapur, A. M., Hyun, J. C., & Prather, K. L. J. (2016) · Microbial Cell Factories · doi:10.1186/s12934-016-0459-x · Cited by 116 · see citing works
Self-citationLight-Triggered Release of Bioactive Molecules from DNA Nanostructures
Kohman, R. E., Cha, S. S., Man, H., et al. (2016) · Nano Letters · doi:10.1021/acs.nanolett.6b00530 · Cited by 113 · see citing works
Self-citationAdaptive evolution of genomically recoded Escherichia coli
Wannier, T. M., Kunjapur, A. M., Rice, D. P., McDonald, M. J., Desai, M. M., & Church, G. M. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1715530115 · Cited by 107 · see citing works
Self-citationImproving Nature's Enzyme Active Site with Genetically Encoded Unnatural Amino Acids
Jackson, J. C., Duffy, S. P., Hess, K. R., et al. (2006) · Journal of the American Chemical Society · doi:10.1021/ja061099y · Cited by 102 · see citing works
Tetanus toxin C fragment-conjugated nanoparticles for targeted drug delivery to neurons
Townsend, S. A., Evrony, G. D., Gu, F., Schulz, M. P., Brown, R. H., & Langer, R. (2007) · Biomaterials · doi:10.1016/j.biomaterials.2007.08.011 · Cited by 101 · see citing works
Improving a Natural Enzyme Activity through Incorporation of Unnatural Amino Acids
Ugwumba, I. N., Ozawa, K., Xu, Z., Ely, F., Foo, J. L., Herlt, A. J., Coppin, C. W., Brown, S., Taylor, M. C., Ollis, D. L., et al. (2010) · Journal of the American Chemical Society · doi:10.1021/ja106416g · Cited by 100 · see citing works
Assembly and Purification of Enzyme‐Functionalized DNA Origami Structures
Timm, C., & Niemeyer, C. M. (2015) · Angewandte Chemie International Edition · doi:10.1002/anie.201500175 · Cited by 99 · see citing works
Bacterial Recombineering: Genome Engineering via Phage-Based Homologous Recombination
Pines, G., Freed, E. F., Winkler, J. D., & Gill, R. T. (2015) · ACS Synthetic Biology · doi:10.1021/acssynbio.5b00009 · Cited by 98 · see citing works
Qian, Y. J., Zha, Y., Feng, B. C., Pang, Z., Zhang, B., Sun, X., Ren, J., Zhang, C., Shao, X., Zhang, Q., et al. (2012) · Biomaterials · doi:10.1016/j.biomaterials.2012.11.050 · Cited by 97 · see citing works
Recovery of intact DNA nanostructures after agarose gel–based separation
Bellot, G., McClintock, M. A., Lin, C., et al. (2011) · Nature Methods · doi:10.1038/nmeth0311-192 · Cited by 95 · see citing works
Universal Super‐Resolution Multiplexing by DNA Exchange
Schueder, F., Strauss, M. T., Hörl, D., Schnitzbauer, J., Schlichthaerle, T., Strauss, S., Yin, P., Harz, H., Leonhardt, H., & Jungmann, R. (2017) · Angewandte Chemie International Edition · doi:10.1002/anie.201611729 · Cited by 95 · see citing works
Self‐Assembly of DNA Origami and Single‐Stranded Tile Structures at Room Temperature
Zhang, Z., Song, J., Besenbacher, F., Dong, M., & Gothelf, K. V. (2013) · Angewandte Chemie International Edition · doi:10.1002/anie.201303611 · Cited by 76 · see citing works
Dense transcript profiling in single cells by image correlation decoding
Coskun, A. F., & Cai, L. (2016) · Nature Methods · doi:10.1038/nmeth.3895 · Cited by 74 · see citing works
Zilhão, R., Cairrão, F., Régnier, P., et al. (1996) · Molecular Microbiology · doi:10.1111/j.1365-2958.1996.tb02544.x · Cited by 72 · see citing works
Virus-Derived Peptides for Clinical Applications
Yang, M., Sunderland, K. S., & Mao, C. (2017) · Chemical Reviews · doi:10.1021/acs.chemrev.7b00100 · Cited by 68 · see citing works
Multiplexed In Situ Immunofluorescence Using Dynamic DNA Complexes
Schweller, R. M., Zimak, J., Duose, D. Y., Qutub, A. A., Hittelman, W. N., & Diehl, M. R. (2012) · Angewandte Chemie International Edition · doi:10.1002/anie.201204304 · Cited by 66 · see citing works
Design and Synthesis of Triangulated DNA Origami Trusses
Matthies, M., Agarwal, N. P., & Schmidt, T. L. (2016) · Nano Letters · doi:10.1021/acs.nanolett.6b00381 · Cited by 64 · see citing works
Emergent rules for codon choice elucidated by editing rare arginine codons in Escherichia coli
Napolitano, M. G., Landon, M., Gregg, C. J., Lajoie, M. J., Govindarajan, L. N., Mosberg, J. A., Kuznetsov, G., Goodman, D. B., Vargas‐Rodriguez, O., Isaacs, F. J., et al. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1605856113 · Cited by 61 · see citing works
Self-citationOutwitting EF-Tu and the ribosome: translation with d-amino acids
Achenbach, J., Jahnz, M., Bethge, L., et al. (2015) · Nucleic Acids Research · doi:10.1093/nar/gkv566 · Cited by 60 · see citing works
Light sensitization of DNA nanostructures via incorporation of photo-cleavable spacers
Kohman, R. E., & Han, X. F. (2015) · Chemical Communications · doi:10.1039/c5cc00082c · Cited by 60 · see citing works
Self-citationSaiSree, L., Reddy, M., & Gowrishankar, J. (2001) · Journal of Bacteriology · doi:10.1128/jb.183.23.6943-6946.2001 · Cited by 59 · see citing works
Facile and Scalable Preparation of Pure and Dense DNA Origami Solutions
Stahl, E., Martin, T. G., Praetorius, F., & Dietz, H. (2014) · Angewandte Chemie · doi:10.1002/ange.201405991 · Cited by 57 · see citing works
Genomic Recoding Broadly Obstructs the Propagation of Horizontally Transferred Genetic Elements
Ma, N. J., & Isaacs, F. J. (2016) · Cell Systems · doi:10.1016/j.cels.2016.06.009 · Cited by 55 · see citing works
Performance Analysis of Orthogonal Pairs Designed for an Expanded Eukaryotic Genetic Code
Nehring, S., Budiša, N., & Wiltschi, B. (2012) · PLoS ONE · doi:10.1371/journal.pone.0031992 · Cited by 52 · see citing works
In Situ Probing of Newly Synthesized Peptidoglycan in Live Bacteria with Fluorescent D ‐Amino Acids
Kuru, E., Hughes, V., Brown, P., Hall, E. A., Tekkam, S., Cava, F., de Pedro, M. A., Brun, Y. V., & VanNieuwenhze, M. S. (2012) · Angewandte Chemie · doi:10.1002/ange.201206749 · Cited by 52 · see citing works
Bethencourt, V. (2009) · Nature Biotechnology · doi:10.1038/nbt0809-681a · Cited by 51 · see citing works
Engineering posttranslational proofreading to discriminate nonstandard amino acids
Kunjapur, A. M., Stork, D. A., Kuru, E., Vargas‐Rodriguez, O., Landon, M., Söll, D. G., & Church, G. M. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1715137115 · Cited by 47 · see citing works
Self-citationMutagenesis and Evolution of Sulfated Antibodies Using an Expanded Genetic Code
Liu, C. C., Choe, H., Farzan, M., Smider, V. V., & Schultz, P. G. (2009) · Biochemistry · doi:10.1021/bi9011429 · Cited by 44 · see citing works
Suzuki, T., Kazuki, Y., Oshimura, M., et al. (2016) · PLoS ONE · doi:10.1371/journal.pone.0157187 · Cited by 42 · see citing works
Drug delivery in overcoming the blood–brain barrier: role of nasal mucosal grafting
Marianecci, C., Rinaldi, F., Hanieh, P. N., Marzio, L. D., Paolino, D., & Carafa, M. (2017) · Drug Design Development and Therapy · doi:10.2147/dddt.s100075 · Cited by 40 · see citing works
Bleier, B. S., Kohman, R. E., Feldman, R. E., Ramanlal, S. B., & Han, X. (2013) · PLoS ONE · doi:10.1371/journal.pone.0061694 · Cited by 38 · see citing works
Self-citationRecruiting Cytotoxic T Cells to Folate‐Receptor‐Positive Cancer Cells
Kularatne, S. A., Deshmukh, V. A., Gymnopoulos, M., Biroc, S. L., Xia, J., Srinagesh, S., Sun, Y. J., Zou, N., Shimazu, M., Pinkstaff, J. K., et al. (2013) · Angewandte Chemie International Edition · doi:10.1002/anie.201306866 · Cited by 38 · see citing works
Extending enzyme molecular recognition with an expanded amino acid alphabet
Windle, C. L., Simmons, K. J., Ault, J. R., Trinh, C. H., Nelson, A. S., Pearson, A. R., & Berry, A. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1616816114 · Cited by 38 · see citing works
Using high-throughput barcode sequencing to efficiently map connectomes
Peikon, I. D., Kebschull, J. M., Vagin, V. V., Ravens, D. I., Sun, Y.-C., Brouzes, E. R., Junior, I. R. C., Bressan, D., & Zador, A. M. (2017) · Nucleic Acids Research · doi:10.1093/nar/gkx292 · Cited by 38 · see citing works
Rapid and Inexpensive Evaluation of Nonstandard Amino Acid Incorporation in Escherichia coli
Monk, J. W., Leonard, S. P., Brown, C. W., Hammerling, M. J., Mortensen, C., Gutierrez, A. E., Shin, N. Y., Watkins‐Dulaney, E. J., Mishler, D. M., & Barrick, J. E. (2016) · ACS Synthetic Biology · doi:10.1021/acssynbio.6b00192 · Cited by 33 · see citing works
Optimizing complex phenotypes through model-guided multiplex genome engineering
Kuznetsov, G., Goodman, D. B., Filsinger, G. T., Landon, M., Rohland, N., Aach, J., Lajoie, M. J., & Church, G. M. (2017) · Genome biology · doi:10.1186/s13059-017-1217-z · Cited by 32 · see citing works
Self-citationOki, K., Sakamoto, K., Kobayashi, T., Sasaki, H. M., & Yokoyama, S. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0803531105 · Cited by 31 · see citing works
Ambush hypothesis revisited: Evidences for phylogenetic trends
Singh, T. R., & Pardasani, K. R. (2009) · Computational Biology and Chemistry · doi:10.1016/j.compbiolchem.2009.04.002 · Cited by 30 · see citing works
Self‐Assembly of DNA Origami and Single‐Stranded Tile Structures at Room Temperature
Zhang, Z., Song, J., Besenbacher, F., Dong, M., & Gothelf, K. V. (2013) · Angewandte Chemie · doi:10.1002/ange.201303611 · Cited by 24 · see citing works
Multiplexed single-cell in situ RNA analysis by reiterative hybridization
Xiao, L., & Guo, J. (2015) · Analytical Methods · doi:10.1039/c5ay00500k · Cited by 22 · see citing works
Evolution of DNA origami scaffolds
Chandrasekaran, A. R., Muthuirulan, P., & Halvorsen, K. (2016) · Materials Letters · doi:10.1016/j.matlet.2016.01.161 · Cited by 22 · see citing works
Importance of single molecular determinants in the fidelity of expanded genetic codes
Antonczak, A. K., Šimová, Z., Yonemoto, I. T., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1012276108 · Cited by 21 · see citing works
Bleier, B. S., Kohman, R. E., Guerra, K., Nocera, A. L., Ramanlal, S. B., Kocharyan, A. H., Curry, W. T., & Han, X. (2015) · Neurosurgery · doi:10.1227/neu.0000000000001016 · Cited by 18 · see citing works
Self-citationGrass, R. N., Heckel, R., Puddu, M., Păunescu, D., & Stark, W. J. (2015) · Angewandte Chemie · doi:10.1002/ange.201411378 · Cited by 14 · see citing works
Assembly and Purification of Enzyme‐Functionalized DNA Origami Structures
Timm, C., & Niemeyer, C. M. (2015) · Angewandte Chemie · doi:10.1002/ange.201500175 · Cited by 13 · see citing works
Multiplexed In Situ Immunofluorescence Using Dynamic DNA Complexes
Schweller, R. M., Zimak, J., Duose, D. Y., Qutub, A. A., Hittelman, W. N., & Diehl, M. R. (2012) · Angewandte Chemie · doi:10.1002/ange.201204304 · Cited by 11 · see citing works
Recruiting Cytotoxic T Cells to Folate‐Receptor‐Positive Cancer Cells
Kularatne, S. A., Deshmukh, V. A., Gymnopoulos, M., Biroc, S. L., Xia, J., Srinagesh, S., Sun, Y. J., Zou, N., Shimazu, M., Pinkstaff, J. K., et al. (2013) · Angewandte Chemie · doi:10.1002/ange.201306866 · Cited by 9 · see citing works
Universelles Superauflösungs‐Multiplexing durch DNA‐Austausch
Schueder, F., Strauss, M. T., Hoerl, D., et al. (2017) · Angewandte Chemie · doi:10.1002/ange.201611729 · Cited by 8 · see citing works
Multicellularity Driven by Bacteria
Carpenter, J. (2012) · Science · doi:10.1126/science.337.6094.510 · Cited by 4 · see citing works
Huang, P.-Y., Wang, F., Narasimhan, K., et al. (2017) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/125930 · Cited by 4 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Song, L.-F., Deng, Z.-H., Gong, Z.-Y., Li, L.-L., & Li, B.-Z. (2021) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2021.689797 · Cited by 74 · see citing works
- Authors
- Kohman, R. E., Kunjapur, A. M., Hysolli, E., Wang, Y., & Church, G. M.
- Affiliations
- Harvard University (US)
- Corresponding author
- Church, George M.
- Venue
- Angewandte Chemie International Edition
- Publisher
- Wiley
- Published
- 2018-02-23
- Volume
- 57
- Issue
- 16
- Pages
- 4313-4328
- ISSN
- 1433-7851 (ISSN-L)
- 1521-3773
- OpenAlex
- W2790279918
- Cited by
- 33
- References
- 183
- Citations by year
- 2026: 1 · 2025: 3 · 2024: 2 · 2023: 2 · 2022: 1 · 2021: 5 · 2020: 5 · 2019: 8 · 2018: 5
- FWCI
- 0.56
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Angewandte Chemie International Edition (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Advanced biosensing and bioanalysis techniques
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA and Nucleic Acid Chemistry
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › CRISPR and Genetic Engineering
- Keywords
- DNA technology, DNA-based materials, genome editing, synthetic biology, genome sequencing, evolution, DNA barcoding, DNA synthesis
- MeSH terms
- Biotechnology, DNA, Genome, Evolution, Molecular, Life
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review